RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 PPIP5K2O43314 1243 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 HOXB4P17483 251 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-247ENST00000557311 COL8A1P27658 744 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 ADH6P28332 368 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 PIP4K2AP48426 406 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-247ENST00000557311 HUNKP57058 714 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 CXCL9Q07325 125 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 LAMC2Q13753 1193 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 HLFQ16534 295 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 BTLAQ7Z6A9 289 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 RAB44Q7Z6P3 723 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-247ENST00000557311 SUPT20HQ8NEM7 779 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 EDARADDQ8WWZ3 215 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 ZNF408Q9H9D4 720 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 KIF7Q2M1P5 1343 aa6.44□□□□□ -1.38
ATXN3-247ENST00000557311 AFDNP55196 1824 aaKnown RBP6.43□□□□□ -1.38
ATXN3-247ENST00000557311 FER1L6Q2WGJ9 1857 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 PRAMEF22A3QJZ6 481 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 ERVV-1B6SEH8 477 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 H7C1D1 291 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 TCERG1O14776 1098 aaKnown RBP6.43□□□□□ -1.38
ATXN3-247ENST00000557311 EPB42P16452 691 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 GMPSP49915 693 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-247ENST00000557311 KIF23Q02241 960 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-247ENST00000557311 SPEM2Q0P670 501 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 TNIP1Q15025 636 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 C11orf91Q3C1V1 193 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 RGMBQ6NW40 437 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 SYT9Q86SS6 491 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 USP48Q86UV5 1035 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 C2orf69Q8N8R5 385 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 BHMTQ93088 406 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 GCC1Q96CN9 775 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 IFT43Q96FT9 208 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 BCL2L13Q9BXK5 485 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 RNF186Q9NXI6 227 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 CXXC1Q9P0U4 656 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-247ENST00000557311 ATP6V0A2Q9Y487 856 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 DLEC1Q9Y238 1755 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 VIRMAQ69YN4 1812 aaKnown RBP6.43□□□□□ -1.38
ATXN3-247ENST00000557311 SLX4Q8IY92 1834 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 NPC1L1Q9UHC9 1359 aa6.43□□□□□ -1.38
ATXN3-247ENST00000557311 ADAMTSL1Q8N6G6 1762 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 FAM155AB1AL88 458 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-247ENST00000557311 TGFBR3LH3BV60 316 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
ATXN3-247ENST00000557311 TRPA1O75762 1119 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 BBOX1O75936 387 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 ARAFP10398 606 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 IDH3AP50213 366 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 TYRO3Q06418 890 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 GRIN2CQ14957 1233 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 PKN2Q16513 984 aaKnown RBP6.42□□□□□ -1.38
ATXN3-247ENST00000557311 AOC3Q16853 763 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 TAF7LQ5H9L4 462 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 CTU1Q7Z7A3 348 aaKnown RBP6.42□□□□□ -1.38
ATXN3-247ENST00000557311 CLP1Q92989 425 aaKnown RBP6.42□□□□□ -1.38
ATXN3-247ENST00000557311 RTFDC1Q9BY42 306 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-247ENST00000557311 GBA2Q9HCG7 927 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-247ENST00000557311 CNOT7Q9UIV1 285 aaKnown RBP6.42□□□□□ -1.38
ATXN3-247ENST00000557311 CDHR2Q9BYE9 1310 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 CEMIPQ8WUJ3 1361 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 SNED1Q8TER0 1413 aa6.42□□□□□ -1.38
ATXN3-247ENST00000557311 DICER1Q9UPY3 1922 aaKnown RBP6.41□□□□□ -1.38
ATXN3-247ENST00000557311 EFSO43281 561 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 HSPA5P11021 654 aaKnown RBP6.41□□□□□ -1.38
ATXN3-247ENST00000557311 ALAS2P22557 587 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 ZNF157P51786 506 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-247ENST00000557311 SLC10A5Q5PT55 438 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 SUSD4Q5VX71 490 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 C16orf46Q6P387 395 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 LINC00114Q6XXX2 140 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 KRT25Q7Z3Z0 450 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 SP8Q8IXZ3 490 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 TRPM4Q8TD43 1214 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 RTF1Q92541 710 aaKnown RBP6.41□□□□□ -1.38
ATXN3-247ENST00000557311 DPF2Q92785 391 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 PHACTR3Q96KR7 559 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 CSRNP1Q96S65 589 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 CCDC88AQ3V6T2 1871 aa6.41□□□□□ -1.38
ATXN3-247ENST00000557311 HTATSF1O43719 755 aaKnown RBP6.4□□□□□ -1.38
ATXN3-247ENST00000557311 RAD17O75943 681 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 MICAL2O94851 1124 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 ARSDP51689 593 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 KIAA2012Q0VF49 1180 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 TAF7Q15545 349 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-247ENST00000557311 OCLNQ16625 522 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 COX20Q5RI15 118 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 ZNF468Q5VIY5 522 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-247ENST00000557311 DPP8Q6V1X1 898 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-247ENST00000557311 KIF6Q6ZMV9 814 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 SLCO4C1Q6ZQN7 724 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 KRT26Q7Z3Y9 468 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 PPP1R42Q7Z4L9 355 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 ZNF34Q8IZ26 560 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 RGL4Q8IZJ4 473 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 NGEFQ8N5V2 710 aa6.4□□□□□ -1.38
ATXN3-247ENST00000557311 DCPSQ96C86 337 aaKnown RBP6.4□□□□□ -1.38
ATXN3-247ENST00000557311 SLC30A3Q99726 388 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms