RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 KSR1Q8IVT5 923 aa7.76□□□□□ -1.17
CHD9-212ENST00000564641 SLFN12Q8IYM2 578 aa7.76□□□□□ -1.17
CHD9-212ENST00000564641 DNAJB8Q8NHS0 232 aa7.76□□□□□ -1.17
CHD9-212ENST00000564641 KIRREL1Q96J84 757 aa7.76□□□□□ -1.17
CHD9-212ENST00000564641 RHOVQ96L33 236 aa7.76□□□□□ -1.17
CHD9-212ENST00000564641 ALPK1Q96QP1 1244 aa7.76□□□□□ -1.17
CHD9-212ENST00000564641 ZSWIM5Q9P217 1185 aa7.76□□□□□ -1.17
CHD9-212ENST00000564641 KCNH3Q9ULD8 1083 aa7.76□□□□□ -1.17
CHD9-212ENST00000564641 PF4P02776 101 aa7.75□□□□□ -1.17
CHD9-212ENST00000564641 GLI1P08151 1106 aa7.75□□□□□ -1.17
CHD9-212ENST00000564641 GBP2P32456 591 aaPredicted RBP7.75□□□□□ -1.17
CHD9-212ENST00000564641 BNC2Q6ZN30 1099 aaPredicted RBP7.75□□□□□ -1.17
CHD9-212ENST00000564641 FAM13CQ8NE31 585 aa7.75□□□□□ -1.17
CHD9-212ENST00000564641 FAM84AQ96KN4 292 aa7.75□□□□□ -1.17
CHD9-212ENST00000564641 GPATCH2Q9NW75 528 aa7.75□□□□□ -1.17
CHD9-212ENST00000564641 F13A1P00488 732 aa7.74□□□□□ -1.17
CHD9-212ENST00000564641 RAC2P15153 192 aa7.74□□□□□ -1.17
CHD9-212ENST00000564641 TMEM67Q5HYA8 995 aa7.74□□□□□ -1.17
CHD9-212ENST00000564641 ZNF648Q5T619 568 aaPredicted RBP7.74□□□□□ -1.17
CHD9-212ENST00000564641 KRTAP9-9Q9BYP9 154 aa7.74□□□□□ -1.17
CHD9-212ENST00000564641 KRTAP9-4Q9BYQ2 154 aa7.74□□□□□ -1.17
CHD9-212ENST00000564641 ZNF503-AS2A6NEH8 195 aa7.73□□□□□ -1.17
CHD9-212ENST00000564641 JAG1P78504 1218 aa7.73□□□□□ -1.17
CHD9-212ENST00000564641 MLECQ14165 292 aa7.73□□□□□ -1.17
CHD9-212ENST00000564641 MPP2Q14168 576 aa7.73□□□□□ -1.17
CHD9-212ENST00000564641 SNAP47Q5SQN1 464 aa7.73□□□□□ -1.17
CHD9-212ENST00000564641 RNF141Q8WVD5 230 aa7.73□□□□□ -1.17
CHD9-212ENST00000564641 GPR62Q9BZJ7 368 aa7.73□□□□□ -1.17
CHD9-212ENST00000564641 CORINQ9Y5Q5 1042 aa7.73□□□□□ -1.17
CHD9-212ENST00000564641 ROBO2Q9HCK4 1378 aa7.72□□□□□ -1.17
CHD9-212ENST00000564641 ZNF326Q5BKZ1 582 aaKnown RBP7.72□□□□□ -1.17
CHD9-212ENST00000564641 PPP1R13LQ8WUF5 828 aa7.72□□□□□ -1.17
CHD9-212ENST00000564641 Q96M66 194 aa7.72□□□□□ -1.17
CHD9-212ENST00000564641 GZF1Q9H116 711 aaPredicted RBP7.72□□□□□ -1.17
CHD9-212ENST00000564641 C19orf73Q9NVV2 129 aa7.72□□□□□ -1.17
CHD9-212ENST00000564641 DBX1A6NMT0 343 aa7.71□□□□□ -1.18
CHD9-212ENST00000564641 MPZL3Q6UWV2 235 aa7.71□□□□□ -1.18
CHD9-212ENST00000564641 GOLM1Q8NBJ4 401 aa7.71□□□□□ -1.18
CHD9-212ENST00000564641 SYTL4Q96C24 671 aaPredicted RBP7.71□□□□□ -1.18
CHD9-212ENST00000564641 CCDC74BQ96LY2 380 aa7.71□□□□□ -1.18
CHD9-212ENST00000564641 PPP1R16BQ96T49 567 aa7.71□□□□□ -1.18
CHD9-212ENST00000564641 ASPNQ9BXN1 380 aa7.71□□□□□ -1.18
CHD9-212ENST00000564641 DUSP15Q9H1R2 295 aaPredicted RBP7.71□□□□□ -1.18
CHD9-212ENST00000564641 SLAMF8Q9P0V8 285 aa7.71□□□□□ -1.18
CHD9-212ENST00000564641 REV1Q9UBZ9 1251 aa7.71□□□□□ -1.18
CHD9-212ENST00000564641 TMEM59LQ9UK28 342 aa7.71□□□□□ -1.18
CHD9-212ENST00000564641 HTR3BO95264 441 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 ESR1P03372 595 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 SRFP11831 508 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 TPP2P29144 1249 aaPredicted RBP7.7□□□□□ -1.18
CHD9-212ENST00000564641 TNNI2P48788 182 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 MESP2Q0VG99 397 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 MLANAQ16655 118 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 CWF19L2Q2TBE0 894 aaKnown RBP7.7□□□□□ -1.18
CHD9-212ENST00000564641 GAB4Q2WGN9 574 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 FYB2Q5VWT5 728 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 FAM196AQ6ZSG2 479 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 REC114Q7Z4M0 266 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 TTC6Q86TZ1 520 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 DTWD2Q8NBA8 298 aa7.7□□□□□ -1.18
CHD9-212ENST00000564641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.7□□□□□ -1.18
CHD9-212ENST00000564641 UPK3BL1B0FP48 263 aa7.69□□□□□ -1.18
CHD9-212ENST00000564641 UPK3BL2E5RIL1 263 aa7.69□□□□□ -1.18
CHD9-212ENST00000564641 F6X3S4 739 aa7.69□□□□□ -1.18
CHD9-212ENST00000564641 CHMP4BP1P59074 171 aa7.69□□□□□ -1.18
CHD9-212ENST00000564641 ERMP1Q7Z2K6 904 aa7.69□□□□□ -1.18
CHD9-212ENST00000564641 TSPYL5Q86VY4 417 aaPredicted RBP7.69□□□□□ -1.18
CHD9-212ENST00000564641 CREG2Q8IUH2 290 aa7.69□□□□□ -1.18
CHD9-212ENST00000564641 KCNQ5Q9NR82 932 aa7.69□□□□□ -1.18
CHD9-212ENST00000564641 DUSP13Q9UII6 198 aa7.69□□□□□ -1.18
CHD9-212ENST00000564641 MINDY4BA8MYZ0 360 aa7.68□□□□□ -1.18
CHD9-212ENST00000564641 TAGLNQ01995 201 aaKnown RBP7.68□□□□□ -1.18
CHD9-212ENST00000564641 FAM160A1Q05DH4 1040 aa7.68□□□□□ -1.18
CHD9-212ENST00000564641 PHACTR4Q8IZ21 702 aa7.68□□□□□ -1.18
CHD9-212ENST00000564641 ABHD4Q8TB40 342 aa7.68□□□□□ -1.18
CHD9-212ENST00000564641 LIN37Q96GY3 246 aaPredicted RBP7.68□□□□□ -1.18
CHD9-212ENST00000564641 BCL2L13Q9BXK5 485 aa7.68□□□□□ -1.18
CHD9-212ENST00000564641 LRRC3Q9BY71 257 aa7.68□□□□□ -1.18
CHD9-212ENST00000564641 KLHL3Q9UH77 587 aa7.68□□□□□ -1.18
CHD9-212ENST00000564641 SUPT16HQ9Y5B9 1047 aaKnown RBP7.68□□□□□ -1.18
CHD9-212ENST00000564641 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.67□□□□□ -1.18
CHD9-212ENST00000564641 DHX38Q92620 1227 aaKnown RBP7.67□□□□□ -1.18
CHD9-212ENST00000564641 KREMEN1Q96MU8 473 aa7.67□□□□□ -1.18
CHD9-212ENST00000564641 KBTBD4Q9NVX7 518 aa7.67□□□□□ -1.18
CHD9-212ENST00000564641 POLR3KQ9Y2Y1 108 aaPredicted RBP7.67□□□□□ -1.18
CHD9-212ENST00000564641 DNAJC25-GNG10A0A024R161 153 aa7.66□□□□□ -1.18
CHD9-212ENST00000564641 GRIN3BO60391 1043 aa7.66□□□□□ -1.18
CHD9-212ENST00000564641 GARTP22102 1010 aa7.66□□□□□ -1.18
CHD9-212ENST00000564641 EIF4A3P38919 411 aaKnown RBP7.66□□□□□ -1.18
CHD9-212ENST00000564641 ZNF124Q15973 351 aa7.66□□□□□ -1.18
CHD9-212ENST00000564641 HS2ST1Q7LGA3 356 aa7.66□□□□□ -1.18
CHD9-212ENST00000564641 OXR1Q8N573 874 aa7.66□□□□□ -1.18
CHD9-212ENST00000564641 ENOX1Q8TC92 643 aaKnown RBP7.66□□□□□ -1.18
CHD9-212ENST00000564641 MYLIPQ8WY64 445 aa7.66□□□□□ -1.18
CHD9-212ENST00000564641 CHURC1-FNTBB4DL54 471 aa7.65□□□□□ -1.18
CHD9-212ENST00000564641 TSPAN15O95858 294 aa7.65□□□□□ -1.18
CHD9-212ENST00000564641 HPXP02790 462 aa7.65□□□□□ -1.18
CHD9-212ENST00000564641 LTKP29376 864 aa7.65□□□□□ -1.18
CHD9-212ENST00000564641 GBP1P32455 592 aa7.65□□□□□ -1.18
CHD9-212ENST00000564641 RNF4P78317 190 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms