RNA–Protein interactions for RNA: ENST00000568656.5

NUP93-217, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-217ENST00000568656 ERO1AQ96HE7 468 aa11.15□□□□□ -0.62
NUP93-217ENST00000568656 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
NUP93-217ENST00000568656 IL25Q9H293 177 aa11.15□□□□□ -0.62
NUP93-217ENST00000568656 ZCCHC17Q9NP64 241 aaKnown RBP11.15□□□□□ -0.62
NUP93-217ENST00000568656 NAV1Q8NEY1 1877 aa11.15□□□□□ -0.63
NUP93-217ENST00000568656 BAZ2AQ9UIF9 1905 aaKnown RBP11.14□□□□□ -0.63
NUP93-217ENST00000568656 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
NUP93-217ENST00000568656 PSMC4P43686 418 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 ATP2B2Q01814 1243 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 Q3C1V9 767 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 FAM47AQ5JRC9 791 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 FBXO46Q6PJ61 603 aaPredicted RBP11.14□□□□□ -0.63
NUP93-217ENST00000568656 USP17L2Q6R6M4 530 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 CWC27Q6UX04 472 aaKnown RBP11.14□□□□□ -0.63
NUP93-217ENST00000568656 DDRGK1Q96HY6 314 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 PARK7Q99497 189 aaKnown RBP11.14□□□□□ -0.63
NUP93-217ENST00000568656 TXNRD2Q9NNW7 524 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 HELLSQ9NRZ9 838 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 GINM1Q9NU53 330 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 TMOD4Q9NZQ9 345 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 ARPP21Q9UBL0 812 aaPredicted RBP11.14□□□□□ -0.63
NUP93-217ENST00000568656 SWAP70Q9UH65 585 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 GABRQQ9UN88 632 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 PTPN22Q9Y2R2 807 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 PTCH2Q9Y6C5 1203 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 ATAD5Q96QE3 1844 aa11.14□□□□□ -0.63
NUP93-217ENST00000568656 C19orf81C9J6K1 198 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 FMNL1O95466 1100 aaPredicted RBP11.13□□□□□ -0.63
NUP93-217ENST00000568656 FGAP02671 866 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 EEF2P13639 858 aaKnown RBP11.13□□□□□ -0.63
NUP93-217ENST00000568656 GNAT2P19087 354 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 OSBPP22059 807 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 SOX10P56693 466 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 LRRFIP1Q32MZ4 808 aaKnown RBP11.13□□□□□ -0.63
NUP93-217ENST00000568656 MCMDC2Q4G0Z9 681 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 TTC22Q5TAA0 569 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 GIMAP6Q6P9H5 292 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 SPICE1Q8N0Z3 855 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 SMCR8Q8TEV9 937 aaPredicted RBP11.13□□□□□ -0.63
NUP93-217ENST00000568656 CHMP4CQ96CF2 233 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 FEZ1Q99689 392 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 NAPBQ9H115 298 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 MKNK2Q9HBH9 465 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 RBPJLQ9UBG7 517 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 SLC45A1Q9Y2W3 748 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 MYH7P12883 1935 aa11.13□□□□□ -0.63
NUP93-217ENST00000568656 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
NUP93-217ENST00000568656 VCAM1P19320 739 aa11.12□□□□□ -0.63
NUP93-217ENST00000568656 HOXA7P31268 230 aaPredicted RBP11.12□□□□□ -0.63
NUP93-217ENST00000568656 HAND2P61296 217 aa11.12□□□□□ -0.63
NUP93-217ENST00000568656 HERVK_113P62684 666 aa11.12□□□□□ -0.63
NUP93-217ENST00000568656 PPARAQ07869 468 aa11.12□□□□□ -0.63
NUP93-217ENST00000568656 CATSPERGQ6ZRH7 1159 aa11.12□□□□□ -0.63
NUP93-217ENST00000568656 TMEM179Q6ZVK1 233 aa11.12□□□□□ -0.63
NUP93-217ENST00000568656 AMOTL1Q8IY63 956 aa11.12□□□□□ -0.63
NUP93-217ENST00000568656 KIAA1683Q9H0B3 1180 aa11.12□□□□□ -0.63
NUP93-217ENST00000568656 RPAP3Q9H6T3 665 aaPredicted RBP11.12□□□□□ -0.63
NUP93-217ENST00000568656 NMT2O60551 498 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 CNMDO75829 334 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 IRX3P78415 501 aaPredicted RBP11.11□□□□□ -0.63
NUP93-217ENST00000568656 ICA1Q05084 483 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 PRKCZQ05513 592 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 KIF22Q14807 665 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 PKN2Q16513 984 aaKnown RBP11.11□□□□□ -0.63
NUP93-217ENST00000568656 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
NUP93-217ENST00000568656 SH3TC2Q8TF17 1288 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 C12orf42Q96LP6 360 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 PAGR1Q9BTK6 254 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 NBPF3Q9H094 633 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 PTPRFP10586 1907 aa11.11□□□□□ -0.63
NUP93-217ENST00000568656 IGKV6D-41A0A0C4DH26 115 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 USP17L15C9J2P7 530 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 USP17L13C9JLJ4 530 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 USP17L11C9JVI0 530 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 USP17L18D6R9N7 530 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 USP17L22D6RA61 530 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 USP17L17D6RBQ6 530 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 USP17L19D6RCP7 530 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 USP17L20D6RJB6 530 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 RAD21O60216 631 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 TFAP4Q01664 338 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 USP17L24Q0WX57 530 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 ZNF444Q8N0Y2 327 aaPredicted RBP11.1□□□□□ -0.63
NUP93-217ENST00000568656 NUP88Q99567 741 aaPredicted RBP11.1□□□□□ -0.63
NUP93-217ENST00000568656 NACAP1Q9BZK3 213 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 PORCNQ9H237 461 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 FBXO28Q9NVF7 368 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 BTBD7Q9P203 1132 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 CLIP2Q9UDT6 1046 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 SRRDQ9UH36 339 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.1□□□□□ -0.63
NUP93-217ENST00000568656 TMX2Q9Y320 296 aa11.1□□□□□ -0.63
NUP93-217ENST00000568656 CCDC171Q6TFL3 1326 aa11.09□□□□□ -0.63
NUP93-217ENST00000568656 LOC285556D6RIA3 1793 aa11.09□□□□□ -0.63
NUP93-217ENST00000568656 ROBO3Q96MS0 1386 aa11.09□□□□□ -0.63
NUP93-217ENST00000568656 USP14P54578 494 aa11.09□□□□□ -0.63
NUP93-217ENST00000568656 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
NUP93-217ENST00000568656 ALX1Q15699 326 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms