RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 ABCC6O95255 1503 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 TRPM1Q7Z4N2 1603 aa6.84□□□□□ -1.31
ATXN3-228ENST00000554592 IGSF1Q8N6C5 1336 aa6.84□□□□□ -1.31
ATXN3-228ENST00000554592 PDE2AO00408 941 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-228ENST00000554592 TXNDC11Q6PKC3 985 aa6.84□□□□□ -1.31
ATXN3-228ENST00000554592 HDGFL2Q7Z4V5 671 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-228ENST00000554592 ZSCAN29Q8IWY8 852 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-228ENST00000554592 TMC1Q8TDI8 760 aa6.84□□□□□ -1.31
ATXN3-228ENST00000554592 NXPE3Q969Y0 559 aa6.84□□□□□ -1.31
ATXN3-228ENST00000554592 OSMRQ99650 979 aa6.84□□□□□ -1.31
ATXN3-228ENST00000554592 NHSQ6T4R5 1651 aa6.84□□□□□ -1.32
ATXN3-228ENST00000554592 CGNL1Q0VF96 1302 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 NFAT5O94916 1531 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 PTPRAP18433 802 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 AMPHP49418 695 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 RBM25P49756 843 aaKnown RBP6.83□□□□□ -1.32
ATXN3-228ENST00000554592 PRELPP51888 382 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 FOXD4L6Q3SYB3 417 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-228ENST00000554592 FOXD4L3Q6VB84 417 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-228ENST00000554592 JMYQ8N9B5 988 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 SMARCC1Q92922 1105 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-228ENST00000554592 CITED4Q96RK1 184 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 LATS2Q9NRM7 1088 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 TERF2IPQ9NYB0 399 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 KCNK4Q9NYG8 393 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 WWC3Q9ULE0 1092 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
ATXN3-228ENST00000554592 NSD2O96028 1365 aa6.82□□□□□ -1.32
ATXN3-228ENST00000554592 RBM47A0AV96 593 aaKnown RBP6.82□□□□□ -1.32
ATXN3-228ENST00000554592 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-228ENST00000554592 FSCN2O14926 492 aa6.82□□□□□ -1.32
ATXN3-228ENST00000554592 IREB2P48200 963 aaKnown RBP6.82□□□□□ -1.32
ATXN3-228ENST00000554592 TGFB2P61812 414 aa6.82□□□□□ -1.32
ATXN3-228ENST00000554592 FSTL1Q12841 308 aa6.82□□□□□ -1.32
ATXN3-228ENST00000554592 Q6ZS46 218 aa6.82□□□□□ -1.32
ATXN3-228ENST00000554592 MEGF10Q96KG7 1140 aa6.82□□□□□ -1.32
ATXN3-228ENST00000554592 BCL2L13Q9BXK5 485 aa6.82□□□□□ -1.32
ATXN3-228ENST00000554592 MRPL18Q9H0U6 180 aaKnown RBP6.82□□□□□ -1.32
ATXN3-228ENST00000554592 SLC12A5Q9H2X9 1139 aa6.82□□□□□ -1.32
ATXN3-228ENST00000554592 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
ATXN3-228ENST00000554592 DYRK3O43781 588 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 ADAM11O75078 769 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 ALX3O95076 343 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 WISP1O95388 367 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 POLR3DP05423 398 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-228ENST00000554592 EDN3P14138 238 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 HOXC9P31274 260 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 USPL1Q5W0Q7 1092 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 MPRIPQ6WCQ1 1025 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 ARHGAP27Q6ZUM4 889 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.81□□□□□ -1.32
ATXN3-228ENST00000554592 FBXO33Q7Z6M2 555 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 GALNT12Q8IXK2 581 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 C16orf71Q8IYS4 520 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-228ENST00000554592 DZIP1LQ8IYY4 767 aaKnown RBP6.81□□□□□ -1.32
ATXN3-228ENST00000554592 RAPGEF4Q8WZA2 1011 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 COG3Q96JB2 828 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 BHLHE41Q9C0J9 482 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-228ENST00000554592 SEMA6BQ9H3T3 888 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
ATXN3-228ENST00000554592 AKAP12Q02952 1782 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 UNCXA6NJT0 531 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 H3BRJ5 948 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 GPR182O15218 404 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 TREHO43280 583 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 H2AFB1P0C5Y9 115 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 H2AFB2P0C5Z0 115 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 CDC25BP30305 580 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 CD68P34810 354 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-228ENST00000554592 TAGLNQ01995 201 aaKnown RBP6.8□□□□□ -1.32
ATXN3-228ENST00000554592 NBPF6Q5VWK0 638 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 HGSNATQ68CP4 663 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 VN1R5Q7Z5H4 357 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 Q8N3U1 123 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 KLHDC7BQ96G42 594 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 NBPF4Q96M43 638 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 PUS7Q96PZ0 661 aaKnown RBP6.8□□□□□ -1.32
ATXN3-228ENST00000554592 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 PALLDQ8WX93 1383 aa6.8□□□□□ -1.32
ATXN3-228ENST00000554592 MAP3K19Q56UN5 1328 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 A0A0G2JLW4 131 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 A0A1W2PP55 124 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-228ENST00000554592 HTRA3P83110 453 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 ORC1Q13415 861 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 DSC3Q14574 896 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 AMIGO3Q86WK7 504 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 WNT8BQ93098 351 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 TP53INP1Q96A56 240 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 GOLGB1Q14789 3259 aaKnown RBP6.79□□□□□ -1.32
ATXN3-228ENST00000554592 ROCK2O75116 1388 aaKnown RBP6.79□□□□□ -1.32
ATXN3-228ENST00000554592 COL24A1Q17RW2 1714 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 KIAA1210Q9ULL0 1709 aa6.79□□□□□ -1.32
ATXN3-228ENST00000554592 BTAF1O14981 1849 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms