RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 PLCG1P19174 1290 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 BNC2Q6ZN30 1099 aaPredicted RBP8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 KSR1Q8IVT5 923 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 PPP1R13LQ8WUF5 828 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 CYB5D2Q8WUJ1 264 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 KIRREL1Q96J84 757 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 FAM84AQ96KN4 292 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 RHOVQ96L33 236 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 Q96M66 194 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 RSRP1Q9BUV0 290 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 PF4P02776 101 aa8.68□□□□□ -1.02
SMCHD1-202ENST00000577300 ITGAEP38570 1179 aa8.68□□□□□ -1.02
SMCHD1-202ENST00000577300 PWP1Q13610 501 aa8.68□□□□□ -1.02
SMCHD1-202ENST00000577300 BHLHE22Q8NFJ8 381 aaPredicted RBP8.68□□□□□ -1.02
SMCHD1-202ENST00000577300 TMEM74Q96NL1 305 aa8.68□□□□□ -1.02
SMCHD1-202ENST00000577300 SLC38A3Q99624 504 aa8.68□□□□□ -1.02
SMCHD1-202ENST00000577300 PRR36Q9H6K5 1346 aa8.68□□□□□ -1.02
SMCHD1-202ENST00000577300 DBX1A6NMT0 343 aa8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 RBAK-RBAKDNI3L0D1 243 aa8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 F13A1P00488 732 aa8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 ESR1P03372 595 aa8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 YARSP54577 528 aaKnown RBP8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 ZNF124Q15973 351 aa8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 PKN1Q16512 942 aa8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 RELL1Q8IUW5 271 aa8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 FAM13CQ8NE31 585 aa8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 MRS2Q9HD23 443 aa8.67□□□□□ -1.02
SMCHD1-202ENST00000577300 TAGLNQ01995 201 aaKnown RBP8.66□□□□□ -1.02
SMCHD1-202ENST00000577300 MLANAQ16655 118 aa8.66□□□□□ -1.02
SMCHD1-202ENST00000577300 SLFN12Q8IYM2 578 aa8.66□□□□□ -1.02
SMCHD1-202ENST00000577300 LIN37Q96GY3 246 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-202ENST00000577300 DUSP15Q9H1R2 295 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-202ENST00000577300 TRIT1Q9H3H1 467 aaKnown RBP8.66□□□□□ -1.02
SMCHD1-202ENST00000577300 VTI1BQ9UEU0 232 aa8.66□□□□□ -1.02
SMCHD1-202ENST00000577300 UPK3BL1B0FP48 263 aa8.65□□□□□ -1.02
SMCHD1-202ENST00000577300 UPK3BL2E5RIL1 263 aa8.65□□□□□ -1.02
SMCHD1-202ENST00000577300 F6X3S4 739 aa8.65□□□□□ -1.02
SMCHD1-202ENST00000577300 SRFP11831 508 aa8.65□□□□□ -1.02
SMCHD1-202ENST00000577300 GBP2P32456 591 aaPredicted RBP8.65□□□□□ -1.02
SMCHD1-202ENST00000577300 GAB4Q2WGN9 574 aa8.65□□□□□ -1.02
SMCHD1-202ENST00000577300 TMEM67Q5HYA8 995 aa8.65□□□□□ -1.02
SMCHD1-202ENST00000577300 GPR62Q9BZJ7 368 aa8.65□□□□□ -1.02
SMCHD1-202ENST00000577300 SLAMF8Q9P0V8 285 aa8.65□□□□□ -1.02
SMCHD1-202ENST00000577300 CCDC27Q2M243 656 aa8.64□□□□□ -1.03
SMCHD1-202ENST00000577300 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
SMCHD1-202ENST00000577300 TMEM59LQ9UK28 342 aa8.64□□□□□ -1.03
SMCHD1-202ENST00000577300 KCNH3Q9ULD8 1083 aa8.64□□□□□ -1.03
SMCHD1-202ENST00000577300 TPP2P29144 1249 aaPredicted RBP8.63□□□□□ -1.03
SMCHD1-202ENST00000577300 MPP2Q14168 576 aa8.63□□□□□ -1.03
SMCHD1-202ENST00000577300 TTC6Q86TZ1 520 aa8.63□□□□□ -1.03
SMCHD1-202ENST00000577300 CREG2Q8IUH2 290 aa8.63□□□□□ -1.03
SMCHD1-202ENST00000577300 DTWD2Q8NBA8 298 aa8.63□□□□□ -1.03
SMCHD1-202ENST00000577300 GPATCH2Q9NW75 528 aa8.63□□□□□ -1.03
SMCHD1-202ENST00000577300 REV1Q9UBZ9 1251 aa8.63□□□□□ -1.03
SMCHD1-202ENST00000577300 POLR3KQ9Y2Y1 108 aaPredicted RBP8.63□□□□□ -1.03
SMCHD1-202ENST00000577300 DNAJC25-GNG10A0A024R161 153 aa8.62□□□□□ -1.03
SMCHD1-202ENST00000577300 RALGPS1Q5JS13 557 aa8.62□□□□□ -1.03
SMCHD1-202ENST00000577300 MPZL3Q6UWV2 235 aa8.62□□□□□ -1.03
SMCHD1-202ENST00000577300 WASH4PA8MWX3 477 aa8.61□□□□□ -1.03
SMCHD1-202ENST00000577300 HTR3BO95264 441 aa8.61□□□□□ -1.03
SMCHD1-202ENST00000577300 RAC2P15153 192 aa8.61□□□□□ -1.03
SMCHD1-202ENST00000577300 GARTP22102 1010 aa8.61□□□□□ -1.03
SMCHD1-202ENST00000577300 SNAP47Q5SQN1 464 aa8.61□□□□□ -1.03
SMCHD1-202ENST00000577300 PRR23BQ6ZRT6 265 aa8.61□□□□□ -1.03
SMCHD1-202ENST00000577300 REC114Q7Z4M0 266 aa8.61□□□□□ -1.03
SMCHD1-202ENST00000577300 TSPYL5Q86VY4 417 aaPredicted RBP8.61□□□□□ -1.03
SMCHD1-202ENST00000577300 GOLM1Q8NBJ4 401 aa8.61□□□□□ -1.03
SMCHD1-202ENST00000577300 FAM160A1Q05DH4 1040 aa8.6□□□□□ -1.03
SMCHD1-202ENST00000577300 ERMP1Q7Z2K6 904 aa8.6□□□□□ -1.03
SMCHD1-202ENST00000577300 ABHD4Q8TB40 342 aa8.6□□□□□ -1.03
SMCHD1-202ENST00000577300 CCDC74BQ96LY2 380 aa8.6□□□□□ -1.03
SMCHD1-202ENST00000577300 PPP1R16BQ96T49 567 aa8.6□□□□□ -1.03
SMCHD1-202ENST00000577300 DUSP13Q9UII6 198 aa8.6□□□□□ -1.03
SMCHD1-202ENST00000577300 MINDY4BA8MYZ0 360 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 CHURC1-FNTBB4DL54 471 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 GRIN3BO60391 1043 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 HPXP02790 462 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 FAM196AQ6ZSG2 479 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 ASPNQ9BXN1 380 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 ADAMTS10Q9H324 1103 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 KCNQ5Q9NR82 932 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 KLHL3Q9UH77 587 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 ROBO2Q9HCK4 1378 aa8.59□□□□□ -1.03
SMCHD1-202ENST00000577300 TSPAN15O95858 294 aa8.58□□□□□ -1.04
SMCHD1-202ENST00000577300 TNNI2P48788 182 aa8.58□□□□□ -1.04
SMCHD1-202ENST00000577300 BAHD1Q8TBE0 780 aaPredicted RBP8.58□□□□□ -1.04
SMCHD1-202ENST00000577300 KREMEN1Q96MU8 473 aa8.58□□□□□ -1.04
SMCHD1-202ENST00000577300 LRRC3Q9BY71 257 aa8.58□□□□□ -1.04
SMCHD1-202ENST00000577300 KBTBD4Q9NVX7 518 aa8.58□□□□□ -1.04
SMCHD1-202ENST00000577300 DNAJA2O60884 412 aa8.57□□□□□ -1.04
SMCHD1-202ENST00000577300 LRRN2O75325 713 aa8.57□□□□□ -1.04
SMCHD1-202ENST00000577300 HK2P52789 917 aa8.57□□□□□ -1.04
SMCHD1-202ENST00000577300 ERVFC1P60507 584 aa8.57□□□□□ -1.04
SMCHD1-202ENST00000577300 EGR3Q06889 387 aa8.57□□□□□ -1.04
SMCHD1-202ENST00000577300 FBXO27Q8NI29 283 aa8.57□□□□□ -1.04
SMCHD1-202ENST00000577300 MYLIPQ8WY64 445 aa8.57□□□□□ -1.04
SMCHD1-202ENST00000577300 RBM47A0AV96 593 aaKnown RBP8.56□□□□□ -1.04
SMCHD1-202ENST00000577300 RAP1GAPP47736 663 aa8.56□□□□□ -1.04
SMCHD1-202ENST00000577300 FBXL19Q6PCT2 694 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms