RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 FMNL1O95466 1100 aaPredicted RBP18.88■□□□□ 0.61
DDX54-205ENST00000548786 BCRP11274 1271 aa18.88■□□□□ 0.61
DDX54-205ENST00000548786 OSBPP22059 807 aa18.88■□□□□ 0.61
DDX54-205ENST00000548786 PSMC4P43686 418 aa18.88■□□□□ 0.61
DDX54-205ENST00000548786 SOX10P56693 466 aa18.88■□□□□ 0.61
DDX54-205ENST00000548786 IRX3P78415 501 aaPredicted RBP18.88■□□□□ 0.61
DDX54-205ENST00000548786 PABPC4Q13310 644 aaKnown RBP eCLIP18.88■□□□□ 0.61
DDX54-205ENST00000548786 USP17L2Q6R6M4 530 aa18.88■□□□□ 0.61
DDX54-205ENST00000548786 C16orf86Q6ZW13 317 aa18.88■□□□□ 0.61
DDX54-205ENST00000548786 TRIM47Q96LD4 638 aa18.88■□□□□ 0.61
DDX54-205ENST00000548786 PTPN22Q9Y2R2 807 aa18.88■□□□□ 0.61
DDX54-205ENST00000548786 A0A0D9SFI3 127 aa18.87■□□□□ 0.61
DDX54-205ENST00000548786 PATL2C9JE40 543 aaKnown RBP18.87■□□□□ 0.61
DDX54-205ENST00000548786 PEX10O60683 326 aa18.87■□□□□ 0.61
DDX54-205ENST00000548786 PDE4AP27815 886 aa18.87■□□□□ 0.61
DDX54-205ENST00000548786 IFNL3Q8IZI9 196 aa18.87■□□□□ 0.61
DDX54-205ENST00000548786 PTCH2Q9Y6C5 1203 aa18.87■□□□□ 0.61
DDX54-205ENST00000548786 ATP2B2Q01814 1243 aa18.86■□□□□ 0.61
DDX54-205ENST00000548786 NMIQ13287 307 aaPredicted RBP18.86■□□□□ 0.61
DDX54-205ENST00000548786 ARHGEF6Q15052 776 aa18.86■□□□□ 0.61
DDX54-205ENST00000548786 VPS53Q5VIR6 699 aa18.86■□□□□ 0.61
DDX54-205ENST00000548786 GIMAP6Q6P9H5 292 aa18.86■□□□□ 0.61
DDX54-205ENST00000548786 TMEM179Q6ZVK1 233 aa18.86■□□□□ 0.61
DDX54-205ENST00000548786 NACAP1Q9BZK3 213 aa18.86■□□□□ 0.61
DDX54-205ENST00000548786 NAPBQ9H115 298 aa18.86■□□□□ 0.61
DDX54-205ENST00000548786 A0A1W2PRG0 241 aa18.85■□□□□ 0.61
DDX54-205ENST00000548786 PRDM1O75626 825 aa18.85■□□□□ 0.61
DDX54-205ENST00000548786 MYCP01106 439 aaPredicted RBP18.85■□□□□ 0.61
DDX54-205ENST00000548786 ICA1Q05084 483 aa18.85■□□□□ 0.61
DDX54-205ENST00000548786 SBK1Q52WX2 424 aa18.85■□□□□ 0.61
DDX54-205ENST00000548786 P2RX7Q99572 595 aaKnown RBP18.85■□□□□ 0.61
DDX54-205ENST00000548786 KIAA1683Q9H0B3 1180 aa18.85■□□□□ 0.61
DDX54-205ENST00000548786 MKNK2Q9HBH9 465 aa18.85■□□□□ 0.61
DDX54-205ENST00000548786 CENPFP49454 3210 aa18.85■□□□□ 0.61
DDX54-205ENST00000548786 FOXP2O15409 715 aa18.84■□□□□ 0.61
DDX54-205ENST00000548786 VCAM1P19320 739 aa18.84■□□□□ 0.61
DDX54-205ENST00000548786 FCGRTP55899 365 aa18.84■□□□□ 0.61
DDX54-205ENST00000548786 OSBPL3Q9H4L5 887 aa18.84■□□□□ 0.61
DDX54-205ENST00000548786 RAD21O60216 631 aa18.83■□□□□ 0.6
DDX54-205ENST00000548786 RASA1P20936 1047 aa18.83■□□□□ 0.6
DDX54-205ENST00000548786 USP14P54578 494 aa18.83■□□□□ 0.6
DDX54-205ENST00000548786 HERVK_113P62684 666 aa18.83■□□□□ 0.6
DDX54-205ENST00000548786 ZNF589Q86UQ0 364 aaPredicted RBP18.83■□□□□ 0.6
DDX54-205ENST00000548786 SPICE1Q8N0Z3 855 aa18.83■□□□□ 0.6
DDX54-205ENST00000548786 CCDC17Q96LX7 622 aa18.83■□□□□ 0.6
DDX54-205ENST00000548786 PAGR1Q9BTK6 254 aa18.83■□□□□ 0.6
DDX54-205ENST00000548786 RPAP3Q9H6T3 665 aaPredicted RBP18.83■□□□□ 0.6
DDX54-205ENST00000548786 HELLSQ9NRZ9 838 aa18.83■□□□□ 0.6
DDX54-205ENST00000548786 ROBO3Q96MS0 1386 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 MGAMO43451 1857 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 MYPNQ86TC9 1320 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 SDSP20132 328 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 HOXA7P31268 230 aaPredicted RBP18.82■□□□□ 0.6
DDX54-205ENST00000548786 GCLCP48506 637 aaPredicted RBP18.82■□□□□ 0.6
DDX54-205ENST00000548786 PRKCZQ05513 592 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 PPARAQ07869 468 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 SLC9C1Q4G0N8 1177 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 MCMDC2Q4G0Z9 681 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 KIAA1755Q5JYT7 1200 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 SH3TC2Q8TF17 1288 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 C12orf42Q96LP6 360 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 ARHGEF10LQ9HCE6 1279 aa18.82■□□□□ 0.6
DDX54-205ENST00000548786 TNPO2O14787 897 aaKnown RBP18.81■□□□□ 0.6
DDX54-205ENST00000548786 EEF2P13639 858 aaKnown RBP18.81■□□□□ 0.6
DDX54-205ENST00000548786 CTDSPL2Q05D32 466 aa18.81■□□□□ 0.6
DDX54-205ENST00000548786 FAM110CQ1W6H9 321 aa18.81■□□□□ 0.6
DDX54-205ENST00000548786 SAMD1Q6SPF0 538 aaPredicted RBP18.81■□□□□ 0.6
DDX54-205ENST00000548786 SIAH1Q8IUQ4 282 aa18.81■□□□□ 0.6
DDX54-205ENST00000548786 TANGO6Q9C0B7 1094 aa18.81■□□□□ 0.6
DDX54-205ENST00000548786 TXNRD2Q9NNW7 524 aa18.81■□□□□ 0.6
DDX54-205ENST00000548786 DIAPH3Q9NSV4 1193 aa18.81■□□□□ 0.6
DDX54-205ENST00000548786 SRRDQ9UH36 339 aa18.81■□□□□ 0.6
DDX54-205ENST00000548786 TAOK2Q9UL54 1235 aa18.81■□□□□ 0.6
DDX54-205ENST00000548786 GABRQQ9UN88 632 aa18.81■□□□□ 0.6
DDX54-205ENST00000548786 USP17L15C9J2P7 530 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 USP17L13C9JLJ4 530 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 USP17L11C9JVI0 530 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 USP17L18D6R9N7 530 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 USP17L22D6RA61 530 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 USP17L17D6RBQ6 530 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 USP17L19D6RCP7 530 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 USP17L20D6RJB6 530 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 USP17L24Q0WX57 530 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 CWC27Q6UX04 472 aaKnown RBP18.8■□□□□ 0.6
DDX54-205ENST00000548786 RAET1EQ8TD07 263 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.8■□□□□ 0.6
DDX54-205ENST00000548786 INCENPQ9NQS7 918 aa18.8■□□□□ 0.6
DDX54-205ENST00000548786 CCDC171Q6TFL3 1326 aa18.79■□□□□ 0.6
DDX54-205ENST00000548786 GNRH1P01148 92 aa18.79■□□□□ 0.6
DDX54-205ENST00000548786 GSPT1P15170 499 aaKnown RBP18.79■□□□□ 0.6
DDX54-205ENST00000548786 HOXD10P28358 340 aa18.79■□□□□ 0.6
DDX54-205ENST00000548786 FAM47AQ5JRC9 791 aa18.79■□□□□ 0.6
DDX54-205ENST00000548786 CATSPERGQ6ZRH7 1159 aa18.79■□□□□ 0.6
DDX54-205ENST00000548786 ZNF444Q8N0Y2 327 aaPredicted RBP18.79■□□□□ 0.6
DDX54-205ENST00000548786 KANSL2Q9H9L4 492 aa18.79■□□□□ 0.6
DDX54-205ENST00000548786 SLC3A2P08195 630 aaKnown RBP18.78■□□□□ 0.6
DDX54-205ENST00000548786 TTC22Q5TAA0 569 aa18.78■□□□□ 0.6
DDX54-205ENST00000548786 POTEEQ6S8J3 1075 aa18.78■□□□□ 0.6
DDX54-205ENST00000548786 SH2D4AQ9H788 454 aa18.78■□□□□ 0.6
DDX54-205ENST00000548786 RBPJLQ9UBG7 517 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms