RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 RAD50Q92878 1312 aa16.11■□□□□ 0.17
TMED3-205ENST00000558562 LOC285556D6RIA3 1793 aa16.1■□□□□ 0.17
TMED3-205ENST00000558562 EPB41L2O43491 1005 aaKnown RBP16.1■□□□□ 0.17
TMED3-205ENST00000558562 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
TMED3-205ENST00000558562 MDM2Q00987 491 aaPredicted RBP16.1■□□□□ 0.17
TMED3-205ENST00000558562 RRP1BQ14684 758 aaKnown RBP16.1■□□□□ 0.17
TMED3-205ENST00000558562 EDC3Q96F86 508 aaKnown RBP16.1■□□□□ 0.17
TMED3-205ENST00000558562 KIF2CQ99661 725 aa16.1■□□□□ 0.17
TMED3-205ENST00000558562 MROH7-TTC4A0A0A0MT08 1334 aa16.1■□□□□ 0.17
TMED3-205ENST00000558562 TBC1D12O60347 775 aa16.09■□□□□ 0.17
TMED3-205ENST00000558562 SLC4A3P48751 1232 aa16.09■□□□□ 0.17
TMED3-205ENST00000558562 RHBDL3P58872 404 aa16.09■□□□□ 0.17
TMED3-205ENST00000558562 NMIQ13287 307 aaPredicted RBP16.09■□□□□ 0.17
TMED3-205ENST00000558562 PABPC4Q13310 644 aaKnown RBP eCLIP16.09■□□□□ 0.174e-7■■□□□ 14.2
TMED3-205ENST00000558562 KIAA1211Q6ZU35 1233 aa16.09■□□□□ 0.17
TMED3-205ENST00000558562 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.09■□□□□ 0.17
TMED3-205ENST00000558562 SLF2Q8IX21 1173 aa16.09■□□□□ 0.17
TMED3-205ENST00000558562 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
TMED3-205ENST00000558562 IL25Q9H293 177 aa16.09■□□□□ 0.17
TMED3-205ENST00000558562 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
TMED3-205ENST00000558562 ATAD5Q96QE3 1844 aa16.08■□□□□ 0.17
TMED3-205ENST00000558562 MECOMQ03112 1051 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 RABEP1Q15276 862 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 LRRC26Q2I0M4 334 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 MAP3K21Q5TCX8 1036 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 HSCBQ8IWL3 235 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 ZNF384Q8TF68 577 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 FAM161BQ96MY7 647 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 OSBPL5Q9H0X9 879 aaPredicted RBP16.08■□□□□ 0.16
TMED3-205ENST00000558562 NDUFB9Q9Y6M9 179 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 DNAH12Q6ZR08 3092 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 EYSQ5T1H1 3165 aa16.08■□□□□ 0.16
TMED3-205ENST00000558562 GPR75-ASB3A0A0A6YYF3 556 aa16.07■□□□□ 0.16
TMED3-205ENST00000558562 GOLIM4O00461 696 aa16.07■□□□□ 0.16
TMED3-205ENST00000558562 CAP2P40123 477 aa16.07■□□□□ 0.16
TMED3-205ENST00000558562 SPTY2D1Q68D10 685 aaPredicted RBP16.07■□□□□ 0.16
TMED3-205ENST00000558562 KBTBD3Q8NAB2 608 aa16.07■□□□□ 0.16
TMED3-205ENST00000558562 P2RX7Q99572 595 aaKnown RBP16.07■□□□□ 0.16
TMED3-205ENST00000558562 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
TMED3-205ENST00000558562 TXNRD2Q9NNW7 524 aa16.07■□□□□ 0.16
TMED3-205ENST00000558562 MORF4L1Q9UBU8 362 aa16.07■□□□□ 0.16
TMED3-205ENST00000558562 A0A0D9SFI3 127 aa16.06■□□□□ 0.16
TMED3-205ENST00000558562 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
TMED3-205ENST00000558562 COL6A1P12109 1028 aa16.06■□□□□ 0.16
TMED3-205ENST00000558562 CCND3P30281 292 aaPredicted RBP16.06■□□□□ 0.16
TMED3-205ENST00000558562 IRX3P78415 501 aaPredicted RBP16.06■□□□□ 0.16
TMED3-205ENST00000558562 CACNB2Q08289 660 aaPredicted RBP16.06■□□□□ 0.16
TMED3-205ENST00000558562 MTMR2Q13614 643 aa16.06■□□□□ 0.16
TMED3-205ENST00000558562 TICAM2Q86XR7 235 aa16.06■□□□□ 0.16
TMED3-205ENST00000558562 SNX21Q969T3 373 aa16.06■□□□□ 0.16
TMED3-205ENST00000558562 FAM227BQ96M60 508 aa16.06■□□□□ 0.16
TMED3-205ENST00000558562 GUCD1Q96NT3 240 aa16.06■□□□□ 0.16
TMED3-205ENST00000558562 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
TMED3-205ENST00000558562 MYO5AQ9Y4I1 1855 aaKnown RBP16.05■□□□□ 0.16
TMED3-205ENST00000558562 UQCRFS1P1P0C7P4 283 aa16.05■□□□□ 0.16
TMED3-205ENST00000558562 ZKSCAN1P17029 563 aaPredicted RBP16.05■□□□□ 0.16
TMED3-205ENST00000558562 CCL14Q16627 93 aa16.05■□□□□ 0.16
TMED3-205ENST00000558562 SH3D19Q5HYK7 790 aa16.05■□□□□ 0.16
TMED3-205ENST00000558562 LHX8Q68G74 356 aa16.05■□□□□ 0.16
TMED3-205ENST00000558562 GPRC5AQ8NFJ5 357 aa16.05■□□□□ 0.16
TMED3-205ENST00000558562 ZNF512BQ96KM6 892 aaPredicted RBP16.05■□□□□ 0.16
TMED3-205ENST00000558562 CCDC171Q6TFL3 1326 aa16.04■□□□□ 0.16
TMED3-205ENST00000558562 POTEB2H3BUK9 544 aa16.04■□□□□ 0.16
TMED3-205ENST00000558562 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
TMED3-205ENST00000558562 XRCC5P13010 732 aaKnown RBP16.04■□□□□ 0.16
TMED3-205ENST00000558562 ANAPC15P60006 121 aa16.04■□□□□ 0.16
TMED3-205ENST00000558562 JAG1P78504 1218 aa16.04■□□□□ 0.16
TMED3-205ENST00000558562 PI16Q6UXB8 463 aa16.04■□□□□ 0.16
TMED3-205ENST00000558562 SOCS4Q8WXH5 440 aa16.04■□□□□ 0.16
TMED3-205ENST00000558562 AS3MTQ9HBK9 375 aa16.04■□□□□ 0.16
TMED3-205ENST00000558562 SNRKQ9NRH2 765 aa16.04■□□□□ 0.16
TMED3-205ENST00000558562 PDS5AQ29RF7 1337 aaKnown RBP16.03■□□□□ 0.16
TMED3-205ENST00000558562 ARID4AP29374 1257 aaPredicted RBP16.03■□□□□ 0.16
TMED3-205ENST00000558562 HERVK_113P62684 666 aa16.03■□□□□ 0.16
TMED3-205ENST00000558562 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
TMED3-205ENST00000558562 LRRFIP1Q32MZ4 808 aaKnown RBP16.03■□□□□ 0.16
TMED3-205ENST00000558562 Q3C1V9 767 aa16.03■□□□□ 0.16
TMED3-205ENST00000558562 PORCNQ9H237 461 aa16.03■□□□□ 0.16
TMED3-205ENST00000558562 TMOD4Q9NZQ9 345 aa16.03■□□□□ 0.16
TMED3-205ENST00000558562 RBPJLQ9UBG7 517 aa16.03■□□□□ 0.16
TMED3-205ENST00000558562 SPTBN5Q9NRC6 3674 aaKnown RBP16.03■□□□□ 0.16
TMED3-205ENST00000558562 ZBTB22O15209 634 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 HSPA4P34932 840 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 MCAMP43121 646 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 ZAP70P43403 619 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 BACE1P56817 501 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.16
TMED3-205ENST00000558562 TEX11Q8IYF3 940 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 SH3RF3Q8TEJ3 882 aaPredicted RBP16.02■□□□□ 0.16
TMED3-205ENST00000558562 USP6NLQ92738 828 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 NSUN4Q96CB9 384 aaKnown RBP16.02■□□□□ 0.16
TMED3-205ENST00000558562 PAGR1Q9BTK6 254 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 WDR18Q9BV38 432 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 RAI14Q9P0K7 980 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 HMG20BQ9P0W2 317 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 PALD1Q9ULE6 856 aa16.02■□□□□ 0.16
TMED3-205ENST00000558562 MAPK4P31152 587 aa16.01■□□□□ 0.15
TMED3-205ENST00000558562 HOXA7P31268 230 aaPredicted RBP16.01■□□□□ 0.15
TMED3-205ENST00000558562 GSTO1P78417 241 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms