RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 GRB14Q14449 540 aa14.67□□□□□ -0.06
VPS9D1-207ENST00000568691 C1orf53Q5VUE5 145 aa14.67□□□□□ -0.06
VPS9D1-207ENST00000568691 CCDC102BQ68D86 513 aa14.67□□□□□ -0.06
VPS9D1-207ENST00000568691 ATF7IPQ6VMQ6 1270 aa14.67□□□□□ -0.06
VPS9D1-207ENST00000568691 EXOC6Q8TAG9 804 aa14.67□□□□□ -0.06
VPS9D1-207ENST00000568691 FERMT2Q96AC1 680 aa14.67□□□□□ -0.06
VPS9D1-207ENST00000568691 SLC15A5A6NIM6 579 aa14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 AKNAD1Q5T1N1 836 aa14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 C20orf194Q5TEA3 1177 aa14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 DZIP1Q86YF9 867 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 PRDM12Q9H4Q4 367 aa14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 AS3MTQ9HBK9 375 aa14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 BTBD7Q9P203 1132 aa14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 ABCF2Q9UG63 623 aa14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 PTPRCP08575 1304 aa14.66□□□□□ -0.06
VPS9D1-207ENST00000568691 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 KIAA0355O15063 1070 aa14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 BMP1P13497 986 aa14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 MRPS5P82675 430 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 LRRC41Q15345 812 aa14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 C16orf59Q7L2K0 433 aa14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 FTSJ3Q8IY81 847 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 FRAT1Q92837 279 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 TIFAQ96CG3 184 aa14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 CCDC136Q96JN2 1154 aa14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 GNL3LQ9NVN8 582 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 TMOD4Q9NZQ9 345 aa14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 RABGAP1Q9Y3P9 1069 aa14.65□□□□□ -0.06
VPS9D1-207ENST00000568691 C19orf81C9J6K1 198 aa14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 USP17L10C9JJH3 530 aa14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 TRIM27P14373 513 aa14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 ATP2B2Q01814 1243 aa14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 METTL16Q86W50 562 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 LRFN3Q9BTN0 628 aa14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 SIL1Q9H173 461 aa14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 EPHX3Q9H6B9 360 aa14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 HERC5Q9UII4 1024 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 ARIH1Q9Y4X5 557 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 PDS5AQ29RF7 1337 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-207ENST00000568691 GDF11O95390 407 aa14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 MVPQ14764 893 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 CCDC85BQ15834 202 aaPredicted RBP14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 FAM47AQ5JRC9 791 aa14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 PRAMEF19Q5SWL8 479 aa14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 RASIP1Q5U651 963 aa14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 PI16Q6UXB8 463 aa14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 ZGPATQ8N5A5 531 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 ARRDC4Q8NCT1 418 aa14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 NSUN4Q96CB9 384 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 PBX4Q9BYU1 374 aa14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 API5Q9BZZ5 524 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 CHMP4BQ9H444 224 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-207ENST00000568691 KBTBD13C9JR72 458 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 COBLO75128 1261 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 CIAO1O76071 339 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 ASNSP08243 561 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 CLTBP09497 229 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 CCAR1Q8IX12 1150 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 SH3RF3Q8TEJ3 882 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 GTF3C2Q8WUA4 911 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 C12orf42Q96LP6 360 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 C11orf16Q9NQ32 467 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 ZBTB21Q9ULJ3 1066 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 PHF24Q9UPV7 400 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 TACC3Q9Y6A5 838 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 MUC6Q6W4X9 2439 aa14.62□□□□□ -0.07
VPS9D1-207ENST00000568691 MYO9BQ13459 2157 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 SEPT4O43236 478 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 TIMM10P62072 90 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 TFF2Q03403 129 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 FPGSQ05932 587 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 OLFML2BQ68BL8 750 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 TBC1D9Q6ZT07 1266 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 SLF2Q8IX21 1173 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 KHSRPQ92945 711 aaKnown RBP eCLIP14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 C1QTNF1Q9BXJ1 281 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 CEP126Q9P2H0 1117 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 NOB1Q9ULX3 412 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 DDX19BQ9UMR2 479 aa14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 PA2G4Q9UQ80 394 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 TCF20Q9UGU0 1960 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-207ENST00000568691 RLBP1P12271 317 aa14.6□□□□□ -0.07
VPS9D1-207ENST00000568691 FAAP100Q0VG06 881 aa14.6□□□□□ -0.07
VPS9D1-207ENST00000568691 WDR78Q5VTH9 848 aa14.6□□□□□ -0.07
VPS9D1-207ENST00000568691 LBX2Q6XYB7 198 aa14.6□□□□□ -0.07
VPS9D1-207ENST00000568691 CATSPERGQ6ZRH7 1159 aa14.6□□□□□ -0.07
VPS9D1-207ENST00000568691 PANK1Q8TE04 598 aa14.6□□□□□ -0.07
VPS9D1-207ENST00000568691 CLUAP1Q96AJ1 413 aa14.6□□□□□ -0.07
VPS9D1-207ENST00000568691 GAS2L1Q99501 681 aaPredicted RBP14.6□□□□□ -0.07
VPS9D1-207ENST00000568691 PI4KBQ9UBF8 816 aa14.6□□□□□ -0.07
VPS9D1-207ENST00000568691 SPDYE16A6NNV3 312 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 MYCNP04198 464 aaPredicted RBP14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 RAG1P15918 1043 aa14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 KCNQ1P51787 676 aa14.59□□□□□ -0.07
VPS9D1-207ENST00000568691 TMEM240Q5SV17 173 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms