RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 ADORA1P30542 326 aa19.66■□□□□ 0.74
RNF40-205ENST00000563909 C1orf53Q5VUE5 145 aa19.66■□□□□ 0.74
RNF40-205ENST00000563909 TRMT2AQ8IZ69 625 aaKnown RBP19.66■□□□□ 0.74
RNF40-205ENST00000563909 EMILIN3Q9NT22 766 aa19.66■□□□□ 0.74
RNF40-205ENST00000563909 ARIH1Q9Y4X5 557 aaPredicted RBP19.66■□□□□ 0.74
RNF40-205ENST00000563909 IVNS1ABPQ9Y6Y0 642 aa19.66■□□□□ 0.74
RNF40-205ENST00000563909 MAP4K4O95819 1239 aaPredicted RBP19.65■□□□□ 0.74
RNF40-205ENST00000563909 CLTBP09497 229 aa19.65■□□□□ 0.74
RNF40-205ENST00000563909 RAG1P15918 1043 aa19.65■□□□□ 0.74
RNF40-205ENST00000563909 FPGSQ05932 587 aa19.65■□□□□ 0.74
RNF40-205ENST00000563909 SHROOM1Q2M3G4 852 aaPredicted RBP19.65■□□□□ 0.74
RNF40-205ENST00000563909 ERICH6Q7L0X2 663 aa19.65■□□□□ 0.74
RNF40-205ENST00000563909 ZNF384Q8TF68 577 aa19.65■□□□□ 0.74
RNF40-205ENST00000563909 NECAB3Q96P71 396 aaPredicted RBP19.65■□□□□ 0.74
RNF40-205ENST00000563909 PRDM12Q9H4Q4 367 aa19.65■□□□□ 0.74
RNF40-205ENST00000563909 PI4KBQ9UBF8 816 aa19.65■□□□□ 0.74
RNF40-205ENST00000563909 GRB14Q14449 540 aa19.64■□□□□ 0.73
RNF40-205ENST00000563909 USP44Q9H0E7 712 aa19.64■□□□□ 0.73
RNF40-205ENST00000563909 HCN4Q9Y3Q4 1203 aa19.64■□□□□ 0.73
RNF40-205ENST00000563909 KIAA0355O15063 1070 aa19.63■□□□□ 0.73
RNF40-205ENST00000563909 ZBTB22O15209 634 aa19.63■□□□□ 0.73
RNF40-205ENST00000563909 SEPT4O43236 478 aa19.63■□□□□ 0.73
RNF40-205ENST00000563909 GDF11O95390 407 aa19.63■□□□□ 0.73
RNF40-205ENST00000563909 IGHA2P01877 340 aa19.63■□□□□ 0.73
RNF40-205ENST00000563909 LRRC41Q15345 812 aa19.63■□□□□ 0.73
RNF40-205ENST00000563909 USP17L2Q6R6M4 530 aa19.63■□□□□ 0.73
RNF40-205ENST00000563909 TEX11Q8IYF3 940 aa19.63■□□□□ 0.73
RNF40-205ENST00000563909 REV3LO60673 3130 aa19.63■□□□□ 0.73
RNF40-205ENST00000563909 PDS5AQ29RF7 1337 aaKnown RBP19.62■□□□□ 0.73
RNF40-205ENST00000563909 CIAO1O76071 339 aa19.62■□□□□ 0.73
RNF40-205ENST00000563909 LDHCP07864 332 aa19.62■□□□□ 0.73
RNF40-205ENST00000563909 GSTO1P78417 241 aa19.62■□□□□ 0.73
RNF40-205ENST00000563909 DPP9Q86TI2 863 aa19.62■□□□□ 0.73
RNF40-205ENST00000563909 USP17L15C9J2P7 530 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 USP17L13C9JLJ4 530 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 USP17L11C9JVI0 530 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 USP17L18D6R9N7 530 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 USP17L22D6RA61 530 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 USP17L17D6RBQ6 530 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 USP17L19D6RCP7 530 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 USP17L20D6RJB6 530 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 IGFBP4P22692 258 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 PBX2P40425 430 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 USP17L24Q0WX57 530 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 ADGRE1Q14246 886 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 CCDC129Q6ZRS4 1044 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 TRIM34Q9BYJ4 488 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 DHX36Q9H2U1 1008 aaKnown RBP19.61■□□□□ 0.73
RNF40-205ENST00000563909 TMEM39AQ9NV64 488 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 FBXO3Q9UK99 471 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 ZBTB21Q9ULJ3 1066 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 PIEZO1Q92508 2521 aa19.61■□□□□ 0.73
RNF40-205ENST00000563909 PQBP1O60828 265 aaKnown RBP19.6■□□□□ 0.73
RNF40-205ENST00000563909 ZYXQ15942 572 aaKnown RBP19.6■□□□□ 0.73
RNF40-205ENST00000563909 OLFML2BQ68BL8 750 aa19.6■□□□□ 0.73
RNF40-205ENST00000563909 CRACR2BQ8N4Y2 399 aaPredicted RBP19.6■□□□□ 0.73
RNF40-205ENST00000563909 SH3RF3Q8TEJ3 882 aaPredicted RBP19.6■□□□□ 0.73
RNF40-205ENST00000563909 NSUN4Q96CB9 384 aaKnown RBP19.6■□□□□ 0.73
RNF40-205ENST00000563909 LRFN3Q9BTN0 628 aa19.6■□□□□ 0.73
RNF40-205ENST00000563909 PBX4Q9BYU1 374 aa19.6■□□□□ 0.73
RNF40-205ENST00000563909 DNAJC18Q9H819 358 aa19.6■□□□□ 0.73
RNF40-205ENST00000563909 GINM1Q9NU53 330 aa19.6■□□□□ 0.73
RNF40-205ENST00000563909 BTBD7Q9P203 1132 aa19.6■□□□□ 0.73
RNF40-205ENST00000563909 GRXCR1A8MXD5 290 aa19.59■□□□□ 0.73
RNF40-205ENST00000563909 BMP1P13497 986 aa19.59■□□□□ 0.73
RNF40-205ENST00000563909 IL15P40933 162 aaPredicted RBP19.59■□□□□ 0.73
RNF40-205ENST00000563909 TIMM10P62072 90 aa19.59■□□□□ 0.73
RNF40-205ENST00000563909 PRAMEF19Q5SWL8 479 aa19.59■□□□□ 0.73
RNF40-205ENST00000563909 YTHDC1Q96MU7 727 aaKnown RBP19.59■□□□□ 0.73
RNF40-205ENST00000563909 PHF24Q9UPV7 400 aa19.59■□□□□ 0.73
RNF40-205ENST00000563909 CHD7Q9P2D1 2997 aa19.59■□□□□ 0.73
RNF40-205ENST00000563909 FAM47AQ5JRC9 791 aa19.58■□□□□ 0.72
RNF40-205ENST00000563909 CATSPERGQ6ZRH7 1159 aa19.58■□□□□ 0.72
RNF40-205ENST00000563909 TBC1D9Q6ZT07 1266 aa19.58■□□□□ 0.72
RNF40-205ENST00000563909 FOXP4Q8IVH2 680 aaPredicted RBP19.58■□□□□ 0.72
RNF40-205ENST00000563909 FEZ1Q99689 392 aa19.58■□□□□ 0.72
RNF40-205ENST00000563909 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.58■□□□□ 0.727e-20■■■■□ 20.4
RNF40-205ENST00000563909 TSPYL2Q9H2G4 693 aaPredicted RBP19.58■□□□□ 0.72
RNF40-205ENST00000563909 RAI14Q9P0K7 980 aa19.58■□□□□ 0.72
RNF40-205ENST00000563909 CT47B1P0C2W7 299 aaPredicted RBP19.57■□□□□ 0.72
RNF40-205ENST00000563909 ADORA2AP29274 412 aa19.57■□□□□ 0.72
RNF40-205ENST00000563909 MRPL50Q8N5N7 158 aaKnown RBP19.57■□□□□ 0.72
RNF40-205ENST00000563909 EPHX3Q9H6B9 360 aa19.57■□□□□ 0.72
RNF40-205ENST00000563909 CXXC1Q9P0U4 656 aaPredicted RBP19.57■□□□□ 0.72
RNF40-205ENST00000563909 METTL16Q86W50 562 aaKnown RBP19.56■□□□□ 0.72
RNF40-205ENST00000563909 SLC44A5Q8NCS7 719 aa19.56■□□□□ 0.72
RNF40-205ENST00000563909 C12orf42Q96LP6 360 aa19.56■□□□□ 0.72
RNF40-205ENST00000563909 TCF20Q9UGU0 1960 aaKnown RBP19.55■□□□□ 0.72
RNF40-205ENST00000563909 PTPRCP08575 1304 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 STRNO43815 780 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 TFF2Q03403 129 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 FAAP100Q0VG06 881 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 LBX2Q6XYB7 198 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 MAPKAPK5Q8IW41 473 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 XAGE2Q96GT9 111 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 NOL10Q9BSC4 688 aaKnown RBP19.55■□□□□ 0.72
RNF40-205ENST00000563909 XPNPEP3Q9NQH7 507 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 HMG20BQ9P0W2 317 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 PALD1Q9ULE6 856 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 PA2G4Q9UQ80 394 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms