RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 NUCB1Q02818 461 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 STK3Q13188 491 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 TRIM14Q14142 442 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 ABTB2Q8N961 1025 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 GTF2A1LQ9UNN4 478 aa12.59□□□□□ -0.39
UBFD1-205ENST00000566136 MON2Q7Z3U7 1717 aa12.58□□□□□ -0.39
UBFD1-205ENST00000566136 TCEA2Q15560 299 aa12.58□□□□□ -0.4
UBFD1-205ENST00000566136 RIC8AQ9NPQ8 531 aa12.58□□□□□ -0.4
UBFD1-205ENST00000566136 OBP2AQ9NY56 170 aa12.58□□□□□ -0.4
UBFD1-205ENST00000566136 PRKAG3Q9UGI9 489 aa12.58□□□□□ -0.4
UBFD1-205ENST00000566136 ECE1P42892 770 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 MORC3Q14149 939 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 GALEQ14376 348 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 TAF1CQ15572 869 aaPredicted RBP12.57□□□□□ -0.4
UBFD1-205ENST00000566136 FAM102BQ5T8I3 360 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 CFAP161Q6P656 301 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 ATF7IPQ6VMQ6 1270 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 DDX20Q9UHI6 824 aaKnown RBP12.57□□□□□ -0.4
UBFD1-205ENST00000566136 PHRF1Q9P1Y6 1649 aaKnown RBP12.57□□□□□ -0.4
UBFD1-205ENST00000566136 ZNF700Q9H0M5 742 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 RWDD1Q9H446 243 aaPredicted RBP12.57□□□□□ -0.4
UBFD1-205ENST00000566136 FAM13BQ9NYF5 915 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 AKAP12Q02952 1782 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
UBFD1-205ENST00000566136 STRN3Q13033 797 aa12.56□□□□□ -0.4
UBFD1-205ENST00000566136 CHAF1AQ13111 956 aaPredicted RBP12.56□□□□□ -0.4
UBFD1-205ENST00000566136 SEPT2Q15019 361 aa12.56□□□□□ -0.4
UBFD1-205ENST00000566136 DNAJC21Q5F1R6 531 aaKnown RBP12.56□□□□□ -0.4
UBFD1-205ENST00000566136 ZCCHC8Q6NZY4 707 aaKnown RBP12.56□□□□□ -0.4
UBFD1-205ENST00000566136 SMAP1Q8IYB5 467 aaPredicted RBP12.56□□□□□ -0.4
UBFD1-205ENST00000566136 TMEM57Q8N5G2 664 aa12.56□□□□□ -0.4
UBFD1-205ENST00000566136 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
UBFD1-205ENST00000566136 SHDQ96IW2 340 aa12.56□□□□□ -0.4
UBFD1-205ENST00000566136 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.4
UBFD1-205ENST00000566136 STRN4Q9NRL3 753 aa12.56□□□□□ -0.4
UBFD1-205ENST00000566136 A0A1W2PRQ8 180 aa12.56□□□□□ -0.4
UBFD1-205ENST00000566136 SEC24BO95487 1268 aa12.56□□□□□ -0.4
UBFD1-205ENST00000566136 LARP1BQ659C4 914 aaKnown RBP12.56□□□□□ -0.4
UBFD1-205ENST00000566136 DEFB132Q7Z7B7 95 aa12.56□□□□□ -0.4
UBFD1-205ENST00000566136 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
UBFD1-205ENST00000566136 USP17L7P0C7H9 530 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 GLIPR1L2Q4G1C9 344 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 COBLL1Q53SF7 1204 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 C16orf46Q6P387 395 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 C1orf228Q6PIY5 440 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 TNS4Q8IZW8 715 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 AFAP1L2Q8N4X5 818 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 SERINC2Q96SA4 455 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 ANKIB1Q9P2G1 1089 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 FAM182BQ5T319 152 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 ZNF513Q8N8E2 541 aaPredicted RBP12.55□□□□□ -0.4
UBFD1-205ENST00000566136 ENAHQ8N8S7 591 aaPredicted RBP12.55□□□□□ -0.4
UBFD1-205ENST00000566136 TSPAN10Q9H1Z9 355 aaPredicted RBP12.55□□□□□ -0.4
UBFD1-205ENST00000566136 PLCB1Q9NQ66 1216 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 ATG3Q9NT62 314 aa12.55□□□□□ -0.4
UBFD1-205ENST00000566136 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
UBFD1-205ENST00000566136 BICDL2A1A5D9 508 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 MYBP10242 640 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 NAT2P11245 290 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 TSPYL6Q8N831 410 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 TTC21BQ7Z4L5 1316 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 ALG1L2C9J202 215 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 FBXL19Q6PCT2 694 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 TCEAL8Q8IYN2 117 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 OSGEPQ9NPF4 335 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 USP19O94966 1318 aa12.54□□□□□ -0.4
UBFD1-205ENST00000566136 A0A1W2PRU2 124 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 FBXO24O75426 580 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
UBFD1-205ENST00000566136 PICALMQ13492 652 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 PJA1Q8NG27 643 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 LRGUKQ96M69 825 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 CSRNP1Q96S65 589 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 TARS2Q9BW92 718 aaKnown RBP12.53□□□□□ -0.4
UBFD1-205ENST00000566136 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 MCM8Q9UJA3 840 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 PNMA3Q9UL41 463 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 NRKQ7Z2Y5 1582 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 KIF16BQ96L93 1317 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 MTA2O94776 668 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 GRM3Q14832 879 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 ATP13A4Q4VNC1 1196 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 GPATCH4Q5T3I0 446 aaKnown RBP12.53□□□□□ -0.4
UBFD1-205ENST00000566136 KRT77Q7Z794 578 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 ADAM32Q8TC27 787 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 MAGED1Q9Y5V3 778 aaPredicted RBP12.53□□□□□ -0.4
UBFD1-205ENST00000566136 SPATA31A1Q5TZJ5 1347 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
UBFD1-205ENST00000566136 CBFA2T2O43439 604 aa12.52□□□□□ -0.4
UBFD1-205ENST00000566136 GCP02774 474 aa12.52□□□□□ -0.4
UBFD1-205ENST00000566136 PRKAR2AP13861 404 aaKnown RBP12.52□□□□□ -0.4
UBFD1-205ENST00000566136 USP6P35125 1406 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms