RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ZNF280CQ8ND82 737 aa25.09■■□□□ 1.61
CASC4-204ENST00000557945 ZSWIM5Q9P217 1185 aa25.09■■□□□ 1.61
CASC4-204ENST00000557945 TRIM75PA6NK02 468 aa25.08■■□□□ 1.61
CASC4-204ENST00000557945 IRF6O14896 467 aa25.08■■□□□ 1.61
CASC4-204ENST00000557945 ZBTB48P10074 688 aaPredicted RBP25.08■■□□□ 1.61
CASC4-204ENST00000557945 CEP95Q96GE4 821 aa25.08■■□□□ 1.61
CASC4-204ENST00000557945 BACH2Q9BYV9 841 aa25.08■■□□□ 1.61
CASC4-204ENST00000557945 TBC1D2Q9BYX2 928 aa25.08■■□□□ 1.61
CASC4-204ENST00000557945 UPF2Q9HAU5 1272 aaKnown RBP25.08■■□□□ 1.61
CASC4-204ENST00000557945 AFG3L2Q9Y4W6 797 aa25.08■■□□□ 1.61
CASC4-204ENST00000557945 PLIN4Q96Q06 1357 aa25.08■■□□□ 1.61
CASC4-204ENST00000557945 FAM155AB1AL88 458 aaPredicted RBP25.07■■□□□ 1.6
CASC4-204ENST00000557945 NMT2O60551 498 aa25.07■■□□□ 1.6
CASC4-204ENST00000557945 IQCA1Q86XH1 822 aa25.07■■□□□ 1.6
CASC4-204ENST00000557945 FEZ1Q99689 392 aa25.07■■□□□ 1.6
CASC4-204ENST00000557945 ZKSCAN3Q9BRR0 538 aa25.07■■□□□ 1.6
CASC4-204ENST00000557945 WDR18Q9BV38 432 aa25.07■■□□□ 1.6
CASC4-204ENST00000557945 ARHGEF10LQ9HCE6 1279 aa25.07■■□□□ 1.6
CASC4-204ENST00000557945 IGKV6D-41A0A0C4DH26 115 aa25.06■■□□□ 1.6
CASC4-204ENST00000557945 EEF2P13639 858 aaKnown RBP25.06■■□□□ 1.6
CASC4-204ENST00000557945 ADCK5Q3MIX3 580 aa25.06■■□□□ 1.6
CASC4-204ENST00000557945 CYB5R4Q7L1T6 521 aa25.06■■□□□ 1.6
CASC4-204ENST00000557945 ACER1Q8TDN7 264 aa25.06■■□□□ 1.6
CASC4-204ENST00000557945 JAKMIP1Q96N16 626 aaKnown RBP25.06■■□□□ 1.6
CASC4-204ENST00000557945 NEK1Q96PY6 1258 aa25.06■■□□□ 1.6
CASC4-204ENST00000557945 IL17RBQ9NRM6 502 aa25.06■■□□□ 1.6
CASC4-204ENST00000557945 MTMR4Q9NYA4 1195 aa25.06■■□□□ 1.6
CASC4-204ENST00000557945 CHST3Q7LGC8 479 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 UBAC1Q9BSL1 405 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 CLIP2Q9UDT6 1046 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 STX8Q9UNK0 236 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 WDR33Q9C0J8 1336 aaKnown RBP25.05■■□□□ 1.6
CASC4-204ENST00000557945 USP17L10C9JJH3 530 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 CXCL11O14625 94 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 TTLL1O95922 423 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 VEGFBP49765 207 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 SNAPC2Q13487 334 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 MTMR2Q13614 643 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 ZYXQ15942 572 aaKnown RBP25.05■■□□□ 1.6
CASC4-204ENST00000557945 PPP4R3BQ5MIZ7 849 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 SIAH1Q8IUQ4 282 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 MB21D2Q8IYB1 491 aaPredicted RBP25.05■■□□□ 1.6
CASC4-204ENST00000557945 TCP11L1Q9NUJ3 509 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 KCNH4Q9UQ05 1017 aa25.05■■□□□ 1.6
CASC4-204ENST00000557945 A0A1W2PRG0 241 aa25.04■■□□□ 1.6
CASC4-204ENST00000557945 AOC2O75106 756 aa25.04■■□□□ 1.6
CASC4-204ENST00000557945 MCM5P33992 734 aa25.04■■□□□ 1.6
CASC4-204ENST00000557945 GTF2A2P52657 109 aa25.04■■□□□ 1.6
CASC4-204ENST00000557945 NOGQ13253 232 aa25.04■■□□□ 1.6
CASC4-204ENST00000557945 ZSCAN10Q96SZ4 725 aaPredicted RBP25.04■■□□□ 1.6
CASC4-204ENST00000557945 SH2D4AQ9H788 454 aa25.04■■□□□ 1.6
CASC4-204ENST00000557945 NYAP2Q9P242 653 aa25.04■■□□□ 1.6
CASC4-204ENST00000557945 GREB1LQ9C091 1923 aaPredicted RBP25.03■■□□□ 1.6
CASC4-204ENST00000557945 PRC1O43663 620 aa25.03■■□□□ 1.6
CASC4-204ENST00000557945 PSMA5P28066 241 aa25.03■■□□□ 1.6
CASC4-204ENST00000557945 BACE1P56817 501 aa25.03■■□□□ 1.6
CASC4-204ENST00000557945 CCDC178Q5BJE1 867 aa25.03■■□□□ 1.6
CASC4-204ENST00000557945 C22orf23Q9BZE7 217 aa25.03■■□□□ 1.6
CASC4-204ENST00000557945 TNKSO95271 1327 aa25.02■■□□□ 1.6
CASC4-204ENST00000557945 PHIPQ8WWQ0 1821 aa25.02■■□□□ 1.6
CASC4-204ENST00000557945 IFIT3O14879 490 aaKnown RBP25.02■■□□□ 1.6
CASC4-204ENST00000557945 RAD21O60216 631 aa25.02■■□□□ 1.6
CASC4-204ENST00000557945 HMGB1P09429 215 aaKnown RBP25.02■■□□□ 1.6
CASC4-204ENST00000557945 HMGCS2P54868 508 aa25.02■■□□□ 1.6
CASC4-204ENST00000557945 KIF23Q02241 960 aaPredicted RBP25.02■■□□□ 1.6
CASC4-204ENST00000557945 COL9A3Q14050 684 aaPredicted RBP25.02■■□□□ 1.6
CASC4-204ENST00000557945 BLOC1S2Q6QNY1 142 aa25.02■■□□□ 1.6
CASC4-204ENST00000557945 LRRC47Q8N1G4 583 aaKnown RBP25.02■■□□□ 1.6
CASC4-204ENST00000557945 CCL15-CCL14A0A0B4J2E2 113 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 ERICH2A1L162 156 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 MANSC4A6NHS7 340 aaPredicted RBP25.01■■□□□ 1.59
CASC4-204ENST00000557945 C19orf81C9J6K1 198 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 CETPP11597 493 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 CASTP20810 708 aaKnown RBP25.01■■□□□ 1.59
CASC4-204ENST00000557945 ANTXR2P58335 489 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 ANAPC15P60006 121 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 SART3Q15020 963 aaKnown RBP25.01■■□□□ 1.59
CASC4-204ENST00000557945 CCL15Q16663 113 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 GADL1Q6ZQY3 521 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 MS4A4AQ96JQ5 239 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 ZIC5Q96T25 663 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 KIAA1683Q9H0B3 1180 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 TMOD4Q9NZQ9 345 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 TMX2Q9Y320 296 aa25.01■■□□□ 1.59
CASC4-204ENST00000557945 A0A0G2JLL6 359 aaPredicted RBP25■■□□□ 1.59
CASC4-204ENST00000557945 CPA1P15085 419 aa25■■□□□ 1.59
CASC4-204ENST00000557945 USP14P54578 494 aa25■■□□□ 1.59
CASC4-204ENST00000557945 DGKZQ13574 1117 aa25■■□□□ 1.59
CASC4-204ENST00000557945 TMEM67Q5HYA8 995 aa25■■□□□ 1.59
CASC4-204ENST00000557945 USP17L2Q6R6M4 530 aa25■■□□□ 1.59
CASC4-204ENST00000557945 DHX32Q7L7V1 743 aaKnown RBP25■■□□□ 1.59
CASC4-204ENST00000557945 PRRT2Q7Z6L0 340 aaPredicted RBP25■■□□□ 1.59
CASC4-204ENST00000557945 ENAHQ8N8S7 591 aaPredicted RBP25■■□□□ 1.59
CASC4-204ENST00000557945 TTC14Q96N46 770 aa25■■□□□ 1.59
CASC4-204ENST00000557945 DGKHQ86XP1 1220 aa24.99■■□□□ 1.59
CASC4-204ENST00000557945 MKL1Q969V6 931 aa24.99■■□□□ 1.59
CASC4-204ENST00000557945 TCEANC2Q96MN5 208 aa24.99■■□□□ 1.59
CASC4-204ENST00000557945 LRRC2Q9BYS8 371 aa24.99■■□□□ 1.59
CASC4-204ENST00000557945 TOP1P11387 765 aaKnown RBP24.98■■□□□ 1.59
CASC4-204ENST00000557945 NOVP48745 357 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms