RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 HPS5Q9UPZ3 1129 aa24.42■■□□□ 1.5
XRCC3-205ENST00000553807 PATL2C9JE40 543 aaKnown RBP24.41■■□□□ 1.5
XRCC3-205ENST00000553807 BCRP11274 1271 aa24.41■■□□□ 1.5
XRCC3-205ENST00000553807 OSBPP22059 807 aa24.41■■□□□ 1.5
XRCC3-205ENST00000553807 PDE4AP27815 886 aa24.41■■□□□ 1.5
XRCC3-205ENST00000553807 ARHGEF6Q15052 776 aa24.41■■□□□ 1.5
XRCC3-205ENST00000553807 TMEM179Q6ZVK1 233 aa24.41■■□□□ 1.5
XRCC3-205ENST00000553807 IFNL3Q8IZI9 196 aa24.41■■□□□ 1.5
XRCC3-205ENST00000553807 FAM227BQ96M60 508 aa24.41■■□□□ 1.5
XRCC3-205ENST00000553807 A0A0D9SFI3 127 aa24.4■■□□□ 1.5
XRCC3-205ENST00000553807 IRX3P78415 501 aaPredicted RBP24.4■■□□□ 1.5
XRCC3-205ENST00000553807 CLEC10AQ8IUN9 316 aa24.4■■□□□ 1.5
XRCC3-205ENST00000553807 NAPBQ9H115 298 aa24.4■■□□□ 1.5
XRCC3-205ENST00000553807 ASCC2Q9H1I8 757 aaPredicted RBP24.4■■□□□ 1.5
XRCC3-205ENST00000553807 EMILIN3Q9NT22 766 aa24.4■■□□□ 1.5
XRCC3-205ENST00000553807 ROBO3Q96MS0 1386 aa24.4■■□□□ 1.5
XRCC3-205ENST00000553807 NMIQ13287 307 aaPredicted RBP24.39■■□□□ 1.49
XRCC3-205ENST00000553807 HELLSQ9NRZ9 838 aa24.39■■□□□ 1.49
XRCC3-205ENST00000553807 USP14P54578 494 aa24.38■■□□□ 1.49
XRCC3-205ENST00000553807 ICA1Q05084 483 aa24.38■■□□□ 1.49
XRCC3-205ENST00000553807 ANKRD13CQ8N6S4 541 aa24.38■■□□□ 1.49
XRCC3-205ENST00000553807 CCDC17Q96LX7 622 aa24.38■■□□□ 1.49
XRCC3-205ENST00000553807 KIAA1683Q9H0B3 1180 aa24.38■■□□□ 1.49
XRCC3-205ENST00000553807 PTPN22Q9Y2R2 807 aa24.38■■□□□ 1.49
XRCC3-205ENST00000553807 CTGFP29279 349 aa24.37■■□□□ 1.49
XRCC3-205ENST00000553807 PSMC4P43686 418 aa24.37■■□□□ 1.49
XRCC3-205ENST00000553807 VPS53Q5VIR6 699 aa24.37■■□□□ 1.49
XRCC3-205ENST00000553807 C12orf42Q96LP6 360 aa24.37■■□□□ 1.49
XRCC3-205ENST00000553807 MKNK2Q9HBH9 465 aa24.37■■□□□ 1.49
XRCC3-205ENST00000553807 HTTP42858 3142 aa24.36■■□□□ 1.49
XRCC3-205ENST00000553807 FOXP2O15409 715 aa24.36■■□□□ 1.49
XRCC3-205ENST00000553807 FMNL1O95466 1100 aaPredicted RBP24.36■■□□□ 1.49
XRCC3-205ENST00000553807 MCMDC2Q4G0Z9 681 aa24.36■■□□□ 1.49
XRCC3-205ENST00000553807 TICAM2Q86XR7 235 aa24.36■■□□□ 1.49
XRCC3-205ENST00000553807 TRIM47Q96LD4 638 aa24.36■■□□□ 1.49
XRCC3-205ENST00000553807 A0A1W2PRG0 241 aa24.35■■□□□ 1.49
XRCC3-205ENST00000553807 PRDM1O75626 825 aa24.35■■□□□ 1.49
XRCC3-205ENST00000553807 VCAM1P19320 739 aa24.35■■□□□ 1.49
XRCC3-205ENST00000553807 SDSP20132 328 aa24.35■■□□□ 1.49
XRCC3-205ENST00000553807 HOXA7P31268 230 aaPredicted RBP24.35■■□□□ 1.49
XRCC3-205ENST00000553807 ATP2B2Q01814 1243 aa24.35■■□□□ 1.49
XRCC3-205ENST00000553807 ARHGEF10LQ9HCE6 1279 aa24.35■■□□□ 1.49
XRCC3-205ENST00000553807 DIAPH3Q9NSV4 1193 aa24.35■■□□□ 1.49
XRCC3-205ENST00000553807 RASA1P20936 1047 aa24.34■■□□□ 1.49
XRCC3-205ENST00000553807 GCLCP48506 637 aaPredicted RBP24.34■■□□□ 1.49
XRCC3-205ENST00000553807 FCGRTP55899 365 aa24.34■■□□□ 1.49
XRCC3-205ENST00000553807 PPARAQ07869 468 aa24.34■■□□□ 1.49
XRCC3-205ENST00000553807 FAM110CQ1W6H9 321 aa24.34■■□□□ 1.49
XRCC3-205ENST00000553807 ZNF589Q86UQ0 364 aaPredicted RBP24.34■■□□□ 1.49
XRCC3-205ENST00000553807 PTCH2Q9Y6C5 1203 aa24.34■■□□□ 1.49
XRCC3-205ENST00000553807 CCDC171Q6TFL3 1326 aa24.34■■□□□ 1.49
XRCC3-205ENST00000553807 HERVK_113P62684 666 aa24.33■■□□□ 1.49
XRCC3-205ENST00000553807 TTC22Q5TAA0 569 aa24.33■■□□□ 1.49
XRCC3-205ENST00000553807 P2RX7Q99572 595 aaKnown RBP24.33■■□□□ 1.49
XRCC3-205ENST00000553807 ZNF287Q9HBT7 754 aa24.33■■□□□ 1.49
XRCC3-205ENST00000553807 USP17L15C9J2P7 530 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 USP17L13C9JLJ4 530 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 USP17L11C9JVI0 530 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 USP17L18D6R9N7 530 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 USP17L22D6RA61 530 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 USP17L17D6RBQ6 530 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 USP17L19D6RCP7 530 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 USP17L20D6RJB6 530 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 GNRH1P01148 92 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 SLC3A2P08195 630 aaKnown RBP24.32■■□□□ 1.48
XRCC3-205ENST00000553807 GSPT1P15170 499 aaKnown RBP24.32■■□□□ 1.48
XRCC3-205ENST00000553807 USP17L24Q0WX57 530 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 RPAP3Q9H6T3 665 aaPredicted RBP24.32■■□□□ 1.48
XRCC3-205ENST00000553807 SH2D4AQ9H788 454 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 MGAMO43451 1857 aa24.32■■□□□ 1.48
XRCC3-205ENST00000553807 EEF2P13639 858 aaKnown RBP24.31■■□□□ 1.48
XRCC3-205ENST00000553807 SOX10P56693 466 aa24.31■■□□□ 1.48
XRCC3-205ENST00000553807 PDE4BQ07343 736 aa24.31■■□□□ 1.48
XRCC3-205ENST00000553807 CWC27Q6UX04 472 aaKnown RBP24.31■■□□□ 1.48
XRCC3-205ENST00000553807 SIAH1Q8IUQ4 282 aa24.31■■□□□ 1.48
XRCC3-205ENST00000553807 KANSL2Q9H9L4 492 aa24.31■■□□□ 1.48
XRCC3-205ENST00000553807 GREB1LQ9C091 1923 aaPredicted RBP24.31■■□□□ 1.48
XRCC3-205ENST00000553807 MYPNQ86TC9 1320 aa24.31■■□□□ 1.48
XRCC3-205ENST00000553807 HIP1O00291 1037 aa24.3■■□□□ 1.48
XRCC3-205ENST00000553807 TNPO2O14787 897 aaKnown RBP24.3■■□□□ 1.48
XRCC3-205ENST00000553807 PEX10O60683 326 aa24.3■■□□□ 1.48
XRCC3-205ENST00000553807 ZNF444Q8N0Y2 327 aaPredicted RBP24.3■■□□□ 1.48
XRCC3-205ENST00000553807 SPICE1Q8N0Z3 855 aa24.3■■□□□ 1.48
XRCC3-205ENST00000553807 PAGR1Q9BTK6 254 aa24.3■■□□□ 1.48
XRCC3-205ENST00000553807 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.3■■□□□ 1.48
XRCC3-205ENST00000553807 TANGO6Q9C0B7 1094 aa24.3■■□□□ 1.48
XRCC3-205ENST00000553807 SRRDQ9UH36 339 aa24.3■■□□□ 1.48
XRCC3-205ENST00000553807 HOXD10P28358 340 aa24.29■■□□□ 1.48
XRCC3-205ENST00000553807 PRMT2P55345 433 aa24.29■■□□□ 1.48
XRCC3-205ENST00000553807 CTDSPL2Q05D32 466 aa24.29■■□□□ 1.48
XRCC3-205ENST00000553807 SLC9C1Q4G0N8 1177 aa24.29■■□□□ 1.48
XRCC3-205ENST00000553807 TMX2Q9Y320 296 aa24.29■■□□□ 1.48
XRCC3-205ENST00000553807 RAD21O60216 631 aa24.28■■□□□ 1.48
XRCC3-205ENST00000553807 HSPD1P10809 573 aaKnown RBP24.28■■□□□ 1.48
XRCC3-205ENST00000553807 MFAP1P55081 439 aaKnown RBP24.28■■□□□ 1.48
XRCC3-205ENST00000553807 PRKCZQ05513 592 aa24.28■■□□□ 1.48
XRCC3-205ENST00000553807 KIAA1755Q5JYT7 1200 aa24.28■■□□□ 1.48
XRCC3-205ENST00000553807 CATSPERGQ6ZRH7 1159 aa24.28■■□□□ 1.48
XRCC3-205ENST00000553807 GTF3C2Q8WUA4 911 aaPredicted RBP24.28■■□□□ 1.48
XRCC3-205ENST00000553807 VCPKMTQ9H867 229 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms