RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ARHGEF10LQ9HCE6 1279 aa18.22■□□□□ 0.51
SMG6-220ENST00000576218 MYH8P13535 1937 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 HOXD10P28358 340 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 PSMC4P43686 418 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 FCGRTP55899 365 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 ICA1Q05084 483 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 SBK1Q52WX2 424 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 CCDC129Q6ZRS4 1044 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 IFNL3Q8IZI9 196 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 ANKRD13CQ8N6S4 541 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 ARHGAP39Q9C0H5 1083 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 ASCC2Q9H1I8 757 aaPredicted RBP18.21■□□□□ 0.51
SMG6-220ENST00000576218 SH2D4AQ9H788 454 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 HELLSQ9NRZ9 838 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 DIAPH3Q9NSV4 1193 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 LOC285556D6RIA3 1793 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 ADGRA2Q96PE1 1338 aa18.21■□□□□ 0.51
SMG6-220ENST00000576218 RAD21O60216 631 aa18.2■□□□□ 0.5
SMG6-220ENST00000576218 GNRH1P01148 92 aa18.2■□□□□ 0.5
SMG6-220ENST00000576218 AKR1B1P15121 316 aa18.2■□□□□ 0.5
SMG6-220ENST00000576218 EPB41L4AQ9HCS5 686 aaPredicted RBP18.2■□□□□ 0.5
SMG6-220ENST00000576218 PTPN22Q9Y2R2 807 aa18.2■□□□□ 0.5
SMG6-220ENST00000576218 GCLCP48506 637 aaPredicted RBP18.19■□□□□ 0.5
SMG6-220ENST00000576218 MFAP1P55081 439 aaKnown RBP18.19■□□□□ 0.5
SMG6-220ENST00000576218 MCMDC2Q4G0Z9 681 aa18.19■□□□□ 0.5
SMG6-220ENST00000576218 CCAR1Q8IX12 1150 aaKnown RBP18.19■□□□□ 0.5
SMG6-220ENST00000576218 ACER1Q8TDN7 264 aa18.19■□□□□ 0.5
SMG6-220ENST00000576218 KIAA1683Q9H0B3 1180 aa18.19■□□□□ 0.5
SMG6-220ENST00000576218 OSBPL3Q9H4L5 887 aa18.19■□□□□ 0.5
SMG6-220ENST00000576218 HIP1O00291 1037 aa18.18■□□□□ 0.5
SMG6-220ENST00000576218 NEFLP07196 543 aa18.18■□□□□ 0.5
SMG6-220ENST00000576218 BCRP11274 1271 aa18.18■□□□□ 0.5
SMG6-220ENST00000576218 PDE4BQ07343 736 aa18.18■□□□□ 0.5
SMG6-220ENST00000576218 NMIQ13287 307 aaPredicted RBP18.18■□□□□ 0.5
SMG6-220ENST00000576218 FAM110CQ1W6H9 321 aa18.18■□□□□ 0.5
SMG6-220ENST00000576218 TICAM2Q86XR7 235 aa18.18■□□□□ 0.5
SMG6-220ENST00000576218 ZNF444Q8N0Y2 327 aaPredicted RBP18.18■□□□□ 0.5
SMG6-220ENST00000576218 FAM227BQ96M60 508 aa18.18■□□□□ 0.5
SMG6-220ENST00000576218 CWC22Q9HCG8 908 aaKnown RBP18.18■□□□□ 0.5
SMG6-220ENST00000576218 EMILIN3Q9NT22 766 aa18.18■□□□□ 0.5
SMG6-220ENST00000576218 A0A0D9SFI3 127 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 USP17L15C9J2P7 530 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 USP17L13C9JLJ4 530 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 USP17L11C9JVI0 530 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 USP17L18D6R9N7 530 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 USP17L22D6RA61 530 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 USP17L17D6RBQ6 530 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 USP17L19D6RCP7 530 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 USP17L20D6RJB6 530 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 SMIM22K7EJ46 135 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 TNPO2O14787 897 aaKnown RBP18.17■□□□□ 0.5
SMG6-220ENST00000576218 VCAM1P19320 739 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 GUCY1A2P33402 732 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 PRMT2P55345 433 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 USP17L24Q0WX57 530 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 SLC9C1Q4G0N8 1177 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 CLEC10AQ8IUN9 316 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 RAET1EQ8TD07 263 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 GTF3C2Q8WUA4 911 aaPredicted RBP18.17■□□□□ 0.5
SMG6-220ENST00000576218 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 MYPNQ86TC9 1320 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
SMG6-220ENST00000576218 PRDM1O75626 825 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 SDSP20132 328 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 HOXA7P31268 230 aaPredicted RBP18.16■□□□□ 0.5
SMG6-220ENST00000576218 SOX10P56693 466 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 HERVK_113P62684 666 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 PPARAQ07869 468 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 NBPF11Q86T75 865 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 COA7Q96BR5 231 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 TRIM47Q96LD4 638 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 C12orf42Q96LP6 360 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 PAGR1Q9BTK6 254 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 RPAP3Q9H6T3 665 aaPredicted RBP18.16■□□□□ 0.5
SMG6-220ENST00000576218 KANSL2Q9H9L4 492 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 PTCH2Q9Y6C5 1203 aa18.16■□□□□ 0.5
SMG6-220ENST00000576218 SAMD1Q6SPF0 538 aaPredicted RBP18.15■□□□□ 0.5
SMG6-220ENST00000576218 CWC27Q6UX04 472 aaKnown RBP18.15■□□□□ 0.5
SMG6-220ENST00000576218 P2RX7Q99572 595 aaKnown RBP18.15■□□□□ 0.5
SMG6-220ENST00000576218 GOPCQ9HD26 462 aa18.15■□□□□ 0.5
SMG6-220ENST00000576218 TOMM22Q9NS69 142 aa18.15■□□□□ 0.5
SMG6-220ENST00000576218 SRRDQ9UH36 339 aa18.15■□□□□ 0.5
SMG6-220ENST00000576218 CCDC171Q6TFL3 1326 aa18.15■□□□□ 0.5
SMG6-220ENST00000576218 TSPY3P0CV98 308 aa18.14■□□□□ 0.49
SMG6-220ENST00000576218 TSPY8P0CW00 308 aa18.14■□□□□ 0.49
SMG6-220ENST00000576218 RASA1P20936 1047 aa18.14■□□□□ 0.49
SMG6-220ENST00000576218 CAP1Q01518 475 aa18.14■□□□□ 0.49
SMG6-220ENST00000576218 SPICE1Q8N0Z3 855 aa18.14■□□□□ 0.49
SMG6-220ENST00000576218 BIN2Q9UBW5 565 aaPredicted RBP18.14■□□□□ 0.49
SMG6-220ENST00000576218 A0A1W2PRG0 241 aa18.13■□□□□ 0.49
SMG6-220ENST00000576218 EEF2P13639 858 aaKnown RBP18.13■□□□□ 0.49
SMG6-220ENST00000576218 PDE4AP27815 886 aa18.13■□□□□ 0.49
SMG6-220ENST00000576218 TTC22Q5TAA0 569 aa18.13■□□□□ 0.49
SMG6-220ENST00000576218 VPS53Q5VIR6 699 aa18.13■□□□□ 0.49
SMG6-220ENST00000576218 GPRC5AQ8NFJ5 357 aa18.13■□□□□ 0.49
SMG6-220ENST00000576218 LPAR1Q92633 364 aa18.13■□□□□ 0.49
SMG6-220ENST00000576218 ZSWIM8A7E2V4 1837 aa18.13■□□□□ 0.49
SMG6-220ENST00000576218 MYCP01106 439 aaPredicted RBP18.12■□□□□ 0.49
SMG6-220ENST00000576218 CTGFP29279 349 aa18.12■□□□□ 0.49
SMG6-220ENST00000576218 PRKCZQ05513 592 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms