RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 HERVK_113P62684 666 aa19.19■□□□□ 0.66
ACTN1-209ENST00000553659 TRIM32Q13049 653 aa19.19■□□□□ 0.66
ACTN1-209ENST00000553659 NUDT12Q9BQG2 462 aa19.19■□□□□ 0.66
ACTN1-209ENST00000553659 TXNRD2Q9NNW7 524 aa19.19■□□□□ 0.66
ACTN1-209ENST00000553659 PIH1D3Q9NQM4 214 aaKnown RBP19.19■□□□□ 0.66
ACTN1-209ENST00000553659 DDX60LQ5H9U9 1706 aaKnown RBP19.19■□□□□ 0.66
ACTN1-209ENST00000553659 SALL3Q9BXA9 1300 aa19.19■□□□□ 0.66
ACTN1-209ENST00000553659 SMARCA5O60264 1052 aaPredicted RBP19.18■□□□□ 0.66
ACTN1-209ENST00000553659 GDF11O95390 407 aa19.18■□□□□ 0.66
ACTN1-209ENST00000553659 HLA-DOAP06340 250 aa19.18■□□□□ 0.66
ACTN1-209ENST00000553659 XRCC5P13010 732 aaKnown RBP19.18■□□□□ 0.66
ACTN1-209ENST00000553659 CYP2B6P20813 491 aa19.18■□□□□ 0.66
ACTN1-209ENST00000553659 SHROOM1Q2M3G4 852 aaPredicted RBP19.18■□□□□ 0.66
ACTN1-209ENST00000553659 TRIB2Q92519 343 aa19.18■□□□□ 0.66
ACTN1-209ENST00000553659 RBPJLQ9UBG7 517 aa19.18■□□□□ 0.66
ACTN1-209ENST00000553659 SAP30BPQ9UHR5 308 aaKnown RBP19.18■□□□□ 0.66
ACTN1-209ENST00000553659 ZBTB21Q9ULJ3 1066 aa19.18■□□□□ 0.66
ACTN1-209ENST00000553659 APBB1O00213 710 aa19.17■□□□□ 0.66
ACTN1-209ENST00000553659 CYP7A1P22680 504 aa19.17■□□□□ 0.66
ACTN1-209ENST00000553659 DYNLL1P63167 89 aaKnown RBP19.17■□□□□ 0.66
ACTN1-209ENST00000553659 MAP3K21Q5TCX8 1036 aa19.17■□□□□ 0.66
ACTN1-209ENST00000553659 RHPN1Q8TCX5 695 aa19.17■□□□□ 0.66
ACTN1-209ENST00000553659 SOCS4Q8WXH5 440 aa19.17■□□□□ 0.66
ACTN1-209ENST00000553659 NBPF3Q9H094 633 aa19.17■□□□□ 0.66
ACTN1-209ENST00000553659 DBNLQ9UJU6 430 aaKnown RBP19.17■□□□□ 0.66
ACTN1-209ENST00000553659 PEX10O60683 326 aa19.16■□□□□ 0.66
ACTN1-209ENST00000553659 MAPK4P31152 587 aa19.16■□□□□ 0.66
ACTN1-209ENST00000553659 MNX1P50219 401 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-209ENST00000553659 Q3C1V9 767 aa19.16■□□□□ 0.66
ACTN1-209ENST00000553659 USP17L2Q6R6M4 530 aa19.16■□□□□ 0.66
ACTN1-209ENST00000553659 TRMT44Q8IYL2 757 aaKnown RBP19.16■□□□□ 0.66
ACTN1-209ENST00000553659 GTF3C2Q8WUA4 911 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-209ENST00000553659 CCDC8Q9H0W5 538 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-209ENST00000553659 EMILIN3Q9NT22 766 aa19.16■□□□□ 0.66
ACTN1-209ENST00000553659 OGDHLQ9ULD0 1010 aa19.16■□□□□ 0.66
ACTN1-209ENST00000553659 ERVK-9P63128 1117 aa19.15■□□□□ 0.66
ACTN1-209ENST00000553659 ERVK-24P63145 666 aa19.15■□□□□ 0.66
ACTN1-209ENST00000553659 CERS3Q8IU89 383 aa19.15■□□□□ 0.66
ACTN1-209ENST00000553659 EAF2Q96CJ1 260 aaPredicted RBP19.15■□□□□ 0.66
ACTN1-209ENST00000553659 TLR7Q9NYK1 1049 aaKnown RBP19.15■□□□□ 0.66
ACTN1-209ENST00000553659 IDH1O75874 414 aaKnown RBP19.14■□□□□ 0.65
ACTN1-209ENST00000553659 PRKAR2AP13861 404 aaKnown RBP19.14■□□□□ 0.65
ACTN1-209ENST00000553659 SDSP20132 328 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 BMP8BP34820 402 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 USP5P45974 858 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 TATDN1Q6P1N9 297 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 CCAR1Q8IX12 1150 aaKnown RBP19.14■□□□□ 0.65
ACTN1-209ENST00000553659 C7orf61Q8IZ16 206 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 USP6NLQ92738 828 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 GPATCH3Q96I76 525 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 GDF15Q99988 308 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 C11orf49Q9H6J7 331 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 SZT2Q5T011 3432 aa19.14■□□□□ 0.65
ACTN1-209ENST00000553659 REC8O95072 547 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 GH2P01242 217 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 TMED8Q6PL24 325 aaPredicted RBP19.13■□□□□ 0.65
ACTN1-209ENST00000553659 POTEEQ6S8J3 1075 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 GPR142Q7Z601 462 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 CLASRPQ8N2M8 674 aaKnown RBP19.13■□□□□ 0.65
ACTN1-209ENST00000553659 MAGEB6Q8N7X4 407 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 MIGA1Q8NAN2 632 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 OTUD7AQ8TE49 926 aaPredicted RBP19.13■□□□□ 0.65
ACTN1-209ENST00000553659 C12orf42Q96LP6 360 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 PORCNQ9H237 461 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 SERPINB13Q9UIV8 391 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 TTC41PQ6P2S7 1318 aa19.13■□□□□ 0.65
ACTN1-209ENST00000553659 RANBP2P49792 3224 aaKnown RBP19.13■□□□□ 0.65
ACTN1-209ENST00000553659 SOX1O00570 391 aaPredicted RBP19.12■□□□□ 0.65
ACTN1-209ENST00000553659 ZKSCAN1P17029 563 aaPredicted RBP19.12■□□□□ 0.65
ACTN1-209ENST00000553659 RGS2P41220 211 aa19.12■□□□□ 0.65
ACTN1-209ENST00000553659 CACNB2Q08289 660 aaPredicted RBP19.12■□□□□ 0.65
ACTN1-209ENST00000553659 MORN1Q5T089 497 aa19.12■□□□□ 0.65
ACTN1-209ENST00000553659 PLEKHH3Q7Z736 793 aa19.12■□□□□ 0.65
ACTN1-209ENST00000553659 PAGR1Q9BTK6 254 aa19.12■□□□□ 0.65
ACTN1-209ENST00000553659 EHD4Q9H223 541 aa19.12■□□□□ 0.65
ACTN1-209ENST00000553659 USP17L15C9J2P7 530 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 USP17L13C9JLJ4 530 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 USP17L11C9JVI0 530 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 USP17L18D6R9N7 530 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 USP17L22D6RA61 530 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 USP17L17D6RBQ6 530 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 USP17L19D6RCP7 530 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 USP17L20D6RJB6 530 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 ERC2O15083 957 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 EPB41L2O43491 1005 aaKnown RBP19.11■□□□□ 0.65
ACTN1-209ENST00000553659 USP17L24Q0WX57 530 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 MAP3K12Q12852 859 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 TTC6Q86TZ1 520 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 ANTXR1Q9H6X2 564 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 ZMYND8Q9ULU4 1186 aaPredicted RBP19.11■□□□□ 0.65
ACTN1-209ENST00000553659 RABGAP1Q9Y3P9 1069 aa19.11■□□□□ 0.65
ACTN1-209ENST00000553659 FRMPD3Q5JV73 1810 aa19.1■□□□□ 0.65
ACTN1-209ENST00000553659 USP14P54578 494 aa19.1■□□□□ 0.65
ACTN1-209ENST00000553659 CCL14Q16627 93 aa19.1■□□□□ 0.65
ACTN1-209ENST00000553659 CERKLQ49MI3 558 aaPredicted RBP19.1■□□□□ 0.65
ACTN1-209ENST00000553659 IL27Q8NEV9 243 aa19.1■□□□□ 0.65
ACTN1-209ENST00000553659 LRCH3Q96II8 777 aa19.1■□□□□ 0.65
ACTN1-209ENST00000553659 FEZ1Q99689 392 aa19.1■□□□□ 0.65
ACTN1-209ENST00000553659 APBA2Q99767 749 aa19.1■□□□□ 0.65
ACTN1-209ENST00000553659 NDUFB9Q9Y6M9 179 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms