RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ASCC2Q9H1I8 757 aaPredicted RBP21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 MGAMO43451 1857 aa21.98■■□□□ 1.11
SYNGR3-204ENST00000564642 PATL2C9JE40 543 aaKnown RBP21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 HOXA7P31268 230 aaPredicted RBP21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 GCLCP48506 637 aaPredicted RBP21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 PRMT2P55345 433 aa21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 FCGRTP55899 365 aa21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 SBK1Q52WX2 424 aa21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 ZMYM1Q5SVZ6 1142 aa21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 TMEM179Q6ZVK1 233 aa21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 C16orf86Q6ZW13 317 aa21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 CCDC17Q96LX7 622 aa21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 EMILIN3Q9NT22 766 aa21.97■■□□□ 1.11
SYNGR3-204ENST00000564642 MINDY4BA8MYZ0 360 aa21.96■■□□□ 1.11
SYNGR3-204ENST00000564642 GUCY1A2P33402 732 aa21.96■■□□□ 1.11
SYNGR3-204ENST00000564642 TDO2P48775 406 aa21.96■■□□□ 1.11
SYNGR3-204ENST00000564642 TRIM47Q96LD4 638 aa21.96■■□□□ 1.11
SYNGR3-204ENST00000564642 NACAP1Q9BZK3 213 aa21.96■■□□□ 1.11
SYNGR3-204ENST00000564642 PTCH2Q9Y6C5 1203 aa21.96■■□□□ 1.11
SYNGR3-204ENST00000564642 TRIM6-TRIM34B2RNG4 842 aa21.95■■□□□ 1.1
SYNGR3-204ENST00000564642 SMIM22K7EJ46 135 aa21.95■■□□□ 1.1
SYNGR3-204ENST00000564642 CTGFP29279 349 aa21.95■■□□□ 1.1
SYNGR3-204ENST00000564642 SOX10P56693 466 aa21.95■■□□□ 1.1
SYNGR3-204ENST00000564642 PRPF38BQ5VTL8 546 aaKnown RBP21.95■■□□□ 1.1
SYNGR3-204ENST00000564642 NBPF11Q86T75 865 aa21.95■■□□□ 1.1
SYNGR3-204ENST00000564642 ACER1Q8TDN7 264 aa21.95■■□□□ 1.1
SYNGR3-204ENST00000564642 KIAA1683Q9H0B3 1180 aa21.95■■□□□ 1.1
SYNGR3-204ENST00000564642 AKR1B1P15121 316 aa21.94■■□□□ 1.1
SYNGR3-204ENST00000564642 FAM110CQ1W6H9 321 aa21.94■■□□□ 1.1
SYNGR3-204ENST00000564642 SLC9C1Q4G0N8 1177 aa21.94■■□□□ 1.1
SYNGR3-204ENST00000564642 RILPL2Q969X0 211 aa21.94■■□□□ 1.1
SYNGR3-204ENST00000564642 C12orf42Q96LP6 360 aa21.94■■□□□ 1.1
SYNGR3-204ENST00000564642 SRRDQ9UH36 339 aa21.94■■□□□ 1.1
SYNGR3-204ENST00000564642 PLEKHM2Q8IWE5 1019 aa21.93■■□□□ 1.1
SYNGR3-204ENST00000564642 IFNL3Q8IZI9 196 aa21.93■■□□□ 1.1
SYNGR3-204ENST00000564642 STK11IPQ8N1F8 1099 aa21.93■■□□□ 1.1
SYNGR3-204ENST00000564642 P2RX7Q99572 595 aaKnown RBP21.93■■□□□ 1.1
SYNGR3-204ENST00000564642 MKNK2Q9HBH9 465 aa21.93■■□□□ 1.1
SYNGR3-204ENST00000564642 MYPNQ86TC9 1320 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 USP17L15C9J2P7 530 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 USP17L13C9JLJ4 530 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 USP17L11C9JVI0 530 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 USP17L18D6R9N7 530 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 USP17L22D6RA61 530 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 USP17L17D6RBQ6 530 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 USP17L19D6RCP7 530 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 USP17L20D6RJB6 530 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 USP17L24Q0WX57 530 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 TICAM2Q86XR7 235 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 RAET1EQ8TD07 263 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 OSBPL3Q9H4L5 887 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 ARHGEF10LQ9HCE6 1279 aa21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 EPB41L4AQ9HCS5 686 aaPredicted RBP21.92■■□□□ 1.1
SYNGR3-204ENST00000564642 TNPO2O14787 897 aaKnown RBP21.91■■□□□ 1.1
SYNGR3-204ENST00000564642 HERVK_113P62684 666 aa21.91■■□□□ 1.1
SYNGR3-204ENST00000564642 ICA1Q05084 483 aa21.91■■□□□ 1.1
SYNGR3-204ENST00000564642 ARMC5Q96C12 935 aa21.91■■□□□ 1.1
SYNGR3-204ENST00000564642 NAPBQ9H115 298 aa21.91■■□□□ 1.1
SYNGR3-204ENST00000564642 ZNF287Q9HBT7 754 aa21.91■■□□□ 1.1
SYNGR3-204ENST00000564642 HELLSQ9NRZ9 838 aa21.91■■□□□ 1.1
SYNGR3-204ENST00000564642 A0A1W2PRG0 241 aa21.9■■□□□ 1.1
SYNGR3-204ENST00000564642 CCDC129Q6ZRS4 1044 aa21.9■■□□□ 1.1
SYNGR3-204ENST00000564642 GTF3C2Q8WUA4 911 aaPredicted RBP21.9■■□□□ 1.1
SYNGR3-204ENST00000564642 COA7Q96BR5 231 aa21.9■■□□□ 1.1
SYNGR3-204ENST00000564642 SH2D4AQ9H788 454 aa21.9■■□□□ 1.1
SYNGR3-204ENST00000564642 VCAM1P19320 739 aa21.89■■□□□ 1.09
SYNGR3-204ENST00000564642 PRKCZQ05513 592 aa21.89■■□□□ 1.09
SYNGR3-204ENST00000564642 CATSPERGQ6ZRH7 1159 aa21.89■■□□□ 1.09
SYNGR3-204ENST00000564642 KANSL2Q9H9L4 492 aa21.89■■□□□ 1.09
SYNGR3-204ENST00000564642 ROBO3Q96MS0 1386 aa21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 SLC3A2P08195 630 aaKnown RBP21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 ATP2B2Q01814 1243 aa21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 MCMDC2Q4G0Z9 681 aa21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 ZNF444Q8N0Y2 327 aaPredicted RBP21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 GPRC5AQ8NFJ5 357 aa21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 SH3TC2Q8TF17 1288 aa21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 RPAP3Q9H6T3 665 aaPredicted RBP21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 MORF4L1Q9UBU8 362 aa21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 GABRQQ9UN88 632 aa21.88■■□□□ 1.09
SYNGR3-204ENST00000564642 RASA1P20936 1047 aa21.87■■□□□ 1.09
SYNGR3-204ENST00000564642 CLEC10AQ8IUN9 316 aa21.87■■□□□ 1.09
SYNGR3-204ENST00000564642 SIAH1Q8IUQ4 282 aa21.87■■□□□ 1.09
SYNGR3-204ENST00000564642 ZNF333Q96JL9 665 aa21.87■■□□□ 1.09
SYNGR3-204ENST00000564642 FAM227BQ96M60 508 aa21.87■■□□□ 1.09
SYNGR3-204ENST00000564642 PAGR1Q9BTK6 254 aa21.87■■□□□ 1.09
SYNGR3-204ENST00000564642 TMEM106CQ9BVX2 250 aa21.87■■□□□ 1.09
SYNGR3-204ENST00000564642 TMX2Q9Y320 296 aa21.87■■□□□ 1.09
SYNGR3-204ENST00000564642 EEF2P13639 858 aaKnown RBP21.86■■□□□ 1.09
SYNGR3-204ENST00000564642 GRK4P32298 578 aa21.86■■□□□ 1.09
SYNGR3-204ENST00000564642 PDE4BQ07343 736 aa21.86■■□□□ 1.09
SYNGR3-204ENST00000564642 CCAR1Q8IX12 1150 aaKnown RBP21.86■■□□□ 1.09
SYNGR3-204ENST00000564642 LPAR1Q92633 364 aa21.86■■□□□ 1.09
SYNGR3-204ENST00000564642 TXNRD2Q9NNW7 524 aa21.86■■□□□ 1.09
SYNGR3-204ENST00000564642 RBPJLQ9UBG7 517 aa21.86■■□□□ 1.09
SYNGR3-204ENST00000564642 DOCK3Q8IZD9 2030 aa21.85■■□□□ 1.09
SYNGR3-204ENST00000564642 A0A0D9SFI3 127 aa21.85■■□□□ 1.09
SYNGR3-204ENST00000564642 SDSP20132 328 aa21.85■■□□□ 1.09
SYNGR3-204ENST00000564642 FLT3LGP49771 235 aa21.85■■□□□ 1.09
SYNGR3-204ENST00000564642 PPARAQ07869 468 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms