RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 CNGA4Q8IV77 575 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 MAPKAPK5Q8IW41 473 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 UBA5Q9GZZ9 404 aa17.48■□□□□ 0.39
AP4E1-202ENST00000558439 WWC2Q6AWC2 1192 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 MMRN2Q9H8L6 949 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 AKR1B10O60218 316 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 GOLGA8HP0CJ92 632 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 TRIM28Q13263 835 aaKnown RBP17.47■□□□□ 0.39
AP4E1-202ENST00000558439 TMEM266Q2M3C6 531 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 CRACR2AQ9BSW2 395 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 PSDA5PKW4 1024 aaPredicted RBP17.47■□□□□ 0.39
AP4E1-202ENST00000558439 GSG1L2A8MUP6 293 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 PLEKHA8P1O95397 391 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 FOXP1Q9H334 677 aaPredicted RBP17.47■□□□□ 0.39
AP4E1-202ENST00000558439 TCHHQ07283 1943 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 COL15A1P39059 1388 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 PAK1Q13153 545 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 ARMCX5Q6P1M9 558 aa17.47■□□□□ 0.39
AP4E1-202ENST00000558439 RTCBQ9Y3I0 505 aaKnown RBP17.47■□□□□ 0.39
AP4E1-202ENST00000558439 ERFEQ4G0M1 354 aa17.46■□□□□ 0.39
AP4E1-202ENST00000558439 TGFBRAP1Q8WUH2 860 aa17.46■□□□□ 0.39
AP4E1-202ENST00000558439 FERMT2Q96AC1 680 aa17.46■□□□□ 0.39
AP4E1-202ENST00000558439 IL17RAQ96F46 866 aa17.46■□□□□ 0.39
AP4E1-202ENST00000558439 CWC15Q9P013 229 aaKnown RBP17.46■□□□□ 0.39
AP4E1-202ENST00000558439 AMPD3Q01432 767 aa17.46■□□□□ 0.39
AP4E1-202ENST00000558439 KLHL34Q8N239 644 aa17.46■□□□□ 0.39
AP4E1-202ENST00000558439 NELFBQ8WX92 580 aa17.46■□□□□ 0.39
AP4E1-202ENST00000558439 CENPHQ9H3R5 247 aa17.46■□□□□ 0.39
AP4E1-202ENST00000558439 FAM182BQ5T319 152 aa17.46■□□□□ 0.38
AP4E1-202ENST00000558439 FBXO38Q6PIJ6 1188 aa17.46■□□□□ 0.38
AP4E1-202ENST00000558439 TNNI2P48788 182 aa17.45■□□□□ 0.38
AP4E1-202ENST00000558439 RESP18Q5W5W9 173 aa17.45■□□□□ 0.38
AP4E1-202ENST00000558439 ZNF710Q8N1W2 664 aa17.45■□□□□ 0.38
AP4E1-202ENST00000558439 GBP3Q9H0R5 595 aa17.45■□□□□ 0.38
AP4E1-202ENST00000558439 PRR29P0C7W0 189 aa17.45■□□□□ 0.38
AP4E1-202ENST00000558439 CCDC40Q4G0X9 1142 aa17.45■□□□□ 0.38
AP4E1-202ENST00000558439 MYO1BO43795 1136 aa17.45■□□□□ 0.38
AP4E1-202ENST00000558439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.45■□□□□ 0.38
AP4E1-202ENST00000558439 RAB34Q9BZG1 259 aa17.45■□□□□ 0.38
AP4E1-202ENST00000558439 RIMBP2O15034 1052 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 CSF1RP07333 972 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 CHMP4BP1P59074 171 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 TBC1D8BQ0IIM8 1120 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 VSTM4Q8IW00 320 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 ARID4AP29374 1257 aaPredicted RBP17.44■□□□□ 0.38
AP4E1-202ENST00000558439 CCZ1BP86790 482 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 CCZ1P86791 482 aaPredicted RBP17.44■□□□□ 0.38
AP4E1-202ENST00000558439 INF2Q27J81 1249 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 USP49Q70CQ1 688 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 TRMT1LQ7Z2T5 733 aaKnown RBP17.44■□□□□ 0.38
AP4E1-202ENST00000558439 IGDCC4Q8TDY8 1250 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 NYXQ9GZU5 481 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 ANKRD2Q9GZV1 360 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 FAM205CA6NFA0 338 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 NMT2O60551 498 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 USO1O60763 962 aaKnown RBP17.44■□□□□ 0.38
AP4E1-202ENST00000558439 TXKP42681 527 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 PLCD1P51178 756 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 ARID5AQ03989 594 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 PDE4DQ08499 809 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 CCDC122Q5T0U0 273 aa17.44■□□□□ 0.38
AP4E1-202ENST00000558439 RNF26Q9BY78 433 aaPredicted RBP17.44■□□□□ 0.38
AP4E1-202ENST00000558439 MACROD2A1Z1Q3 448 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 ERVV-1B6SEH8 477 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 CCNT1O60563 726 aaKnown RBP17.43■□□□□ 0.38
AP4E1-202ENST00000558439 SEC31AO94979 1220 aaKnown RBP17.43■□□□□ 0.38
AP4E1-202ENST00000558439 CASP14P31944 242 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 ZNF76P36508 570 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 C6orf50Q9HD87 102 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 SCG2P13521 617 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 GSTO1P78417 241 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 PNMA1Q8ND90 353 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 CCDC43Q96MW1 224 aaKnown RBP17.43■□□□□ 0.38
AP4E1-202ENST00000558439 MROH7-TTC4A0A0A0MT08 1334 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 PTPREP23469 700 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 SPATA1Q5VX52 437 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 METTL16Q86W50 562 aaKnown RBP17.43■□□□□ 0.38
AP4E1-202ENST00000558439 TEX11Q8IYF3 940 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 CSGALNACT2Q8N6G5 542 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 CEP112Q8N8E3 955 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 CEP89Q96ST8 783 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 NRXN3Q9Y4C0 1643 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 TSG101Q99816 390 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 EPC1Q9H2F5 836 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 TCEAL9Q9UHQ7 104 aa17.43■□□□□ 0.38
AP4E1-202ENST00000558439 CYLC1P35663 651 aaPredicted RBP17.42■□□□□ 0.38
AP4E1-202ENST00000558439 GRIN1Q05586 938 aa17.42■□□□□ 0.38
AP4E1-202ENST00000558439 E4F1Q66K89 784 aaPredicted RBP17.42■□□□□ 0.38
AP4E1-202ENST00000558439 CCDC42Q96M95 316 aa17.42■□□□□ 0.38
AP4E1-202ENST00000558439 OSBPL5Q9H0X9 879 aaPredicted RBP17.42■□□□□ 0.38
AP4E1-202ENST00000558439 SOWAHDA6NJG2 315 aa17.42■□□□□ 0.38
AP4E1-202ENST00000558439 RRP36Q96EU6 259 aaKnown RBP17.42■□□□□ 0.38
AP4E1-202ENST00000558439 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
AP4E1-202ENST00000558439 UBR1Q8IWV7 1749 aa17.42■□□□□ 0.38
AP4E1-202ENST00000558439 RBM43Q6ZSC3 357 aaKnown RBP17.42■□□□□ 0.38
AP4E1-202ENST00000558439 EPB41L4AQ9HCS5 686 aaPredicted RBP17.42■□□□□ 0.38
AP4E1-202ENST00000558439 SRPRBQ9Y5M8 271 aaKnown RBP17.42■□□□□ 0.38
AP4E1-202ENST00000558439 ARHGAP23Q9P227 1491 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms