RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 RNF113AO15541 343 aaKnown RBP13.96□□□□□ -0.17
CCNK-202ENST00000553636 GLRX3O76003 335 aaKnown RBP13.96□□□□□ -0.17
CCNK-202ENST00000553636 GUCY1A2P33402 732 aa13.96□□□□□ -0.17
CCNK-202ENST00000553636 SEPT2Q15019 361 aa13.96□□□□□ -0.17
CCNK-202ENST00000553636 ACER1Q8TDN7 264 aa13.96□□□□□ -0.17
CCNK-202ENST00000553636 APPBP2Q92624 585 aa13.96□□□□□ -0.17
CCNK-202ENST00000553636 TMEM106CQ9BVX2 250 aa13.96□□□□□ -0.17
CCNK-202ENST00000553636 EMILIN3Q9NT22 766 aa13.96□□□□□ -0.17
CCNK-202ENST00000553636 SWAP70Q9UH65 585 aa13.96□□□□□ -0.17
CCNK-202ENST00000553636 HOXA7P31268 230 aaPredicted RBP13.95□□□□□ -0.18
CCNK-202ENST00000553636 GRK4P32298 578 aa13.95□□□□□ -0.18
CCNK-202ENST00000553636 HERVK_113P62684 666 aa13.95□□□□□ -0.18
CCNK-202ENST00000553636 HDAC1Q13547 482 aaPredicted RBP13.95□□□□□ -0.18
CCNK-202ENST00000553636 C12orf60Q5U649 245 aa13.95□□□□□ -0.18
CCNK-202ENST00000553636 OSBP2Q969R2 916 aa13.95□□□□□ -0.18
CCNK-202ENST00000553636 GCC1Q96CN9 775 aa13.95□□□□□ -0.18
CCNK-202ENST00000553636 P2RX7Q99572 595 aaKnown RBP13.95□□□□□ -0.18
CCNK-202ENST00000553636 FSD1Q9BTV5 496 aa13.95□□□□□ -0.18
CCNK-202ENST00000553636 KIAA1683Q9H0B3 1180 aa13.95□□□□□ -0.18
CCNK-202ENST00000553636 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
CCNK-202ENST00000553636 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 TNRC18O15417 2968 aaPredicted RBP13.94□□□□□ -0.18
CCNK-202ENST00000553636 M0R2C6 588 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 GPAA1O43292 621 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 PEX10O60683 326 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 ZFYP08048 801 aaPredicted RBP13.94□□□□□ -0.18
CCNK-202ENST00000553636 AKR1B1P15121 316 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 EN2P19622 333 aaPredicted RBP13.94□□□□□ -0.18
CCNK-202ENST00000553636 FLT3LGP49771 235 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 USP14P54578 494 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 CLEC10AQ8IUN9 316 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 EXOC6Q8TAG9 804 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 COA7Q96BR5 231 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 C12orf42Q96LP6 360 aa13.94□□□□□ -0.18
CCNK-202ENST00000553636 STRBPQ96SI9 672 aaKnown RBP13.94□□□□□ -0.18
CCNK-202ENST00000553636 BIN2Q9UBW5 565 aaPredicted RBP13.94□□□□□ -0.18
CCNK-202ENST00000553636 KIAA0100Q14667 2235 aaKnown RBP13.94□□□□□ -0.18
CCNK-202ENST00000553636 DOCK3Q8IZD9 2030 aa13.93□□□□□ -0.18
CCNK-202ENST00000553636 VCAM1P19320 739 aa13.93□□□□□ -0.18
CCNK-202ENST00000553636 CDK8P49336 464 aa13.93□□□□□ -0.18
CCNK-202ENST00000553636 MTFR1Q15390 333 aa13.93□□□□□ -0.18
CCNK-202ENST00000553636 LRRFIP1Q32MZ4 808 aaKnown RBP13.93□□□□□ -0.18
CCNK-202ENST00000553636 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
CCNK-202ENST00000553636 TMEM179Q6ZVK1 233 aa13.93□□□□□ -0.18
CCNK-202ENST00000553636 PAGR1Q9BTK6 254 aa13.93□□□□□ -0.18
CCNK-202ENST00000553636 TXNRD2Q9NNW7 524 aa13.93□□□□□ -0.18
CCNK-202ENST00000553636 ARPP21Q9UBL0 812 aaPredicted RBP13.93□□□□□ -0.18
CCNK-202ENST00000553636 MORF4L1Q9UBU8 362 aa13.93□□□□□ -0.18
CCNK-202ENST00000553636 A0A1W2PRG0 241 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 GSG1L2A8MUP6 293 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 USP17L15C9J2P7 530 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 USP17L13C9JLJ4 530 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 USP17L11C9JVI0 530 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 USP17L18D6R9N7 530 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 USP17L22D6RA61 530 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 USP17L17D6RBQ6 530 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 USP17L19D6RCP7 530 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 USP17L20D6RJB6 530 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 ADCY3O60266 1144 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 ELNP15502 786 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 USP17L24Q0WX57 530 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 AAMPQ13685 434 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 C16orf86Q6ZW13 317 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 STK11IPQ8N1F8 1099 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 SLAIN1Q8ND83 568 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 SEC62Q99442 399 aaKnown RBP13.92□□□□□ -0.18
CCNK-202ENST00000553636 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 RPAP3Q9H6T3 665 aaPredicted RBP13.92□□□□□ -0.18
CCNK-202ENST00000553636 PLXNB2O15031 1838 aa13.92□□□□□ -0.18
CCNK-202ENST00000553636 MINDY4BA8MYZ0 360 aa13.91□□□□□ -0.18
CCNK-202ENST00000553636 APPP05067 770 aa13.91□□□□□ -0.18
CCNK-202ENST00000553636 TDO2P48775 406 aa13.91□□□□□ -0.18
CCNK-202ENST00000553636 PDE1AP54750 535 aa13.91□□□□□ -0.18
CCNK-202ENST00000553636 ICA1Q05084 483 aa13.91□□□□□ -0.18
CCNK-202ENST00000553636 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
CCNK-202ENST00000553636 GPRC5AQ8NFJ5 357 aa13.91□□□□□ -0.18
CCNK-202ENST00000553636 CCDC17Q96LX7 622 aa13.91□□□□□ -0.18
CCNK-202ENST00000553636 EPB41L4AQ9HCS5 686 aaPredicted RBP13.91□□□□□ -0.18
CCNK-202ENST00000553636 SUPT16HQ9Y5B9 1047 aaKnown RBP13.91□□□□□ -0.18
CCNK-202ENST00000553636 GREB1LQ9C091 1923 aaPredicted RBP13.9□□□□□ -0.18
CCNK-202ENST00000553636 PDE4DIPQ5VU43 2346 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 INHAP05111 366 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 CCL5P13501 91 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 ERVK-9P63128 1117 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 ERVK-24P63145 666 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 UBXN2AP68543 259 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 ATP2B2Q01814 1243 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 IRF5Q13568 498 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 SBK1Q52WX2 424 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 ZMYM1Q5SVZ6 1142 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 GIMAP6Q6P9H5 292 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 POTEEQ6S8J3 1075 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 CATSPERGQ6ZRH7 1159 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 CCAR1Q8IX12 1150 aaKnown RBP13.9□□□□□ -0.18
CCNK-202ENST00000553636 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
CCNK-202ENST00000553636 TANGO6Q9C0B7 1094 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 RWDD1Q9H446 243 aaPredicted RBP13.9□□□□□ -0.18
CCNK-202ENST00000553636 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 RBPJLQ9UBG7 517 aa13.9□□□□□ -0.18
CCNK-202ENST00000553636 CENPFP49454 3210 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms