RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CYP8B1Q9UNU6 501 aa6.87□□□□□ -1.31
SRP54-207ENST00000555535 OTOL1A6NHN0 477 aaPredicted RBP6.86□□□□□ -1.31
SRP54-207ENST00000555535 ZGLP1P0C6A0 271 aa6.86□□□□□ -1.31
SRP54-207ENST00000555535 CHRNEQ04844 493 aa6.86□□□□□ -1.31
SRP54-207ENST00000555535 B4GALNT3Q6L9W6 998 aa6.86□□□□□ -1.31
SRP54-207ENST00000555535 MPRIPQ6WCQ1 1025 aa6.86□□□□□ -1.31
SRP54-207ENST00000555535 GRIN3AQ8TCU5 1115 aa6.86□□□□□ -1.31
SRP54-207ENST00000555535 GPATCH2Q9NW75 528 aa6.86□□□□□ -1.31
SRP54-207ENST00000555535 IRAK3Q9Y616 596 aa6.86□□□□□ -1.31
SRP54-207ENST00000555535 PRAMEF27A3QJZ7 478 aa6.85□□□□□ -1.31
SRP54-207ENST00000555535 HRKO00198 91 aa6.85□□□□□ -1.31
SRP54-207ENST00000555535 GPR182O15218 404 aa6.85□□□□□ -1.31
SRP54-207ENST00000555535 CST3P01034 146 aaPredicted RBP6.85□□□□□ -1.31
SRP54-207ENST00000555535 ETV3P41162 512 aa6.85□□□□□ -1.31
SRP54-207ENST00000555535 ARHGAP4P98171 946 aa6.85□□□□□ -1.31
SRP54-207ENST00000555535 C19orf44Q9H6X5 657 aa6.85□□□□□ -1.31
SRP54-207ENST00000555535 FBRSQ9HAH7 460 aa6.85□□□□□ -1.31
SRP54-207ENST00000555535 PPM1HQ9ULR3 514 aa6.85□□□□□ -1.31
SRP54-207ENST00000555535 PPP1R15AO75807 674 aaPredicted RBP6.84□□□□□ -1.31
SRP54-207ENST00000555535 IGHA2P01877 340 aa6.84□□□□□ -1.31
SRP54-207ENST00000555535 TPP2P29144 1249 aaPredicted RBP6.84□□□□□ -1.31
SRP54-207ENST00000555535 AFF3P51826 1226 aaKnown RBP6.84□□□□□ -1.31
SRP54-207ENST00000555535 ETF1P62495 437 aaKnown RBP6.84□□□□□ -1.31
SRP54-207ENST00000555535 EFEMP1Q12805 493 aa6.84□□□□□ -1.31
SRP54-207ENST00000555535 GAB4Q2WGN9 574 aa6.84□□□□□ -1.31
SRP54-207ENST00000555535 RIN3Q8TB24 985 aa6.84□□□□□ -1.31
SRP54-207ENST00000555535 ZC3H12DA2A288 527 aaKnown RBP6.83□□□□□ -1.32
SRP54-207ENST00000555535 EGR3Q06889 387 aa6.83□□□□□ -1.32
SRP54-207ENST00000555535 SSPNQ14714 243 aa6.83□□□□□ -1.32
SRP54-207ENST00000555535 DACT3Q96B18 629 aaPredicted RBP6.83□□□□□ -1.32
SRP54-207ENST00000555535 DUSP13Q9UII6 198 aa6.83□□□□□ -1.32
SRP54-207ENST00000555535 SNCAIPQ9Y6H5 919 aa6.83□□□□□ -1.32
SRP54-207ENST00000555535 ADAMTS20P59510 1910 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 OR14I1A6ND48 311 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 ENC1O14682 589 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 PI3P19957 117 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 GSTT1P30711 240 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 DUSP4Q13115 394 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 NKG7Q16617 165 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 PRAMEF13Q5VWM6 474 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 SGPP1Q9BX95 441 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 SRCIN1Q9C0H9 1055 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 MYRFQ9Y2G1 1151 aa6.82□□□□□ -1.32
SRP54-207ENST00000555535 SLC22A31A6NKX4 558 aa6.81□□□□□ -1.32
SRP54-207ENST00000555535 LRFN4Q6PJG9 635 aa6.81□□□□□ -1.32
SRP54-207ENST00000555535 TPTE2Q6XPS3 522 aa6.81□□□□□ -1.32
SRP54-207ENST00000555535 ANKS4BQ8N8V4 417 aa6.81□□□□□ -1.32
SRP54-207ENST00000555535 ANKRD24Q8TF21 1146 aa6.81□□□□□ -1.32
SRP54-207ENST00000555535 PPP1R13LQ8WUF5 828 aa6.81□□□□□ -1.32
SRP54-207ENST00000555535 DUSP15Q9H1R2 295 aaPredicted RBP6.81□□□□□ -1.32
SRP54-207ENST00000555535 LUC7LQ9NQ29 371 aaKnown RBP6.81□□□□□ -1.32
SRP54-207ENST00000555535 GPR160Q9UJ42 338 aa6.81□□□□□ -1.32
SRP54-207ENST00000555535 CNOT11Q9UKZ1 510 aaKnown RBP6.81□□□□□ -1.32
SRP54-207ENST00000555535 INPP5AQ14642 412 aa6.8□□□□□ -1.32
SRP54-207ENST00000555535 TIGD5Q53EQ6 642 aa6.8□□□□□ -1.32
SRP54-207ENST00000555535 NXPE4Q6UWF7 544 aa6.8□□□□□ -1.32
SRP54-207ENST00000555535 FRMD5Q7Z6J6 570 aa6.8□□□□□ -1.32
SRP54-207ENST00000555535 C3orf58Q8NDZ4 430 aa6.8□□□□□ -1.32
SRP54-207ENST00000555535 PLPPR2Q96GM1 343 aa6.8□□□□□ -1.32
SRP54-207ENST00000555535 GPR62Q9BZJ7 368 aa6.8□□□□□ -1.32
SRP54-207ENST00000555535 SIRT5Q9NXA8 310 aa6.8□□□□□ -1.32
SRP54-207ENST00000555535 TACC3Q9Y6A5 838 aa6.8□□□□□ -1.32
SRP54-207ENST00000555535 LTKP29376 864 aa6.79□□□□□ -1.32
SRP54-207ENST00000555535 OLFML2BQ68BL8 750 aa6.79□□□□□ -1.32
SRP54-207ENST00000555535 CDH24Q86UP0 819 aa6.79□□□□□ -1.32
SRP54-207ENST00000555535 TSPYL5Q86VY4 417 aaPredicted RBP6.79□□□□□ -1.32
SRP54-207ENST00000555535 FEZF2Q8TBJ5 459 aa6.79□□□□□ -1.32
SRP54-207ENST00000555535 KCNH3Q9ULD8 1083 aa6.79□□□□□ -1.32
SRP54-207ENST00000555535 PAGE1O75459 146 aa6.78□□□□□ -1.32
SRP54-207ENST00000555535 PLP2Q04941 152 aa6.78□□□□□ -1.32
SRP54-207ENST00000555535 PI16Q6UXB8 463 aa6.78□□□□□ -1.32
SRP54-207ENST00000555535 RBCK1Q9BYM8 510 aa6.78□□□□□ -1.32
SRP54-207ENST00000555535 MBD1Q9UIS9 605 aaPredicted RBP6.78□□□□□ -1.32
SRP54-207ENST00000555535 N4BP3O15049 544 aa6.77□□□□□ -1.33
SRP54-207ENST00000555535 SRSF3P84103 164 aaKnown RBP6.77□□□□□ -1.33
SRP54-207ENST00000555535 XAGE3Q8WTP9 111 aa6.77□□□□□ -1.33
SRP54-207ENST00000555535 PALD1Q9ULE6 856 aa6.77□□□□□ -1.33
SRP54-207ENST00000555535 INSRRP14616 1297 aa6.76□□□□□ -1.33
SRP54-207ENST00000555535 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.76□□□□□ -1.33
SRP54-207ENST00000555535 MRPL41Q8IXM3 137 aaKnown RBP6.76□□□□□ -1.33
SRP54-207ENST00000555535 ZDHHC14Q8IZN3 488 aa6.76□□□□□ -1.33
SRP54-207ENST00000555535 PANK1Q8TE04 598 aa6.76□□□□□ -1.33
SRP54-207ENST00000555535 Q96M66 194 aa6.76□□□□□ -1.33
SRP54-207ENST00000555535 GPR20Q99678 358 aa6.76□□□□□ -1.33
SRP54-207ENST00000555535 WASH4PA8MWX3 477 aa6.75□□□□□ -1.33
SRP54-207ENST00000555535 SUV39H1O43463 412 aa6.75□□□□□ -1.33
SRP54-207ENST00000555535 PUM1Q14671 1186 aaKnown RBP eCLIP6.75□□□□□ -1.33
SRP54-207ENST00000555535 WIPI1Q5MNZ9 446 aaPredicted RBP6.75□□□□□ -1.33
SRP54-207ENST00000555535 PCNX4Q63HM2 1172 aa6.75□□□□□ -1.33
SRP54-207ENST00000555535 SHISA4Q96DD7 197 aa6.75□□□□□ -1.33
SRP54-207ENST00000555535 ABLIM1O14639 778 aa6.74□□□□□ -1.33
SRP54-207ENST00000555535 GRK4P32298 578 aa6.74□□□□□ -1.33
SRP54-207ENST00000555535 SERPINB4P48594 390 aa6.74□□□□□ -1.33
SRP54-207ENST00000555535 ADGRF1Q5T601 910 aa6.74□□□□□ -1.33
SRP54-207ENST00000555535 SLC6A19Q695T7 634 aa6.74□□□□□ -1.33
SRP54-207ENST00000555535 PCDHA11Q9Y5I1 949 aa6.74□□□□□ -1.33
SRP54-207ENST00000555535 IRS4O14654 1257 aaPredicted RBP6.73□□□□□ -1.33
SRP54-207ENST00000555535 GIPC1O14908 333 aa6.73□□□□□ -1.33
SRP54-207ENST00000555535 CILPO75339 1184 aa6.73□□□□□ -1.33
SRP54-207ENST00000555535 RASIP1Q5U651 963 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms