RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 PBX2P40425 430 aa12.13□□□□□ -0.47
R3HDM2-210ENST00000547019 BACE1P56817 501 aa12.13□□□□□ -0.47
R3HDM2-210ENST00000547019 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
R3HDM2-210ENST00000547019 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
R3HDM2-210ENST00000547019 DDX19BQ9UMR2 479 aa12.13□□□□□ -0.47
R3HDM2-210ENST00000547019 MUC6Q6W4X9 2439 aa12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 ZNFX1Q9P2E3 1918 aaKnown RBP12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 ADORA1P30542 326 aa12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 FERMT2Q96AC1 680 aa12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 TIFAQ96CG3 184 aa12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 EDC3Q96F86 508 aaKnown RBP12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 WDR18Q9BV38 432 aa12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 PIEZO1Q92508 2521 aa12.12□□□□□ -0.47
R3HDM2-210ENST00000547019 PARP14Q460N5 1801 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 GRXCR1A8MXD5 290 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 EYA2O00167 538 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 MSCO60682 206 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 ADCYAP1R1P41586 468 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 MRPS5P82675 430 aaKnown RBP12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 TLE2Q04725 743 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 CCDC85BQ15834 202 aaPredicted RBP12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 AKNAD1Q5T1N1 836 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 C20orf194Q5TEA3 1177 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 MFSD14CQ5VZR4 134 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 DZIP1Q86YF9 867 aaKnown RBP12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 LRFN3Q9BTN0 628 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
R3HDM2-210ENST00000547019 GPR75-ASB3A0A0A6YYF3 556 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 SRGAP3O43295 1099 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 HOXC6P09630 235 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 MECOMQ03112 1051 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 TFF2Q03403 129 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 MTX1Q13505 466 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 GRB14Q14449 540 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 ATP2B3Q16720 1220 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 FAM47AQ5JRC9 791 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 PBX4Q9BYU1 374 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 SIL1Q9H173 461 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 EPHX3Q9H6B9 360 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 AS3MTQ9HBK9 375 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 C11orf16Q9NQ32 467 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 DENND2AQ9ULE3 1009 aa12.1□□□□□ -0.47
R3HDM2-210ENST00000547019 SLC15A5A6NIM6 579 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 KBTBD13C9JR72 458 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 GDF11O95390 407 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 BMP1P13497 986 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 PTPREP23469 700 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 LRRC41Q15345 812 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 C1orf53Q5VUE5 145 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 C1QTNF1Q9BXJ1 281 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 CHMP4BQ9H444 224 aaKnown RBP12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 TMOD4Q9NZQ9 345 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 BTBD7Q9P203 1132 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 ABCF2Q9UG63 623 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 MYH1P12882 1939 aa12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 COL11A1P12107 1806 aaPredicted RBP12.09□□□□□ -0.47
R3HDM2-210ENST00000547019 WDFY4Q6ZS81 3184 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 PNMA6EA0A0J9YXQ4 647 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 SEMA3EO15041 775 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 KIAA0355O15063 1070 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 CLTBP09497 229 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 KCNQ1P51787 676 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 ATP2B2Q01814 1243 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 WDR78Q5VTH9 848 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 PI16Q6UXB8 463 aa12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 GAS2L1Q99501 681 aaPredicted RBP12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.08□□□□□ -0.48
R3HDM2-210ENST00000547019 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 CIAO1O76071 339 aa12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 FPGSQ05932 587 aa12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 PRAMEF19Q5SWL8 479 aa12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 C16orf59Q7L2K0 433 aa12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 ALYREFQ86V81 257 aaKnown RBP12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 CCAR1Q8IX12 1150 aaKnown RBP12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 COPRSQ9NQ92 184 aa12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.07□□□□□ -0.48
R3HDM2-210ENST00000547019 PRRC2BQ5JSZ5 2229 aaKnown RBP12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 C19orf81C9J6K1 198 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 ZBTB22O15209 634 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 SEPT4O43236 478 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 PQBP1O60828 265 aaKnown RBP12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 ASNSP08243 561 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 RAG1P15918 1043 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 ZYXQ15942 572 aaKnown RBP12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 RASIP1Q5U651 963 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 CEP85Q6P2H3 762 aa12.06□□□□□ -0.48
R3HDM2-210ENST00000547019 ARRDC4Q8NCT1 418 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms