RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 NYAP2Q9P242 653 aa19.37■□□□□ 0.69
SPTLC2-203ENST00000554901 C1QTNF8P60827 252 aa19.36■□□□□ 0.69
SPTLC2-203ENST00000554901 ICA1Q05084 483 aa19.36■□□□□ 0.69
SPTLC2-203ENST00000554901 RGMBQ6NW40 437 aa19.36■□□□□ 0.69
SPTLC2-203ENST00000554901 BLOC1S2Q6QNY1 142 aa19.36■□□□□ 0.69
SPTLC2-203ENST00000554901 TMEM87BQ96K49 555 aa19.36■□□□□ 0.69
SPTLC2-203ENST00000554901 ELP3Q9H9T3 547 aa19.36■□□□□ 0.69
SPTLC2-203ENST00000554901 ZSWIM6Q9HCJ5 1215 aa19.36■□□□□ 0.69
SPTLC2-203ENST00000554901 ATAD5Q96QE3 1844 aa19.36■□□□□ 0.69
SPTLC2-203ENST00000554901 TTLL1O95922 423 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 ZBTB48P10074 688 aaPredicted RBP19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 PPIL2Q13356 520 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 CYB5R4Q7L1T6 521 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 DGKHQ86XP1 1220 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 CCDC102AQ96A19 550 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 CEP95Q96GE4 821 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 ZSCAN10Q96SZ4 725 aaPredicted RBP19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 SH2D4AQ9H788 454 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 IL17RBQ9NRM6 502 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 ERICH2A1L162 156 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 RASSF10A6NK89 507 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 CASTP20810 708 aaKnown RBP19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 SHROOM1Q2M3G4 852 aaPredicted RBP19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 ZNF280CQ8ND82 737 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 ANKS1AQ92625 1134 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 MKL1Q969V6 931 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 OPTNQ96CV9 577 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 ARHGEF10LQ9HCE6 1279 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 CYP46A1Q9Y6A2 500 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 ZHX2Q9Y6X8 837 aa19.35■□□□□ 0.69
SPTLC2-203ENST00000554901 CXCL11O14625 94 aa19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 PRC1O43663 620 aa19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 ZNF157P51786 506 aaPredicted RBP19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 ANTXR2P58335 489 aa19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 EXOSC10Q01780 885 aaKnown RBP19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 RUFY3Q7L099 469 aa19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 FBXL16Q8N461 479 aa19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 NKX2-3Q8TAU0 364 aa19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 KCNH4Q9UQ05 1017 aa19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 AFG3L2Q9Y4W6 797 aa19.34■□□□□ 0.69
SPTLC2-203ENST00000554901 TNKSO95271 1327 aa19.33■□□□□ 0.69
SPTLC2-203ENST00000554901 EEF2P13639 858 aaKnown RBP19.33■□□□□ 0.68
SPTLC2-203ENST00000554901 RPS6KB1P23443 525 aa19.33■□□□□ 0.68
SPTLC2-203ENST00000554901 TMTC2Q8N394 836 aa19.33■□□□□ 0.68
SPTLC2-203ENST00000554901 OTUD5Q96G74 571 aa19.33■□□□□ 0.68
SPTLC2-203ENST00000554901 WNK4Q96J92 1243 aa19.33■□□□□ 0.68
SPTLC2-203ENST00000554901 KIAA1683Q9H0B3 1180 aa19.33■□□□□ 0.68
SPTLC2-203ENST00000554901 TMX2Q9Y320 296 aa19.33■□□□□ 0.68
SPTLC2-203ENST00000554901 C19orf81C9J6K1 198 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 USP17L10C9JJH3 530 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 IFIT3O14879 490 aaKnown RBP19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 SLC10A3P09131 477 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 LIFRP42702 1097 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 SEC23AQ15436 765 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 SPRYD7Q5W111 196 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 RASAL3Q86YV0 1011 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 SIAH1Q8IUQ4 282 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 ENAHQ8N8S7 591 aaPredicted RBP19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 IGDCC4Q8TDY8 1250 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 STX8Q9UNK0 236 aa19.32■□□□□ 0.68
SPTLC2-203ENST00000554901 IRF6O14896 467 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 NMT2O60551 498 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 TOP1P11387 765 aaKnown RBP19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 HSPA6P17066 643 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 USP14P54578 494 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 SPP2Q13103 211 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 DEFB115Q30KQ5 88 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 RCSD1Q6JBY9 416 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 KIF2CQ99661 725 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 ZKSCAN3Q9BRR0 538 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 CLIP2Q9UDT6 1046 aa19.31■□□□□ 0.68
SPTLC2-203ENST00000554901 ECE1P42892 770 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 BACE1P56817 501 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 WTAPQ15007 396 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 TMEM67Q5HYA8 995 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 SH3D19Q5HYK7 790 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 IFIT1BQ5T764 474 aaKnown RBP19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 FEZ1Q99689 392 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 AGXT2Q9BYV1 514 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 ALDH8A1Q9H2A2 487 aaPredicted RBP19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 TRIM75PA6NK02 468 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 SH2B2O14492 632 aaPredicted RBP19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 GTF2A2P52657 109 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 SNAPC2Q13487 334 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 RABEP1Q15276 862 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 CHST3Q7LGC8 479 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 CCDC84Q86UT8 332 aaPredicted RBP19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 CLEC10AQ8IUN9 316 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 ACER1Q8TDN7 264 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 UPF3BQ9BZI7 483 aaKnown RBP19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 GOPCQ9HD26 462 aa19.3■□□□□ 0.68
SPTLC2-203ENST00000554901 PHIPQ8WWQ0 1821 aa19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 A0A0G2JLL6 359 aaPredicted RBP19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 A0A1W2PRG0 241 aa19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 GJA5P36382 358 aa19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 ATP2B2Q01814 1243 aa19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 COL9A3Q14050 684 aaPredicted RBP19.29■□□□□ 0.68
SPTLC2-203ENST00000554901 PRRT2Q7Z6L0 340 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms