RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SWAP70Q9UH65 585 aa16.39■□□□□ 0.21
SNX6-203ENST00000555416 MINDY4BA8MYZ0 360 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 C19orf81C9J6K1 198 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 PATL2C9JE40 543 aaKnown RBP16.38■□□□□ 0.21
SNX6-203ENST00000555416 APPP05067 770 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 LRRFIP1Q32MZ4 808 aaKnown RBP16.38■□□□□ 0.21
SNX6-203ENST00000555416 KIAA1755Q5JYT7 1200 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 IFNL3Q8IZI9 196 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 RILPL2Q969X0 211 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 DDRGK1Q96HY6 314 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 CABP5Q9NP86 173 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 ARPP21Q9UBL0 812 aaPredicted RBP16.38■□□□□ 0.21
SNX6-203ENST00000555416 PTPN22Q9Y2R2 807 aa16.38■□□□□ 0.21
SNX6-203ENST00000555416 MYH8P13535 1937 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 GNAT2P19087 354 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 PSMC4P43686 418 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 NMIQ13287 307 aaPredicted RBP16.37■□□□□ 0.21
SNX6-203ENST00000555416 USP17L2Q6R6M4 530 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 ZNF589Q86UQ0 364 aaPredicted RBP16.37■□□□□ 0.21
SNX6-203ENST00000555416 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 P2RX7Q99572 595 aaKnown RBP16.37■□□□□ 0.21
SNX6-203ENST00000555416 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.37■□□□□ 0.21
SNX6-203ENST00000555416 KIAA1683Q9H0B3 1180 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 TMOD4Q9NZQ9 345 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 TACC3Q9Y6A5 838 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 CENPFP49454 3210 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 ROBO3Q96MS0 1386 aa16.37■□□□□ 0.21
SNX6-203ENST00000555416 RASA1P20936 1047 aa16.36■□□□□ 0.21
SNX6-203ENST00000555416 HOXA7P31268 230 aaPredicted RBP16.36■□□□□ 0.21
SNX6-203ENST00000555416 TDO2P48775 406 aa16.36■□□□□ 0.21
SNX6-203ENST00000555416 TMEM179Q6ZVK1 233 aa16.36■□□□□ 0.21
SNX6-203ENST00000555416 AMOTL1Q8IY63 956 aa16.36■□□□□ 0.21
SNX6-203ENST00000555416 SMCR8Q8TEV9 937 aaPredicted RBP16.36■□□□□ 0.21
SNX6-203ENST00000555416 C12orf42Q96LP6 360 aa16.36■□□□□ 0.21
SNX6-203ENST00000555416 FEZ1Q99689 392 aa16.36■□□□□ 0.21
SNX6-203ENST00000555416 PTCH2Q9Y6C5 1203 aa16.36■□□□□ 0.21
SNX6-203ENST00000555416 VCAM1P19320 739 aa16.35■□□□□ 0.21
SNX6-203ENST00000555416 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
SNX6-203ENST00000555416 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
SNX6-203ENST00000555416 HELLSQ9NRZ9 838 aa16.35■□□□□ 0.21
SNX6-203ENST00000555416 PRDM1O75626 825 aa16.34■□□□□ 0.21
SNX6-203ENST00000555416 GSPT1P15170 499 aaKnown RBP16.34■□□□□ 0.21
SNX6-203ENST00000555416 SDSP20132 328 aa16.34■□□□□ 0.21
SNX6-203ENST00000555416 OSBPP22059 807 aa16.34■□□□□ 0.21
SNX6-203ENST00000555416 SKAP1Q86WV1 359 aa16.34■□□□□ 0.21
SNX6-203ENST00000555416 CCDC17Q96LX7 622 aa16.34■□□□□ 0.21
SNX6-203ENST00000555416 PNMA3Q9UL41 463 aa16.34■□□□□ 0.21
SNX6-203ENST00000555416 TAOK2Q9UL54 1235 aa16.34■□□□□ 0.21
SNX6-203ENST00000555416 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.21
SNX6-203ENST00000555416 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
SNX6-203ENST00000555416 SOX10P56693 466 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 HERVK_113P62684 666 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 IRX3P78415 501 aaPredicted RBP16.33■□□□□ 0.2
SNX6-203ENST00000555416 ICA1Q05084 483 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 PPARAQ07869 468 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 PABPC4Q13310 644 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNX6-203ENST00000555416 KIF22Q14807 665 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 MCMDC2Q4G0Z9 681 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 NAPBQ9H115 298 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 RBPJLQ9UBG7 517 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 GABRQQ9UN88 632 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 MGAMO43451 1857 aa16.33■□□□□ 0.2
SNX6-203ENST00000555416 EEF2P13639 858 aaKnown RBP16.32■□□□□ 0.2
SNX6-203ENST00000555416 USP14P54578 494 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 PRKCZQ05513 592 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 TTC22Q5TAA0 569 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 CATSPERGQ6ZRH7 1159 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 NACAP1Q9BZK3 213 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 IL25Q9H293 177 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 RPAP3Q9H6T3 665 aaPredicted RBP16.32■□□□□ 0.2
SNX6-203ENST00000555416 MORF4L1Q9UBU8 362 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 SRRDQ9UH36 339 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
SNX6-203ENST00000555416 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
SNX6-203ENST00000555416 Q3C1V9 767 aa16.31■□□□□ 0.2
SNX6-203ENST00000555416 SPICE1Q8N0Z3 855 aa16.31■□□□□ 0.2
SNX6-203ENST00000555416 MKNK2Q9HBH9 465 aa16.31■□□□□ 0.2
SNX6-203ENST00000555416 DOCK3Q8IZD9 2030 aa16.31■□□□□ 0.2
SNX6-203ENST00000555416 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 IGKV6D-41A0A0C4DH26 115 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 CNMDO75829 334 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 FGAP02671 866 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 HSPD1P10809 573 aaKnown RBP16.3■□□□□ 0.2
SNX6-203ENST00000555416 FCGRTP55899 365 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 ARHGEF6Q15052 776 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 ALX1Q15699 326 aa16.3■□□□□ 0.2
SNX6-203ENST00000555416 FAM47AQ5JRC9 791 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms