RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 KIAA1683Q9H0B3 1180 aa20.08■□□□□ 0.81
NEDD4-212ENST00000557845 RBBP6Q7Z6E9 1792 aaKnown RBP20.08■□□□□ 0.8
NEDD4-212ENST00000557845 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
NEDD4-212ENST00000557845 SMIM22K7EJ46 135 aa20.07■□□□□ 0.8
NEDD4-212ENST00000557845 MPHOSPH10O00566 681 aaKnown RBP20.07■□□□□ 0.8
NEDD4-212ENST00000557845 TNPO2O14787 897 aaKnown RBP20.07■□□□□ 0.8
NEDD4-212ENST00000557845 USP14P54578 494 aa20.07■□□□□ 0.8
NEDD4-212ENST00000557845 LRRFIP1Q32MZ4 808 aaKnown RBP20.07■□□□□ 0.8
NEDD4-212ENST00000557845 GRK4P32298 578 aa20.06■□□□□ 0.8
NEDD4-212ENST00000557845 CDK8P49336 464 aa20.06■□□□□ 0.8
NEDD4-212ENST00000557845 HERVK_113P62684 666 aa20.06■□□□□ 0.8
NEDD4-212ENST00000557845 DOCK3Q8IZD9 2030 aa20.06■□□□□ 0.8
NEDD4-212ENST00000557845 MORF4L1Q9UBU8 362 aa20.06■□□□□ 0.8
NEDD4-212ENST00000557845 TNRC18O15417 2968 aaPredicted RBP20.05■□□□□ 0.8
NEDD4-212ENST00000557845 GSG1L2A8MUP6 293 aa20.05■□□□□ 0.8
NEDD4-212ENST00000557845 MYCP01106 439 aaPredicted RBP20.05■□□□□ 0.8
NEDD4-212ENST00000557845 EN2P19622 333 aaPredicted RBP20.05■□□□□ 0.8
NEDD4-212ENST00000557845 FLT3LGP49771 235 aa20.05■□□□□ 0.8
NEDD4-212ENST00000557845 GIMAP6Q6P9H5 292 aa20.05■□□□□ 0.8
NEDD4-212ENST00000557845 TMEM179Q6ZVK1 233 aa20.05■□□□□ 0.8
NEDD4-212ENST00000557845 C16orf86Q6ZW13 317 aa20.05■□□□□ 0.8
NEDD4-212ENST00000557845 EXOC6Q8TAG9 804 aa20.05■□□□□ 0.8
NEDD4-212ENST00000557845 COA7Q96BR5 231 aa20.05■□□□□ 0.8
NEDD4-212ENST00000557845 RWDD1Q9H446 243 aaPredicted RBP20.05■□□□□ 0.8
NEDD4-212ENST00000557845 A0A1W2PRG0 241 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 USP17L15C9J2P7 530 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 USP17L13C9JLJ4 530 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 USP17L11C9JVI0 530 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 USP17L18D6R9N7 530 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 USP17L22D6RA61 530 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 USP17L17D6RBQ6 530 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 USP17L19D6RCP7 530 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 USP17L20D6RJB6 530 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 AKR1B1P15121 316 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 USP17L24Q0WX57 530 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 SBK1Q52WX2 424 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 CATSPERGQ6ZRH7 1159 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 CCDC17Q96LX7 622 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 FSD1Q9BTV5 496 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 RBPJLQ9UBG7 517 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 ARPP21Q9UBL0 812 aaPredicted RBP20.04■□□□□ 0.8
NEDD4-212ENST00000557845 STAP2Q9UGK3 403 aa20.04■□□□□ 0.8
NEDD4-212ENST00000557845 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
NEDD4-212ENST00000557845 M0R2C6 588 aa20.03■□□□□ 0.8
NEDD4-212ENST00000557845 GPAA1O43292 621 aa20.03■□□□□ 0.8
NEDD4-212ENST00000557845 PEX10O60683 326 aa20.03■□□□□ 0.8
NEDD4-212ENST00000557845 GNAT2P19087 354 aa20.03■□□□□ 0.8
NEDD4-212ENST00000557845 IRF5Q13568 498 aa20.03■□□□□ 0.8
NEDD4-212ENST00000557845 GPRC5AQ8NFJ5 357 aa20.03■□□□□ 0.8
NEDD4-212ENST00000557845 GTF3C2Q8WUA4 911 aaPredicted RBP20.03■□□□□ 0.8
NEDD4-212ENST00000557845 TXNRD2Q9NNW7 524 aa20.03■□□□□ 0.8
NEDD4-212ENST00000557845 PATL2C9JE40 543 aaKnown RBP20.02■□□□□ 0.8
NEDD4-212ENST00000557845 ADCY3O60266 1144 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 VCAM1P19320 739 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 PDE1AP54750 535 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 MTFR1Q15390 333 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 Q3C1V9 767 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 POTEEQ6S8J3 1075 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 SIAH1Q8IUQ4 282 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 SMC5Q8IY18 1101 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 SLAIN1Q8ND83 568 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 PXYLP1Q8TE99 480 aa20.02■□□□□ 0.8
NEDD4-212ENST00000557845 SEC62Q99442 399 aaKnown RBP20.02■□□□□ 0.8
NEDD4-212ENST00000557845 BIN2Q9UBW5 565 aaPredicted RBP20.02■□□□□ 0.8
NEDD4-212ENST00000557845 IGHDP01880 384 aa20.01■□□□□ 0.79
NEDD4-212ENST00000557845 APPP05067 770 aa20.01■□□□□ 0.79
NEDD4-212ENST00000557845 ZMYM1Q5SVZ6 1142 aa20.01■□□□□ 0.79
NEDD4-212ENST00000557845 GJD2Q9UKL4 321 aa20.01■□□□□ 0.79
NEDD4-212ENST00000557845 MINDY4BA8MYZ0 360 aa20■□□□□ 0.79
NEDD4-212ENST00000557845 ERVK-9P63128 1117 aa20■□□□□ 0.79
NEDD4-212ENST00000557845 ERVK-24P63145 666 aa20■□□□□ 0.79
NEDD4-212ENST00000557845 UBXN2AP68543 259 aa20■□□□□ 0.79
NEDD4-212ENST00000557845 B4GALNT3Q6L9W6 998 aa20■□□□□ 0.79
NEDD4-212ENST00000557845 EVI5LQ96CN4 794 aa20■□□□□ 0.79
NEDD4-212ENST00000557845 LNPKQ9C0E8 428 aa20■□□□□ 0.79
NEDD4-212ENST00000557845 RPAP3Q9H6T3 665 aaPredicted RBP20■□□□□ 0.79
NEDD4-212ENST00000557845 ARHGEF10LQ9HCE6 1279 aa20■□□□□ 0.79
NEDD4-212ENST00000557845 ELNP15502 786 aa19.99■□□□□ 0.79
NEDD4-212ENST00000557845 IFNL3Q8IZI9 196 aa19.99■□□□□ 0.79
NEDD4-212ENST00000557845 PAGR1Q9BTK6 254 aa19.99■□□□□ 0.79
NEDD4-212ENST00000557845 EPB41L4AQ9HCS5 686 aaPredicted RBP19.99■□□□□ 0.79
NEDD4-212ENST00000557845 TMX2Q9Y320 296 aa19.99■□□□□ 0.79
NEDD4-212ENST00000557845 RABGAP1Q9Y3P9 1069 aa19.99■□□□□ 0.79
NEDD4-212ENST00000557845 KIAA0100Q14667 2235 aaKnown RBP19.99■□□□□ 0.79
NEDD4-212ENST00000557845 CCL5P13501 91 aa19.98■□□□□ 0.79
NEDD4-212ENST00000557845 TDO2P48775 406 aa19.98■□□□□ 0.79
NEDD4-212ENST00000557845 ICA1Q05084 483 aa19.98■□□□□ 0.79
NEDD4-212ENST00000557845 KIAA1755Q5JYT7 1200 aa19.98■□□□□ 0.79
NEDD4-212ENST00000557845 CLEC10AQ8IUN9 316 aa19.98■□□□□ 0.79
NEDD4-212ENST00000557845 STK11IPQ8N1F8 1099 aa19.98■□□□□ 0.79
NEDD4-212ENST00000557845 KANSL2Q9H9L4 492 aa19.98■□□□□ 0.79
NEDD4-212ENST00000557845 MKNK2Q9HBH9 465 aa19.98■□□□□ 0.79
NEDD4-212ENST00000557845 BRCA2P51587 3418 aa19.98■□□□□ 0.79
NEDD4-212ENST00000557845 PLXNB2O15031 1838 aa19.97■□□□□ 0.79
NEDD4-212ENST00000557845 CNMDO75829 334 aa19.97■□□□□ 0.79
NEDD4-212ENST00000557845 EEF2P13639 858 aaKnown RBP19.97■□□□□ 0.79
NEDD4-212ENST00000557845 MAPK4P31152 587 aa19.97■□□□□ 0.79
NEDD4-212ENST00000557845 COG2Q14746 738 aa19.97■□□□□ 0.79
NEDD4-212ENST00000557845 LBX2Q6XYB7 198 aa19.97■□□□□ 0.79
NEDD4-212ENST00000557845 CCAR1Q8IX12 1150 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms