RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 LRRC4CQ9HCJ2 640 aa5.99□□□□□ -1.45
SUPT16H-206ENST00000556309 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.99□□□□□ -1.45
SUPT16H-206ENST00000556309 CARMIL2Q6F5E8 1435 aa5.99□□□□□ -1.45
SUPT16H-206ENST00000556309 HTR3BO95264 441 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 FUT4P22083 530 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 MCM4P33991 863 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 PDE4BQ07343 736 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 RAD51AP2Q09MP3 1159 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 CWF19L2Q2TBE0 894 aaKnown RBP5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 GK5Q6ZS86 529 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 ZNF654Q8IZM8 581 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 TMEM87BQ96K49 555 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 NT5C1AQ9BXI3 368 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 ACBD3Q9H3P7 528 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 REV1Q9UBZ9 1251 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 KLHL3Q9UH77 587 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 PCDHB14Q9Y5E9 798 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 U3KQE9 123 aa5.98□□□□□ -1.45
SUPT16H-206ENST00000556309 ROBO2Q9HCK4 1378 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 CHURC1-FNTBB4DL54 471 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 DNAJA2O60884 412 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 ERCC5P28715 1186 aaPredicted RBP5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 TNNI2P48788 182 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 CLCQ05315 142 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 PAK2Q13177 524 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 FAM181AQ8N9Y4 354 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 RIN3Q8TB24 985 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 MIPEPQ99797 713 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 LRRC3Q9BY71 257 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 PRDM10Q9NQV6 1147 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 VAV3Q9UKW4 847 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 TACC3Q9Y6A5 838 aa5.97□□□□□ -1.45
SUPT16H-206ENST00000556309 LRIG2O94898 1065 aa5.96□□□□□ -1.46
SUPT16H-206ENST00000556309 SLITRK5O94991 958 aa5.96□□□□□ -1.46
SUPT16H-206ENST00000556309 CST3P01034 146 aaPredicted RBP5.96□□□□□ -1.46
SUPT16H-206ENST00000556309 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
SUPT16H-206ENST00000556309 MCATQ8IVS2 390 aaKnown RBP5.96□□□□□ -1.46
SUPT16H-206ENST00000556309 FAM13CQ8NE31 585 aa5.96□□□□□ -1.46
SUPT16H-206ENST00000556309 RC3H2Q9HBD1 1191 aaKnown RBP5.96□□□□□ -1.46
SUPT16H-206ENST00000556309 MKNK2Q9HBH9 465 aa5.96□□□□□ -1.46
SUPT16H-206ENST00000556309 CNTNAP4Q9C0A0 1308 aa5.96□□□□□ -1.46
SUPT16H-206ENST00000556309 SLC6A19Q695T7 634 aa5.95□□□□□ -1.46
SUPT16H-206ENST00000556309 CDH24Q86UP0 819 aa5.95□□□□□ -1.46
SUPT16H-206ENST00000556309 SLITRK4Q8IW52 837 aa5.95□□□□□ -1.46
SUPT16H-206ENST00000556309 MRPL41Q8IXM3 137 aaKnown RBP5.95□□□□□ -1.46
SUPT16H-206ENST00000556309 HEXIM2Q96MH2 286 aaKnown RBP5.95□□□□□ -1.46
SUPT16H-206ENST00000556309 ANTXR1Q9H6X2 564 aa5.95□□□□□ -1.46
SUPT16H-206ENST00000556309 ADAM30Q9UKF2 790 aa5.95□□□□□ -1.46
SUPT16H-206ENST00000556309 PRR36Q9H6K5 1346 aa5.95□□□□□ -1.46
SUPT16H-206ENST00000556309 EOMESO95936 686 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 CAP2P40123 477 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 RAP1GAPP47736 663 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 PRKCQQ04759 706 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 TMEM201Q5SNT2 666 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 LETMD1Q6P1Q0 360 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 LILRA6Q6PI73 481 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 PI4K2BQ8TCG2 481 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 NETO1Q8TDF5 533 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 TGIF2Q9GZN2 237 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 CCSER2Q9H7U1 834 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 NCANO14594 1321 aa5.94□□□□□ -1.46
SUPT16H-206ENST00000556309 PRRG2O14669 202 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 TSPAN15O95858 294 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 ITIH2P19823 946 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 ZNF165P49910 485 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 ARSHQ5FYA8 562 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 FBXW10Q5XX13 1052 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 ARHGAP27Q6ZUM4 889 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 FAM214BQ7L5A3 538 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 PLD6Q8N2A8 252 aaKnown RBP5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 MFSD2AQ8NA29 543 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 BAHD1Q8TBE0 780 aaPredicted RBP5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 GPRASP2Q96D09 838 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 GINM1Q9NU53 330 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 TPX2Q9ULW0 747 aaKnown RBP5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 PPT2Q9UMR5 302 aa5.93□□□□□ -1.46
SUPT16H-206ENST00000556309 SLC22A31A6NKX4 558 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 YARSP54577 528 aaKnown RBP5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 MESP2Q0VG99 397 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 OVOS1Q6IE37 1185 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 CCDC81Q6ZN84 652 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 PHACTR4Q8IZ21 702 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 FLAD1Q8NFF5 587 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 KIF2CQ99661 725 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 EHMT1Q9H9B1 1298 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 CAPN10Q9HC96 672 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 IGSF5Q9NSI5 407 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 EFR3BQ9Y2G0 817 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 INPP5FQ9Y2H2 1132 aa5.92□□□□□ -1.46
SUPT16H-206ENST00000556309 LRRC10BA6NIK2 292 aa5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 PRR33A8MZF0 331 aa5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 ATE1O95260 518 aa5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 CBX7O95931 251 aa5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 POLR2BP30876 1174 aaKnown RBP5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 SLC23A3Q6PIS1 610 aa5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 SPRED2Q7Z698 418 aa5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 REXO1Q8N1G1 1221 aaKnown RBP5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 PPP1R13LQ8WUF5 828 aa5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 FERD3LQ96RJ6 166 aa5.91□□□□□ -1.46
SUPT16H-206ENST00000556309 PRDM5Q9NQX1 630 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms