RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 FAM169AQ9Y6X4 670 aa18.64■□□□□ 0.57
TPM1-228ENST00000560975 C5P01031 1676 aa18.63■□□□□ 0.57
TPM1-228ENST00000560975 MNAT1P51948 309 aa18.63■□□□□ 0.57
TPM1-228ENST00000560975 MAP9Q49MG5 647 aa18.63■□□□□ 0.57
TPM1-228ENST00000560975 CDKAL1Q5VV42 579 aa18.63■□□□□ 0.57
TPM1-228ENST00000560975 ZC3H4Q9UPT8 1303 aaKnown RBP18.63■□□□□ 0.57
TPM1-228ENST00000560975 H7C1W4 665 aa18.63■□□□□ 0.57
TPM1-228ENST00000560975 DPYDQ12882 1025 aa18.63■□□□□ 0.57
TPM1-228ENST00000560975 KRT31Q15323 416 aa18.63■□□□□ 0.57
TPM1-228ENST00000560975 KANK3Q6NY19 840 aa18.63■□□□□ 0.57
TPM1-228ENST00000560975 NFAT5O94916 1531 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 GOLGA6CA6NDK9 693 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 EBAG9O00559 213 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 GCP02774 474 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 MMP1P03956 469 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 GOLGA6DP0CG33 693 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 ESCO1Q5FWF5 840 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 OXER1Q8TDS5 423 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 CCDC51Q96ER9 411 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 CABP5Q9NP86 173 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 GOLGA6AQ9NYA3 693 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 OVOS2A0A0G2JMS6 1433 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 IRAK1P51617 712 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 TRAPPC11Q7Z392 1133 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 PLBD2Q8NHP8 589 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 CAGE1Q8TC20 777 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 MYO1AQ9UBC5 1043 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 REXO2Q9Y3B8 237 aaKnown RBP18.62■□□□□ 0.57
TPM1-228ENST00000560975 SLC12A7Q9Y666 1083 aa18.62■□□□□ 0.57
TPM1-228ENST00000560975 AGPSO00116 658 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 SPATA20Q8TB22 786 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 SELENOOQ9BVL4 669 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 LY9Q9HBG7 655 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 SAMM50Q9Y512 469 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 SRPRBQ9Y5M8 271 aaKnown RBP18.61■□□□□ 0.57
TPM1-228ENST00000560975 WDR19Q8NEZ3 1342 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 TTLL7Q6ZT98 887 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 BCAS4Q8TDM0 211 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 IGDCC4Q8TDY8 1250 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 CWC25Q9NXE8 425 aaPredicted RBP18.61■□□□□ 0.57
TPM1-228ENST00000560975 SAR1BQ9Y6B6 198 aa18.61■□□□□ 0.57
TPM1-228ENST00000560975 EPN1Q9Y6I3 576 aaPredicted RBP18.61■□□□□ 0.57
TPM1-228ENST00000560975 FAM205CA6NFA0 338 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 PPP1R3GB7ZBB8 358 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
TPM1-228ENST00000560975 RILPL1Q5EBL4 403 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 PAGE5Q96GU1 130 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 PES1O00541 588 aaKnown RBP18.6■□□□□ 0.57
TPM1-228ENST00000560975 ZNF185O15231 689 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 MRPS25P82663 173 aaKnown RBP18.6■□□□□ 0.57
TPM1-228ENST00000560975 CCDC91Q7Z6B0 441 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 ZKSCAN3Q9BRR0 538 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 BLZF1Q9H2G9 400 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 ZBTB3Q9H5J0 574 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 NDUFA10O95299 355 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 HNRNPH1P31943 449 aaKnown RBP18.6■□□□□ 0.57
TPM1-228ENST00000560975 TEX2Q8IWB9 1127 aa18.6■□□□□ 0.57
TPM1-228ENST00000560975 GOLGA6BA6NDN3 693 aa18.59■□□□□ 0.57
TPM1-228ENST00000560975 FMNL1O95466 1100 aaPredicted RBP18.59■□□□□ 0.57
TPM1-228ENST00000560975 CCDC122Q5T0U0 273 aa18.59■□□□□ 0.57
TPM1-228ENST00000560975 TICAM2Q86XR7 235 aa18.59■□□□□ 0.57
TPM1-228ENST00000560975 FAM107BQ9H098 131 aa18.59■□□□□ 0.57
TPM1-228ENST00000560975 IDH1O75874 414 aaKnown RBP18.59■□□□□ 0.57
TPM1-228ENST00000560975 GNGT1P63211 74 aa18.59■□□□□ 0.57
TPM1-228ENST00000560975 RRP12Q5JTH9 1297 aaKnown RBP18.59■□□□□ 0.57
TPM1-228ENST00000560975 GNL3LQ9NVN8 582 aaKnown RBP18.59■□□□□ 0.57
TPM1-228ENST00000560975 MAPK8IP1Q9UQF2 711 aa18.59■□□□□ 0.57
TPM1-228ENST00000560975 A1BGP04217 495 aa18.58■□□□□ 0.57
TPM1-228ENST00000560975 FECHP22830 423 aa18.58■□□□□ 0.57
TPM1-228ENST00000560975 MCM3P25205 808 aa18.58■□□□□ 0.57
TPM1-228ENST00000560975 COPB1P53618 953 aaKnown RBP18.58■□□□□ 0.57
TPM1-228ENST00000560975 CTDSPL2Q05D32 466 aa18.58■□□□□ 0.57
TPM1-228ENST00000560975 C2orf54Q08AI8 447 aa18.58■□□□□ 0.57
TPM1-228ENST00000560975 RAPGEF4Q8WZA2 1011 aa18.58■□□□□ 0.57
TPM1-228ENST00000560975 CAPS2Q9BXY5 557 aa18.58■□□□□ 0.57
TPM1-228ENST00000560975 MAP3K15Q6ZN16 1313 aa18.58■□□□□ 0.56
TPM1-228ENST00000560975 SHOX2O60902 331 aaPredicted RBP18.58■□□□□ 0.56
TPM1-228ENST00000560975 RRAGBQ5VZM2 374 aa18.58■□□□□ 0.56
TPM1-228ENST00000560975 ZNF579Q8NAF0 562 aaKnown RBP18.58■□□□□ 0.56
TPM1-228ENST00000560975 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.58■□□□□ 0.56
TPM1-228ENST00000560975 TMEM87BQ96K49 555 aa18.58■□□□□ 0.56
TPM1-228ENST00000560975 UBXN1Q04323 297 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 FKBP15Q5T1M5 1219 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 KCNV1Q6PIU1 500 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 TRIM22Q8IYM9 498 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 SYMPKQ92797 1274 aaKnown RBP18.57■□□□□ 0.56
TPM1-228ENST00000560975 JAKMIP2Q96AA8 810 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 STRN4Q9NRL3 753 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 ITIH6Q6UXX5 1313 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
TPM1-228ENST00000560975 INPP5BP32019 993 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 CCDC57Q2TAC2 916 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 SWT1Q5T5J6 900 aaKnown RBP18.57■□□□□ 0.56
TPM1-228ENST00000560975 NBPF14Q5TI25 921 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 CCNI2Q6ZMN8 369 aaPredicted RBP18.57■□□□□ 0.56
TPM1-228ENST00000560975 SND1Q7KZF4 910 aaKnown RBP eCLIP18.57■□□□□ 0.56
TPM1-228ENST00000560975 ZSWIM5Q9P217 1185 aa18.57■□□□□ 0.56
TPM1-228ENST00000560975 SHTN1A0MZ66 631 aa18.56■□□□□ 0.56
TPM1-228ENST00000560975 PDE2AO00408 941 aaPredicted RBP18.56■□□□□ 0.56
TPM1-228ENST00000560975 WASF1Q92558 559 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms