RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 ANKRD13CQ8N6S4 541 aa15.11■□□□□ 0.01
CHGA-203ENST00000553866 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
CHGA-203ENST00000553866 CABP5Q9NP86 173 aa15.11■□□□□ 0.01
CHGA-203ENST00000553866 ARPP21Q9UBL0 812 aaPredicted RBP15.11■□□□□ 0.01
CHGA-203ENST00000553866 SWAP70Q9UH65 585 aa15.11■□□□□ 0.01
CHGA-203ENST00000553866 PTCH2Q9Y6C5 1203 aa15.11■□□□□ 0.01
CHGA-203ENST00000553866 MGAMO43451 1857 aa15.11■□□□□ 0.01
CHGA-203ENST00000553866 A0A0D9SFI3 127 aa15.1■□□□□ 0.01
CHGA-203ENST00000553866 TRIM6-TRIM34B2RNG4 842 aa15.1■□□□□ 0.01
CHGA-203ENST00000553866 APPP05067 770 aa15.1■□□□□ 0.01
CHGA-203ENST00000553866 VPS53Q5VIR6 699 aa15.1■□□□□ 0.01
CHGA-203ENST00000553866 GIMAP6Q6P9H5 292 aa15.1■□□□□ 0.01
CHGA-203ENST00000553866 USP17L2Q6R6M4 530 aa15.1■□□□□ 0.01
CHGA-203ENST00000553866 DDRGK1Q96HY6 314 aa15.1■□□□□ 0.01
CHGA-203ENST00000553866 P2RX7Q99572 595 aaKnown RBP15.1■□□□□ 0.01
CHGA-203ENST00000553866 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.1■□□□□ 0.01
CHGA-203ENST00000553866 TMOD4Q9NZQ9 345 aa15.1■□□□□ 0.01
CHGA-203ENST00000553866 GNAT2P19087 354 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 OSBPP22059 807 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 HOXA7P31268 230 aaPredicted RBP15.09■□□□□ 0.01
CHGA-203ENST00000553866 TDO2P48775 406 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 SOX10P56693 466 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 NMIQ13287 307 aaPredicted RBP15.09■□□□□ 0.01
CHGA-203ENST00000553866 LRRFIP1Q32MZ4 808 aaKnown RBP15.09■□□□□ 0.01
CHGA-203ENST00000553866 TMEM179Q6ZVK1 233 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 SMCR8Q8TEV9 937 aaPredicted RBP15.09■□□□□ 0.01
CHGA-203ENST00000553866 C12orf42Q96LP6 360 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 FEZ1Q99689 392 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 KIAA1683Q9H0B3 1180 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 TACC3Q9Y6A5 838 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 ROBO3Q96MS0 1386 aa15.09■□□□□ 0.01
CHGA-203ENST00000553866 GREB1LQ9C091 1923 aaPredicted RBP15.08■□□□□ 0
CHGA-203ENST00000553866 PRDM1O75626 825 aa15.08■□□□□ 0
CHGA-203ENST00000553866 FMNL1O95466 1100 aaPredicted RBP15.08■□□□□ 0
CHGA-203ENST00000553866 RASA1P20936 1047 aa15.08■□□□□ 0
CHGA-203ENST00000553866 KIF22Q14807 665 aa15.08■□□□□ 0
CHGA-203ENST00000553866 ZNF589Q86UQ0 364 aaPredicted RBP15.08■□□□□ 0
CHGA-203ENST00000553866 AMOTL1Q8IY63 956 aa15.08■□□□□ 0
CHGA-203ENST00000553866 TXNRD2Q9NNW7 524 aa15.08■□□□□ 0
CHGA-203ENST00000553866 PNMA3Q9UL41 463 aa15.08■□□□□ 0
CHGA-203ENST00000553866 GABRQQ9UN88 632 aa15.08■□□□□ 0
CHGA-203ENST00000553866 GSPT1P15170 499 aaKnown RBP15.07■□□□□ 0
CHGA-203ENST00000553866 VCAM1P19320 739 aa15.07■□□□□ 0
CHGA-203ENST00000553866 SDSP20132 328 aa15.07■□□□□ 0
CHGA-203ENST00000553866 HERVK_113P62684 666 aa15.07■□□□□ 0
CHGA-203ENST00000553866 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 0
CHGA-203ENST00000553866 CCDC17Q96LX7 622 aa15.07■□□□□ 0
CHGA-203ENST00000553866 INCENPQ9NQS7 918 aa15.07■□□□□ 0
CHGA-203ENST00000553866 HELLSQ9NRZ9 838 aa15.07■□□□□ 0
CHGA-203ENST00000553866 DOCK3Q8IZD9 2030 aa15.06■□□□□ 0
CHGA-203ENST00000553866 TNRC18O15417 2968 aaPredicted RBP15.06■□□□□ 0
CHGA-203ENST00000553866 IRX3P78415 501 aaPredicted RBP15.06■□□□□ 0
CHGA-203ENST00000553866 ICA1Q05084 483 aa15.06■□□□□ 0
CHGA-203ENST00000553866 PRKCZQ05513 592 aa15.06■□□□□ 0
CHGA-203ENST00000553866 FAM110CQ1W6H9 321 aa15.06■□□□□ 0
CHGA-203ENST00000553866 Q3C1V9 767 aa15.06■□□□□ 0
CHGA-203ENST00000553866 MCMDC2Q4G0Z9 681 aa15.06■□□□□ 0
CHGA-203ENST00000553866 NAPBQ9H115 298 aa15.06■□□□□ 0
CHGA-203ENST00000553866 RPAP3Q9H6T3 665 aaPredicted RBP15.06■□□□□ 0
CHGA-203ENST00000553866 RBPJLQ9UBG7 517 aa15.06■□□□□ 0
CHGA-203ENST00000553866 SRRDQ9UH36 339 aa15.06■□□□□ 0
CHGA-203ENST00000553866 TAOK2Q9UL54 1235 aa15.06■□□□□ 0
CHGA-203ENST00000553866 CNMDO75829 334 aa15.05■□□□□ -0
CHGA-203ENST00000553866 EEF2P13639 858 aaKnown RBP15.05■□□□□ -0
CHGA-203ENST00000553866 USP14P54578 494 aa15.05■□□□□ -0
CHGA-203ENST00000553866 FCGRTP55899 365 aa15.05■□□□□ -0
CHGA-203ENST00000553866 CTDSPL2Q05D32 466 aa15.05■□□□□ -0
CHGA-203ENST00000553866 PPARAQ07869 468 aa15.05■□□□□ -0
CHGA-203ENST00000553866 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ -0
CHGA-203ENST00000553866 SH3TC2Q8TF17 1288 aa15.05■□□□□ -0
CHGA-203ENST00000553866 MORF4L1Q9UBU8 362 aa15.05■□□□□ -0
CHGA-203ENST00000553866 TMX2Q9Y320 296 aa15.05■□□□□ -0
CHGA-203ENST00000553866 RLFQ13129 1914 aa15.05■□□□□ -0
CHGA-203ENST00000553866 MYPNQ86TC9 1320 aa15.04■□□□□ -0
CHGA-203ENST00000553866 IGKV6D-41A0A0C4DH26 115 aa15.04■□□□□ -0
CHGA-203ENST00000553866 USP17L15C9J2P7 530 aa15.04■□□□□ -0
CHGA-203ENST00000553866 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
CHGA-203ENST00000553866 USP17L11C9JVI0 530 aa15.04■□□□□ -0
CHGA-203ENST00000553866 USP17L18D6R9N7 530 aa15.04■□□□□ -0
CHGA-203ENST00000553866 USP17L22D6RA61 530 aa15.04■□□□□ -0
CHGA-203ENST00000553866 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
CHGA-203ENST00000553866 USP17L19D6RCP7 530 aa15.04■□□□□ -0
CHGA-203ENST00000553866 USP17L20D6RJB6 530 aa15.04■□□□□ -0
CHGA-203ENST00000553866 GCLCP48506 637 aaPredicted RBP15.04■□□□□ -0
CHGA-203ENST00000553866 RGS19P49795 217 aa15.04■□□□□ -0
CHGA-203ENST00000553866 USP17L24Q0WX57 530 aa15.04■□□□□ -0
CHGA-203ENST00000553866 ARHGEF6Q15052 776 aa15.04■□□□□ -0
CHGA-203ENST00000553866 SKAP1Q86WV1 359 aa15.04■□□□□ -0
CHGA-203ENST00000553866 SPICE1Q8N0Z3 855 aa15.04■□□□□ -0
CHGA-203ENST00000553866 ARMC5Q96C12 935 aa15.04■□□□□ -0
CHGA-203ENST00000553866 NACAP1Q9BZK3 213 aa15.04■□□□□ -0
CHGA-203ENST00000553866 IL25Q9H293 177 aa15.04■□□□□ -0
CHGA-203ENST00000553866 MKNK2Q9HBH9 465 aa15.04■□□□□ -0
CHGA-203ENST00000553866 PLXNB2O15031 1838 aa15.03■□□□□ -0
CHGA-203ENST00000553866 POTEFA5A3E0 1075 aa15.03■□□□□ -0
CHGA-203ENST00000553866 MYCP01106 439 aaPredicted RBP15.03■□□□□ -0
CHGA-203ENST00000553866 GNRH1P01148 92 aa15.03■□□□□ -0
CHGA-203ENST00000553866 FGAP02671 866 aa15.03■□□□□ -0
CHGA-203ENST00000553866 HSPD1P10809 573 aaKnown RBP15.03■□□□□ -0
CHGA-203ENST00000553866 ATP2B2Q01814 1243 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms