RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 NPY5RQ15761 445 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 MEX3CQ5U5Q3 659 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 DDX46Q7L014 1031 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 TACC3Q9Y6A5 838 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 NDUFB9Q9Y6M9 179 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 WDHD1O75717 1129 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 CAVIN2O95810 425 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 RECKO95980 971 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 HIBADHP31937 336 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 ADD1P35611 737 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 TNNT2P45379 298 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 HMGN5P82970 282 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 RDM1Q8NG50 284 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 RANBP17Q9H2T7 1088 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 LY9Q9HBG7 655 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 ZNF287Q9HBT7 754 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 HMX1Q9NP08 348 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 TRMT112Q9UI30 125 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 TMX2Q9Y320 296 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 PTPRDP23468 1912 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 TNKSO95271 1327 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 ALPK3Q96L96 1907 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 FMNL1O95466 1100 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 IARSP41252 1262 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 PRELPP51888 382 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 TNIP1Q15025 636 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 RNF20Q5VTR2 975 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 DHX32Q7L7V1 743 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 NPAS4Q8IUM7 802 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 PRR7Q8TB68 274 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 SPIRE2Q8WWL2 714 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 CELF1Q92879 486 aaKnown RBP5.79□□□□□ -1.48
SCAF11-212ENST00000549162 MORF4L1Q9UBU8 362 aa5.79□□□□□ -1.48
SCAF11-212ENST00000549162 C2orf72A6NCS6 295 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 PPP6R2O75170 966 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 EZH2Q15910 746 aaKnown RBP5.78□□□□□ -1.48
SCAF11-212ENST00000549162 RTL5Q5HYW3 569 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-212ENST00000549162 CREB3L3Q68CJ9 461 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 TTLL6Q8N841 843 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 CCDC136Q96JN2 1154 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 FOXP1Q9H334 677 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-212ENST00000549162 YDJCA8MPS7 323 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 M0R2C6 588 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 BMP15O95972 392 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 C7P10643 843 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 NCLP19338 710 aaKnown RBP5.78□□□□□ -1.48
SCAF11-212ENST00000549162 SERPINB4P48594 390 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 WASHC4Q2M389 1173 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 B4GALNT3Q6L9W6 998 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 LPAR1Q92633 364 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 PYM1Q9BRP8 204 aaKnown RBP5.78□□□□□ -1.48
SCAF11-212ENST00000549162 ZSCAN16Q9H4T2 348 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-212ENST00000549162 DIAPH3Q9NSV4 1193 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 ZNF106Q9H2Y7 1883 aaKnown RBP5.78□□□□□ -1.48
SCAF11-212ENST00000549162 USP17L3A6NCW0 530 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 USP17L4A6NCW7 530 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 INPPL1O15357 1258 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 TRIM37O94972 964 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 MAPTP10636 758 aaKnown RBP5.78□□□□□ -1.48
SCAF11-212ENST00000549162 EDNRBP24530 442 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 ICAM3P32942 547 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 SNRPFP62306 86 aaKnown RBP5.78□□□□□ -1.48
SCAF11-212ENST00000549162 MAP3K12Q12852 859 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 USP17L1Q7RTZ2 530 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 KIAA1683Q9H0B3 1180 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 MIS18AQ9NYP9 233 aa5.78□□□□□ -1.48
SCAF11-212ENST00000549162 HELZP42694 1942 aaKnown RBP5.77□□□□□ -1.48
SCAF11-212ENST00000549162 NFASCO94856 1347 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 UBE4BO95155 1302 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 FLT1P17948 1338 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 PHLPP2Q6ZVD8 1323 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 GUCY1A2P33402 732 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 ABCD1P33897 745 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 ASPRV1Q53RT3 343 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 DPY19L2Q6NUT2 758 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 PRPF40BQ6NWY9 871 aaKnown RBP5.77□□□□□ -1.49
SCAF11-212ENST00000549162 BRAPQ7Z569 592 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 OSBP2Q969R2 916 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 IPO9Q96P70 1041 aaKnown RBP5.77□□□□□ -1.49
SCAF11-212ENST00000549162 DBNDD2Q9BQY9 259 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 PIM2Q9P1W9 311 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 HPSEQ9Y251 543 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 Q9Y3F1 56 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 PSDA5PKW4 1024 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-212ENST00000549162 ANKRD33BA6NCL7 494 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 ADRB2P07550 413 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 HSD17B4P51659 736 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 FSTL1Q12841 308 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 ARL6IP4Q66PJ3 421 aaKnown RBP5.77□□□□□ -1.49
SCAF11-212ENST00000549162 CTR9Q6PD62 1173 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 RPAINQ86UA6 219 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 MICALL2Q8IY33 904 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 TIPINQ9BVW5 301 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 TMEM106CQ9BVX2 250 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 ST6GALNAC4Q9H4F1 302 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 DCP1AQ9NPI6 582 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-212ENST00000549162 CNTNAP5Q8WYK1 1306 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 SCN10AQ9Y5Y9 1956 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 H0YIN7 160 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 K7ELQ4 463 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms