RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 FKBP1AP62942 108 aaKnown RBP7.57□□□□□ -1.2
CDH13-212ENST00000569144 SEMA3FQ13275 785 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 LRIT3Q3SXY7 679 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 RNF20Q5VTR2 975 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 C17orf99Q6UX52 265 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 Q7L0L9 218 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 TTLL11Q8NHH1 800 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 JARID2Q92833 1246 aaPredicted RBP7.57□□□□□ -1.2
CDH13-212ENST00000569144 ANKRD2Q9GZV1 360 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 GREM2Q9H772 168 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 CSADQ9Y600 493 aa7.57□□□□□ -1.2
CDH13-212ENST00000569144 UNC80Q8N2C7 3258 aa7.56□□□□□ -1.2
CDH13-212ENST00000569144 A6NJR5 290 aa7.56□□□□□ -1.2
CDH13-212ENST00000569144 POM121CA8CG34 1229 aa7.56□□□□□ -1.2
CDH13-212ENST00000569144 F8W031 263 aaPredicted RBP7.56□□□□□ -1.2
CDH13-212ENST00000569144 SOX11P35716 441 aa7.56□□□□□ -1.2
CDH13-212ENST00000569144 IGHMBP2P38935 993 aaKnown RBP7.56□□□□□ -1.2
CDH13-212ENST00000569144 TMPOP42166 694 aaKnown RBP7.56□□□□□ -1.2
CDH13-212ENST00000569144 SNAPC2Q13487 334 aa7.56□□□□□ -1.2
CDH13-212ENST00000569144 TEPSINQ96N21 525 aa7.56□□□□□ -1.2
CDH13-212ENST00000569144 BIN2Q9UBW5 565 aaPredicted RBP7.56□□□□□ -1.2
CDH13-212ENST00000569144 ADGRA2Q96PE1 1338 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 IRS2Q9Y4H2 1338 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 BMP1P13497 986 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 IL1R1P14778 569 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 KCNJ4P48050 445 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 RBM5P52756 815 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDH13-212ENST00000569144 C15orf52Q6ZUT6 534 aaKnown RBP7.55□□□□□ -1.2
CDH13-212ENST00000569144 ERO1BQ86YB8 467 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 METTL22Q9BUU2 404 aaPredicted RBP7.55□□□□□ -1.2
CDH13-212ENST00000569144 PCGF6Q9BYE7 350 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
CDH13-212ENST00000569144 ATP13A2Q9NQ11 1180 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 PRDM6Q9NQX0 595 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 ZNF70Q9UC06 446 aaPredicted RBP7.55□□□□□ -1.2
CDH13-212ENST00000569144 CPA4Q9UI42 421 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 SNCAIPQ9Y6H5 919 aa7.55□□□□□ -1.2
CDH13-212ENST00000569144 TNNI2P48788 182 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 PRKCZQ05513 592 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 CBLBQ13191 982 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 PPIL2Q13356 520 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 SLFNL1Q499Z3 407 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 DUSP27Q5VZP5 1158 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 ANKRD23Q86SG2 305 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 TDHQ8IZJ6 230 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 MPHOSPH8Q99549 860 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 ALG2Q9H553 416 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 SERPINA10Q9UK55 444 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 LAS1LQ9Y4W2 734 aaKnown RBP7.54□□□□□ -1.2
CDH13-212ENST00000569144 PCDHB11Q9Y5F2 797 aa7.54□□□□□ -1.2
CDH13-212ENST00000569144 RPTORQ8N122 1335 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 TCP10L2B9ZVM9 353 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 DDX58O95786 925 aaKnown RBP7.53□□□□□ -1.2
CDH13-212ENST00000569144 TFRCP02786 760 aaKnown RBP7.53□□□□□ -1.2
CDH13-212ENST00000569144 ITGA6P23229 1130 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 FCGRTP55899 365 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 CHRNDQ07001 517 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 TRIM46Q7Z4K8 759 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 ZNF804AQ7Z570 1209 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 NECAB2Q7Z6G3 386 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 RNF135Q8IUD6 432 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 C7orf61Q8IZ16 206 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 MEIOBQ8N635 442 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 PAWRQ96IZ0 340 aaKnown RBP7.53□□□□□ -1.2
CDH13-212ENST00000569144 TMEM39BQ9GZU3 492 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 TDRD3Q9H7E2 651 aaKnown RBP7.53□□□□□ -1.2
CDH13-212ENST00000569144 CYLDQ9NQC7 956 aa7.53□□□□□ -1.2
CDH13-212ENST00000569144 PAK6Q9NQU5 681 aaPredicted RBP7.53□□□□□ -1.2
CDH13-212ENST00000569144 GMPR2Q9P2T1 348 aaKnown RBP7.53□□□□□ -1.2
CDH13-212ENST00000569144 ZMYND8Q9ULU4 1186 aaPredicted RBP7.53□□□□□ -1.2
CDH13-212ENST00000569144 SPTBN5Q9NRC6 3674 aaKnown RBP7.53□□□□□ -1.2
CDH13-212ENST00000569144 FAM205AQ6ZU69 1335 aa7.52□□□□□ -1.2
CDH13-212ENST00000569144 SPEF2Q9C093 1822 aa7.52□□□□□ -1.2
CDH13-212ENST00000569144 PDHXO00330 501 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 ADCY3O60266 1144 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 INHAP05111 366 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 IGKV5-2P06315 115 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 BCRP11274 1271 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 MAGEA10P43363 369 aaPredicted RBP7.52□□□□□ -1.21
CDH13-212ENST00000569144 PPATQ06203 517 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 FAM109BQ6ICB4 259 aaPredicted RBP7.52□□□□□ -1.21
CDH13-212ENST00000569144 MRPL14Q6P1L8 145 aaKnown RBP7.52□□□□□ -1.21
CDH13-212ENST00000569144 DZIP1LQ8IYY4 767 aaKnown RBP7.52□□□□□ -1.21
CDH13-212ENST00000569144 ZKSCAN4Q969J2 545 aaPredicted RBP7.52□□□□□ -1.21
CDH13-212ENST00000569144 DEFB118Q96PH6 123 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 WRNIP1Q96S55 665 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 PARK7Q99497 189 aaKnown RBP7.52□□□□□ -1.21
CDH13-212ENST00000569144 PLA2G12BQ9BX93 195 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 GABRQQ9UN88 632 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 ARAP2Q8WZ64 1704 aa7.52□□□□□ -1.21
CDH13-212ENST00000569144 H7C1W4 665 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 SNAP23O00161 211 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 LILRA1O75019 489 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 ADD1P35611 737 aaKnown RBP7.51□□□□□ -1.21
CDH13-212ENST00000569144 Q6ZVU0 165 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 PHTF2Q8N3S3 785 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.51□□□□□ -1.21
CDH13-212ENST00000569144 ADAMTS19Q8TE59 1207 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 DIS3LQ8TF46 1054 aaKnown RBP7.51□□□□□ -1.21
CDH13-212ENST00000569144 HOOK2Q96ED9 719 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms