RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 CEP95Q96GE4 821 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 WDR18Q9BV38 432 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 USP26Q9BXU7 913 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 A0A0G2JMZ2 1700 aa12.93□□□□□ -0.34
TPM1-217ENST00000559108 PCNTO95613 3336 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 A0A0G2JLL6 359 aaPredicted RBP12.92□□□□□ -0.34
TPM1-217ENST00000559108 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
TPM1-217ENST00000559108 KDM4AO75164 1064 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 EEF2P13639 858 aaKnown RBP12.92□□□□□ -0.34
TPM1-217ENST00000559108 HSPA4P34932 840 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 NOGQ13253 232 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 MTMR2Q13614 643 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 TREML2Q5T2D2 321 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 CASC1Q6TDU7 716 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 KIAA1211Q6ZU35 1233 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 PRRT2Q7Z6L0 340 aaPredicted RBP12.92□□□□□ -0.34
TPM1-217ENST00000559108 FAM43AQ8N2R8 423 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 ZNF280CQ8ND82 737 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 ZKSCAN3Q9BRR0 538 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 SENP2Q9HC62 589 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
TPM1-217ENST00000559108 EMILIN3Q9NT22 766 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 CTNNA3Q9UI47 895 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
TPM1-217ENST00000559108 COL11A1P12107 1806 aaPredicted RBP12.92□□□□□ -0.34
TPM1-217ENST00000559108 CCL15-CCL14A0A0B4J2E2 113 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 RANBP6O60518 1105 aaKnown RBP12.91□□□□□ -0.34
TPM1-217ENST00000559108 NOVP48745 357 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 HMGCS2P54868 508 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 ICA1Q05084 483 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 PDE4BQ07343 736 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 ZYXQ15942 572 aaKnown RBP12.91□□□□□ -0.34
TPM1-217ENST00000559108 CCL15Q16663 113 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 MB21D2Q8IYB1 491 aaPredicted RBP12.91□□□□□ -0.34
TPM1-217ENST00000559108 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 TOMM22Q9NS69 142 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 ZSWIM5Q9P217 1185 aa12.91□□□□□ -0.34
TPM1-217ENST00000559108 BTBD19C9JJ37 291 aa12.9□□□□□ -0.34
TPM1-217ENST00000559108 SLC3A2P08195 630 aaKnown RBP12.9□□□□□ -0.34
TPM1-217ENST00000559108 CPA1P15085 419 aa12.9□□□□□ -0.34
TPM1-217ENST00000559108 TM4SF4P48230 202 aa12.9□□□□□ -0.34
TPM1-217ENST00000559108 BACE1P56817 501 aa12.9□□□□□ -0.34
TPM1-217ENST00000559108 SH3D19Q5HYK7 790 aa12.9□□□□□ -0.34
TPM1-217ENST00000559108 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
TPM1-217ENST00000559108 ZNF444Q8N0Y2 327 aaPredicted RBP12.9□□□□□ -0.34
TPM1-217ENST00000559108 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
TPM1-217ENST00000559108 GINM1Q9NU53 330 aa12.9□□□□□ -0.34
TPM1-217ENST00000559108 MTMR4Q9NYA4 1195 aa12.9□□□□□ -0.34
TPM1-217ENST00000559108 SNX14Q9Y5W7 946 aa12.9□□□□□ -0.34
TPM1-217ENST00000559108 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
TPM1-217ENST00000559108 TSPY2A6NKD2 308 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 CXCL11O14625 94 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 PEX10O60683 326 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 TSPY3P0CV98 308 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 TSPY8P0CW00 308 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 MAP2K2P36507 400 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 SNAPC2Q13487 334 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 IFNL1Q8IU54 200 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 KIAA1683Q9H0B3 1180 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 CABP5Q9NP86 173 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 TSKSQ9UJT2 592 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 TMX2Q9Y320 296 aa12.89□□□□□ -0.35
TPM1-217ENST00000559108 ADGRA2Q96PE1 1338 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 USP17L10C9JJH3 530 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 REC8O95072 547 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 GTF2A2P52657 109 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 ATP2B2Q01814 1243 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 SEC23AQ15436 765 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 GADL1Q6ZQY3 521 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 ENAHQ8N8S7 591 aaPredicted RBP12.88□□□□□ -0.35
TPM1-217ENST00000559108 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 C12orf42Q96LP6 360 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 TCEANC2Q96MN5 208 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 NUP88Q99567 741 aaPredicted RBP12.88□□□□□ -0.35
TPM1-217ENST00000559108 RNF41Q9H4P4 317 aaPredicted RBP12.88□□□□□ -0.35
TPM1-217ENST00000559108 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 WBP1LQ9NX94 342 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 NYAP2Q9P242 653 aa12.88□□□□□ -0.35
TPM1-217ENST00000559108 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
TPM1-217ENST00000559108 CETPP11597 493 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 VCAM1P19320 739 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 CAP1Q01518 475 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 TSGA10IPQ3SY00 556 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 ESR2Q92731 530 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 MKL1Q969V6 931 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 FEZ1Q99689 392 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 TMEM47Q9BQJ4 181 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 LRRC2Q9BYS8 371 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 RNF186Q9NXI6 227 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 CLIP2Q9UDT6 1046 aa12.87□□□□□ -0.35
TPM1-217ENST00000559108 MGAMO43451 1857 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms