RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TAOK2Q9UL54 1235 aa17.31■□□□□ 0.36
COMMD4-225ENST00000569245 GSG1L2A8MUP6 293 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 MINDY4BA8MYZ0 360 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 CTGFP29279 349 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 TDO2P48775 406 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 CDK8P49336 464 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 PRMT2P55345 433 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 TMEM179Q6ZVK1 233 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 RAET1EQ8TD07 263 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 ACER1Q8TDN7 264 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 SEC62Q99442 399 aaKnown RBP17.3■□□□□ 0.36
COMMD4-225ENST00000569245 SRRDQ9UH36 339 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 PHIPQ8WWQ0 1821 aa17.3■□□□□ 0.36
COMMD4-225ENST00000569245 TRIM6-TRIM34B2RNG4 842 aa17.29■□□□□ 0.36
COMMD4-225ENST00000569245 SMIM22K7EJ46 135 aa17.29■□□□□ 0.36
COMMD4-225ENST00000569245 TNPO2O14787 897 aaKnown RBP17.29■□□□□ 0.36
COMMD4-225ENST00000569245 HOXA7P31268 230 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-225ENST00000569245 GUCY1A2P33402 732 aa17.29■□□□□ 0.36
COMMD4-225ENST00000569245 MLLT1Q03111 559 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-225ENST00000569245 GIMAP6Q6P9H5 292 aa17.29■□□□□ 0.36
COMMD4-225ENST00000569245 C16orf86Q6ZW13 317 aa17.29■□□□□ 0.36
COMMD4-225ENST00000569245 STK11IPQ8N1F8 1099 aa17.29■□□□□ 0.36
COMMD4-225ENST00000569245 P2RX7Q99572 595 aaKnown RBP17.29■□□□□ 0.36
COMMD4-225ENST00000569245 NACAP1Q9BZK3 213 aa17.29■□□□□ 0.36
COMMD4-225ENST00000569245 KIAA1683Q9H0B3 1180 aa17.29■□□□□ 0.36
COMMD4-225ENST00000569245 NAV1Q8NEY1 1877 aa17.29■□□□□ 0.36
COMMD4-225ENST00000569245 MYPNQ86TC9 1320 aa17.28■□□□□ 0.36
COMMD4-225ENST00000569245 PATL2C9JE40 543 aaKnown RBP17.28■□□□□ 0.36
COMMD4-225ENST00000569245 MYCP01106 439 aaPredicted RBP17.28■□□□□ 0.36
COMMD4-225ENST00000569245 AKR1B1P15121 316 aa17.28■□□□□ 0.36
COMMD4-225ENST00000569245 RGS19P49795 217 aa17.28■□□□□ 0.36
COMMD4-225ENST00000569245 FAM110CQ1W6H9 321 aa17.28■□□□□ 0.36
COMMD4-225ENST00000569245 ZMYM1Q5SVZ6 1142 aa17.28■□□□□ 0.36
COMMD4-225ENST00000569245 ARMC5Q96C12 935 aa17.28■□□□□ 0.36
COMMD4-225ENST00000569245 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
COMMD4-225ENST00000569245 MKNK2Q9HBH9 465 aa17.28■□□□□ 0.36
COMMD4-225ENST00000569245 ATAD5Q96QE3 1844 aa17.28■□□□□ 0.36
COMMD4-225ENST00000569245 CENPFP49454 3210 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L15C9J2P7 530 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L13C9JLJ4 530 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L11C9JVI0 530 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L18D6R9N7 530 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L22D6RA61 530 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L17D6RBQ6 530 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L19D6RCP7 530 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L20D6RJB6 530 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 HERVK_113P62684 666 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 ATP2B2Q01814 1243 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 USP17L24Q0WX57 530 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 SBK1Q52WX2 424 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 TTC22Q5TAA0 569 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 SH3TC2Q8TF17 1288 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 RILPL2Q969X0 211 aa17.27■□□□□ 0.36
COMMD4-225ENST00000569245 ICA1Q05084 483 aa17.26■□□□□ 0.35
COMMD4-225ENST00000569245 PRKCZQ05513 592 aa17.26■□□□□ 0.35
COMMD4-225ENST00000569245 BMP2KLQ5H9B9 411 aa17.26■□□□□ 0.35
COMMD4-225ENST00000569245 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
COMMD4-225ENST00000569245 GPRC5AQ8NFJ5 357 aa17.26■□□□□ 0.35
COMMD4-225ENST00000569245 COA7Q96BR5 231 aa17.26■□□□□ 0.35
COMMD4-225ENST00000569245 C12orf42Q96LP6 360 aa17.26■□□□□ 0.35
COMMD4-225ENST00000569245 TMEM106CQ9BVX2 250 aa17.26■□□□□ 0.35
COMMD4-225ENST00000569245 ARHGEF10LQ9HCE6 1279 aa17.26■□□□□ 0.35
COMMD4-225ENST00000569245 BIN2Q9UBW5 565 aaPredicted RBP17.26■□□□□ 0.35
COMMD4-225ENST00000569245 DDX60LQ5H9U9 1706 aaKnown RBP17.25■□□□□ 0.35
COMMD4-225ENST00000569245 A0A1W2PRG0 241 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 VCAM1P19320 739 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 CCDC129Q6ZRS4 1044 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 CLEC10AQ8IUN9 316 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 ZNF333Q96JL9 665 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 PAGR1Q9BTK6 254 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 NAPBQ9H115 298 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 RPAP3Q9H6T3 665 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-225ENST00000569245 SH2D4AQ9H788 454 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 ZNF287Q9HBT7 754 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 EPB41L4AQ9HCS5 686 aaPredicted RBP17.25■□□□□ 0.35
COMMD4-225ENST00000569245 GABRQQ9UN88 632 aa17.25■□□□□ 0.35
COMMD4-225ENST00000569245 PTPRFP10586 1907 aa17.24■□□□□ 0.35
COMMD4-225ENST00000569245 MYH7P12883 1935 aa17.24■□□□□ 0.35
COMMD4-225ENST00000569245 FLT3LGP49771 235 aa17.24■□□□□ 0.35
COMMD4-225ENST00000569245 CATSPERGQ6ZRH7 1159 aa17.24■□□□□ 0.35
COMMD4-225ENST00000569245 ZNF444Q8N0Y2 327 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-225ENST00000569245 GTF3C2Q8WUA4 911 aaPredicted RBP17.24■□□□□ 0.35
COMMD4-225ENST00000569245 KANSL2Q9H9L4 492 aa17.24■□□□□ 0.35
COMMD4-225ENST00000569245 LOC285556D6RIA3 1793 aa17.23■□□□□ 0.35
COMMD4-225ENST00000569245 RAD21O60216 631 aa17.23■□□□□ 0.35
COMMD4-225ENST00000569245 PEX10O60683 326 aa17.23■□□□□ 0.35
COMMD4-225ENST00000569245 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
COMMD4-225ENST00000569245 GSPT1P15170 499 aaKnown RBP17.23■□□□□ 0.35
COMMD4-225ENST00000569245 GRK4P32298 578 aa17.23■□□□□ 0.35
COMMD4-225ENST00000569245 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
COMMD4-225ENST00000569245 CWC22Q9HCG8 908 aaKnown RBP17.23■□□□□ 0.35
COMMD4-225ENST00000569245 TXNRD2Q9NNW7 524 aa17.23■□□□□ 0.35
COMMD4-225ENST00000569245 HELLSQ9NRZ9 838 aa17.23■□□□□ 0.35
COMMD4-225ENST00000569245 RBPJLQ9UBG7 517 aa17.23■□□□□ 0.35
COMMD4-225ENST00000569245 MORF4L1Q9UBU8 362 aa17.23■□□□□ 0.35
COMMD4-225ENST00000569245 PRDM1O75626 825 aa17.22■□□□□ 0.35
COMMD4-225ENST00000569245 EEF2P13639 858 aaKnown RBP17.22■□□□□ 0.35
COMMD4-225ENST00000569245 SIAH1Q8IUQ4 282 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms