RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 GPRASP2Q96D09 838 aa5.43□□□□□ -1.54
USP44-208ENST00000552440 ATXN3LQ9H3M9 355 aa5.43□□□□□ -1.54
USP44-208ENST00000552440 LRRC4CQ9HCJ2 640 aa5.43□□□□□ -1.54
USP44-208ENST00000552440 NPHS2Q9NP85 383 aa5.43□□□□□ -1.54
USP44-208ENST00000552440 FAM170BA6NMN3 283 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 METTL12A8MUP2 240 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 AOC2O75106 756 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 POLR3DP05423 398 aaPredicted RBP5.42□□□□□ -1.54
USP44-208ENST00000552440 SPRED3Q2MJR0 410 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 FERMT3Q86UX7 667 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 AMOTL1Q8IY63 956 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 RASGRP4Q8TDF6 673 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 IL17RAQ96F46 866 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 BCO2Q9BYV7 579 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 ZNF576Q9H609 170 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 PIDD1Q9HB75 910 aa5.42□□□□□ -1.54
USP44-208ENST00000552440 THRAP3Q9Y2W1 955 aaKnown RBP5.42□□□□□ -1.54
USP44-208ENST00000552440 CCER2I3L3R5 266 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 LIG1P18858 919 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 PPP2R3AQ06190 1150 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 SAFB2Q14151 953 aaKnown RBP eCLIP5.41□□□□□ -1.54
USP44-208ENST00000552440 PRPF40BQ6NWY9 871 aaKnown RBP5.41□□□□□ -1.54
USP44-208ENST00000552440 CEP89Q96ST8 783 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 KRT82Q9NSB4 513 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 ZC3H7BQ9UGR2 993 aaKnown RBP5.41□□□□□ -1.54
USP44-208ENST00000552440 SWAP70Q9UH65 585 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 FBXO9Q9UK97 447 aaPredicted RBP5.41□□□□□ -1.54
USP44-208ENST00000552440 EID1Q9Y6B2 187 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 CDC45O75419 566 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 GNALP38405 381 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 DHX8Q14562 1220 aaKnown RBP5.41□□□□□ -1.54
USP44-208ENST00000552440 ZNF765Q7L2R6 523 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 SRPK1Q96SB4 655 aaKnown RBP5.41□□□□□ -1.54
USP44-208ENST00000552440 MKNK2Q9HBH9 465 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 JADE2Q9NQC1 790 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 PAK6Q9NQU5 681 aaPredicted RBP5.41□□□□□ -1.54
USP44-208ENST00000552440 FAM105AQ9NUU6 356 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 KBTBD4Q9NVX7 518 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 DAGLAQ9Y4D2 1042 aa5.41□□□□□ -1.54
USP44-208ENST00000552440 GRM2Q14416 872 aa5.4□□□□□ -1.54
USP44-208ENST00000552440 SEZ6L2Q6UXD5 910 aa5.4□□□□□ -1.54
USP44-208ENST00000552440 TRIM56Q9BRZ2 755 aaKnown RBP5.4□□□□□ -1.54
USP44-208ENST00000552440 NOC4LQ9BVI4 516 aaKnown RBP5.4□□□□□ -1.54
USP44-208ENST00000552440 SFMBT1Q9UHJ3 866 aa5.4□□□□□ -1.54
USP44-208ENST00000552440 KIF3BO15066 747 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 PLIN1O60240 522 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 LDHAP00338 332 aaKnown RBP5.39□□□□□ -1.55
USP44-208ENST00000552440 ARSHQ5FYA8 562 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 OGFOD2Q6N063 350 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 NETO1Q8TDF5 533 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 BCL7CQ8WUZ0 217 aaPredicted RBP5.39□□□□□ -1.55
USP44-208ENST00000552440 SLC39A13Q96H72 371 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 C1GALT1Q9NS00 363 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 FANCLQ9NW38 375 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 VAV3Q9UKW4 847 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 TMEM238LA0A1B0GVL6 79 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 GADD45BO75293 160 aaPredicted RBP5.39□□□□□ -1.55
USP44-208ENST00000552440 CHMP4BP1P59074 171 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 ID3Q02535 119 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 PLCL1Q15111 1095 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 ARHGAP27Q6ZUM4 889 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 C3orf58Q8NDZ4 430 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 TSR2Q969E8 191 aaKnown RBP5.39□□□□□ -1.55
USP44-208ENST00000552440 SEC16BQ96JE7 1060 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 ZNF512BQ96KM6 892 aaPredicted RBP5.39□□□□□ -1.55
USP44-208ENST00000552440 MPHOSPH6Q99547 160 aaKnown RBP5.39□□□□□ -1.55
USP44-208ENST00000552440 APBA2Q99767 749 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 SPON2Q9BUD6 331 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 RSRP1Q9BUV0 290 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 WDR18Q9BV38 432 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 HOMER2Q9NSB8 354 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 SIRPGQ9P1W8 387 aa5.39□□□□□ -1.55
USP44-208ENST00000552440 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
USP44-208ENST00000552440 GSTT1P30711 240 aa5.38□□□□□ -1.55
USP44-208ENST00000552440 LMOD3Q0VAK6 560 aa5.38□□□□□ -1.55
USP44-208ENST00000552440 HDAC1Q13547 482 aaPredicted RBP5.38□□□□□ -1.55
USP44-208ENST00000552440 PCGF5Q86SE9 256 aa5.38□□□□□ -1.55
USP44-208ENST00000552440 ATG4DQ86TL0 474 aaPredicted RBP5.38□□□□□ -1.55
USP44-208ENST00000552440 KIAA0825Q8IV33 1275 aa5.38□□□□□ -1.55
USP44-208ENST00000552440 WDR75Q8IWA0 830 aaKnown RBP5.38□□□□□ -1.55
USP44-208ENST00000552440 GLIS3Q8NEA6 775 aa5.38□□□□□ -1.55
USP44-208ENST00000552440 NAP1L4Q99733 375 aaKnown RBP5.38□□□□□ -1.55
USP44-208ENST00000552440 TMX4Q9H1E5 349 aaPredicted RBP5.38□□□□□ -1.55
USP44-208ENST00000552440 CRIM1Q9NZV1 1036 aa5.38□□□□□ -1.55
USP44-208ENST00000552440 ADAMTS1Q9UHI8 967 aa5.38□□□□□ -1.55
USP44-208ENST00000552440 PCOLCE2Q9UKZ9 415 aa5.38□□□□□ -1.55
USP44-208ENST00000552440 CAND2O75155 1236 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 MYBPC2Q14324 1141 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 KIAA0907Q7Z7F0 614 aaPredicted RBP5.37□□□□□ -1.55
USP44-208ENST00000552440 RAVER1Q8IY67 606 aaKnown RBP5.37□□□□□ -1.55
USP44-208ENST00000552440 SMYD4Q8IYR2 804 aaPredicted RBP5.37□□□□□ -1.55
USP44-208ENST00000552440 SHISA5Q8N114 240 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 SAMD3Q8N6K7 520 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 EMILIN2Q9BXX0 1053 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 SNTG2Q9NY99 539 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 TMEM265A0A087WTH1 108 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 IFRD1O00458 451 aaPredicted RBP5.37□□□□□ -1.55
USP44-208ENST00000552440 ZNF500O60304 480 aaPredicted RBP5.37□□□□□ -1.55
USP44-208ENST00000552440 HSP90AA1P07900 732 aaKnown RBP5.37□□□□□ -1.55
USP44-208ENST00000552440 CD53P19397 219 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms