RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 SPOCD1Q6ZMY3 1216 aa7.59□□□□□ -1.19
SCFD1-217ENST00000555953 CILP2Q8IUL8 1156 aa7.59□□□□□ -1.19
SCFD1-217ENST00000555953 PPP1R13LQ8WUF5 828 aa7.59□□□□□ -1.19
SCFD1-217ENST00000555953 CEP131Q9UPN4 1083 aa7.59□□□□□ -1.19
SCFD1-217ENST00000555953 RALGPS1Q5JS13 557 aa7.58□□□□□ -1.2
SCFD1-217ENST00000555953 BNC2Q6ZN30 1099 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-217ENST00000555953 TMPRSS7Q7RTY8 843 aa7.58□□□□□ -1.2
SCFD1-217ENST00000555953 TMC4Q7Z404 712 aa7.58□□□□□ -1.2
SCFD1-217ENST00000555953 TTC6Q86TZ1 520 aa7.58□□□□□ -1.2
SCFD1-217ENST00000555953 AEBP1Q8IUX7 1158 aa7.58□□□□□ -1.2
SCFD1-217ENST00000555953 CCDC120Q96HB5 630 aa7.58□□□□□ -1.2
SCFD1-217ENST00000555953 DUSP15Q9H1R2 295 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-217ENST00000555953 USP31Q70CQ4 1352 aa7.58□□□□□ -1.2
SCFD1-217ENST00000555953 UPK3BL1B0FP48 263 aa7.57□□□□□ -1.2
SCFD1-217ENST00000555953 UPK3BL2E5RIL1 263 aa7.57□□□□□ -1.2
SCFD1-217ENST00000555953 PLCG1P19174 1290 aa7.57□□□□□ -1.2
SCFD1-217ENST00000555953 CYB5D2Q8WUJ1 264 aa7.57□□□□□ -1.2
SCFD1-217ENST00000555953 FAM221AA4D161 298 aa7.56□□□□□ -1.2
SCFD1-217ENST00000555953 CILPO75339 1184 aa7.56□□□□□ -1.2
SCFD1-217ENST00000555953 ERVFC1P60507 584 aa7.56□□□□□ -1.2
SCFD1-217ENST00000555953 XPCQ01831 940 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-217ENST00000555953 CAMK2GQ13555 558 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-217ENST00000555953 GAB4Q2WGN9 574 aa7.56□□□□□ -1.2
SCFD1-217ENST00000555953 FBXO33Q7Z6M2 555 aa7.56□□□□□ -1.2
SCFD1-217ENST00000555953 CCDC84Q86UT8 332 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-217ENST00000555953 CREG2Q8IUH2 290 aa7.56□□□□□ -1.2
SCFD1-217ENST00000555953 FAM13CQ8NE31 585 aa7.56□□□□□ -1.2
SCFD1-217ENST00000555953 DIRC2Q96SL1 478 aa7.56□□□□□ -1.2
SCFD1-217ENST00000555953 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
SCFD1-217ENST00000555953 TSPAN15O95858 294 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 F13A1P00488 732 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 PF4P02776 101 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 TPP2P29144 1249 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-217ENST00000555953 RAP1GAPP47736 663 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 HK2P52789 917 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 LMNB2Q03252 620 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 TMEM201Q5SNT2 666 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 LCE4AQ5TA78 99 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 SYDE1Q6ZW31 735 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-217ENST00000555953 DTWD2Q8NBA8 298 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 ABHD4Q8TB40 342 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 TMEM59LQ9UK28 342 aa7.55□□□□□ -1.2
SCFD1-217ENST00000555953 BPNT1O95861 308 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 KRT1P04264 644 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 SRFP11831 508 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 RAC2P15153 192 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 GATAD2BQ8WXI9 593 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 CRELD1Q96HD1 420 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 RHOVQ96L33 236 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 ADAMTS10Q9H324 1103 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 TRIT1Q9H3H1 467 aaKnown RBP7.54□□□□□ -1.2
SCFD1-217ENST00000555953 NSUN3Q9H649 340 aaKnown RBP7.54□□□□□ -1.2
SCFD1-217ENST00000555953 KCNK12Q9HB15 430 aa7.54□□□□□ -1.2
SCFD1-217ENST00000555953 YARSP54577 528 aaKnown RBP7.53□□□□□ -1.2
SCFD1-217ENST00000555953 TAGLNQ01995 201 aaKnown RBP7.53□□□□□ -1.2
SCFD1-217ENST00000555953 FBLN7Q53RD9 439 aa7.53□□□□□ -1.2
SCFD1-217ENST00000555953 GPR62Q9BZJ7 368 aa7.53□□□□□ -1.2
SCFD1-217ENST00000555953 LRRN2O75325 713 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 HPXP02790 462 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 CFPP27918 469 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 DIEXFQ68CQ4 756 aaKnown RBP7.52□□□□□ -1.21
SCFD1-217ENST00000555953 TSPYL5Q86VY4 417 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-217ENST00000555953 C1QL4Q86Z23 238 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 SLFN12Q8IYM2 578 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 FBXO15Q8NCQ5 510 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-217ENST00000555953 RNF141Q8WVD5 230 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 MYLIPQ8WY64 445 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 TMEM74Q96NL1 305 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 GPATCH2Q9NW75 528 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 REV1Q9UBZ9 1251 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 DUSP13Q9UII6 198 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 POLR3KQ9Y2Y1 108 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-217ENST00000555953 PRR36Q9H6K5 1346 aa7.52□□□□□ -1.21
SCFD1-217ENST00000555953 SORBS3O60504 671 aa7.51□□□□□ -1.21
SCFD1-217ENST00000555953 C1QTNF9P0C862 333 aa7.51□□□□□ -1.21
SCFD1-217ENST00000555953 TRHRP34981 398 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-217ENST00000555953 EGR3Q06889 387 aa7.51□□□□□ -1.21
SCFD1-217ENST00000555953 SP110Q9HB58 689 aa7.51□□□□□ -1.21
SCFD1-217ENST00000555953 KCNH3Q9ULD8 1083 aa7.51□□□□□ -1.21
SCFD1-217ENST00000555953 CHURC1-FNTBB4DL54 471 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 GRIN3BO60391 1043 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 DNAJA2O60884 412 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 GBP2P32456 591 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-217ENST00000555953 FAM160A1Q05DH4 1040 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 BAHD1Q8TBE0 780 aaPredicted RBP7.5□□□□□ -1.21
SCFD1-217ENST00000555953 TOX2Q96NM4 488 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 RSRP1Q9BUV0 290 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 EPB41L4BQ9H329 900 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 VTI1BQ9UEU0 232 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 KLHL3Q9UH77 587 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 PCDHA11Q9Y5I1 949 aa7.5□□□□□ -1.21
SCFD1-217ENST00000555953 HTR3BO95264 441 aa7.49□□□□□ -1.21
SCFD1-217ENST00000555953 ZGLP1P0C6A0 271 aa7.49□□□□□ -1.21
SCFD1-217ENST00000555953 TNNI2P48788 182 aa7.49□□□□□ -1.21
SCFD1-217ENST00000555953 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
SCFD1-217ENST00000555953 ANKLE2Q86XL3 938 aa7.49□□□□□ -1.21
SCFD1-217ENST00000555953 RELL1Q8IUW5 271 aa7.49□□□□□ -1.21
SCFD1-217ENST00000555953 LRRC56Q8IYG6 542 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-217ENST00000555953 FBXO27Q8NI29 283 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms