RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PPP1R13LQ8WUF5 828 aa8.44□□□□□ -1.06
SNHG1-224ENST00000545688 CYB5D2Q8WUJ1 264 aa8.44□□□□□ -1.06
SNHG1-224ENST00000545688 FAM168AQ92567 244 aa8.44□□□□□ -1.06
SNHG1-224ENST00000545688 REV1Q9UBZ9 1251 aa8.44□□□□□ -1.06
SNHG1-224ENST00000545688 CEP131Q9UPN4 1083 aa8.44□□□□□ -1.06
SNHG1-224ENST00000545688 YARSP54577 528 aaKnown RBP8.43□□□□□ -1.06
SNHG1-224ENST00000545688 THAP5Q7Z6K1 395 aa8.43□□□□□ -1.06
SNHG1-224ENST00000545688 UBE2FQ969M7 185 aa8.43□□□□□ -1.06
SNHG1-224ENST00000545688 Q96M66 194 aa8.43□□□□□ -1.06
SNHG1-224ENST00000545688 ZSWIM5Q9P217 1185 aa8.43□□□□□ -1.06
SNHG1-224ENST00000545688 PRR36Q9H6K5 1346 aa8.43□□□□□ -1.06
SNHG1-224ENST00000545688 TLR3O15455 904 aaKnown RBP8.42□□□□□ -1.06
SNHG1-224ENST00000545688 HTR3BO95264 441 aa8.42□□□□□ -1.06
SNHG1-224ENST00000545688 MPP2Q14168 576 aa8.42□□□□□ -1.06
SNHG1-224ENST00000545688 REC114Q7Z4M0 266 aa8.42□□□□□ -1.06
SNHG1-224ENST00000545688 KLHL3Q9UH77 587 aa8.42□□□□□ -1.06
SNHG1-224ENST00000545688 CTNND2Q9UQB3 1225 aa8.42□□□□□ -1.06
SNHG1-224ENST00000545688 FBXL19Q6PCT2 694 aa8.41□□□□□ -1.06
SNHG1-224ENST00000545688 FAM196AQ6ZSG2 479 aa8.41□□□□□ -1.06
SNHG1-224ENST00000545688 SLFN12Q8IYM2 578 aa8.41□□□□□ -1.06
SNHG1-224ENST00000545688 PIWIL2Q8TC59 973 aaKnown RBP8.41□□□□□ -1.06
SNHG1-224ENST00000545688 CHURC1-FNTBB4DL54 471 aa8.4□□□□□ -1.06
SNHG1-224ENST00000545688 DNAJA2O60884 412 aa8.4□□□□□ -1.06
SNHG1-224ENST00000545688 TMCO4Q5TGY1 634 aa8.4□□□□□ -1.06
SNHG1-224ENST00000545688 POU5F2Q8N7G0 328 aa8.4□□□□□ -1.06
SNHG1-224ENST00000545688 KCNQ5Q9NR82 932 aa8.4□□□□□ -1.06
SNHG1-224ENST00000545688 WASH4PA8MWX3 477 aa8.39□□□□□ -1.07
SNHG1-224ENST00000545688 EIF4A3P38919 411 aaKnown RBP8.39□□□□□ -1.07
SNHG1-224ENST00000545688 BAHD1Q8TBE0 780 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-224ENST00000545688 DUSP15Q9H1R2 295 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-224ENST00000545688 C19orf73Q9NVV2 129 aa8.39□□□□□ -1.07
SNHG1-224ENST00000545688 ZBTB7CA1YPR0 619 aa8.38□□□□□ -1.07
SNHG1-224ENST00000545688 YBX3P16989 372 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNHG1-224ENST00000545688 HS2ST1Q7LGA3 356 aa8.38□□□□□ -1.07
SNHG1-224ENST00000545688 ZSWIM9Q86XI8 627 aa8.38□□□□□ -1.07
SNHG1-224ENST00000545688 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
SNHG1-224ENST00000545688 SUPT16HQ9Y5B9 1047 aaKnown RBP8.38□□□□□ -1.07
SNHG1-224ENST00000545688 GREM1O60565 184 aa8.37□□□□□ -1.07
SNHG1-224ENST00000545688 ESR1P03372 595 aa8.37□□□□□ -1.07
SNHG1-224ENST00000545688 ZNF16P17020 682 aaPredicted RBP8.37□□□□□ -1.07
SNHG1-224ENST00000545688 TNNI2P48788 182 aa8.37□□□□□ -1.07
SNHG1-224ENST00000545688 CWF19L2Q2TBE0 894 aaKnown RBP8.37□□□□□ -1.07
SNHG1-224ENST00000545688 FYB2Q5VWT5 728 aa8.37□□□□□ -1.07
SNHG1-224ENST00000545688 DTWD2Q8NBA8 298 aa8.37□□□□□ -1.07
SNHG1-224ENST00000545688 RNF141Q8WVD5 230 aa8.37□□□□□ -1.07
SNHG1-224ENST00000545688 LRRC3Q9BY71 257 aa8.37□□□□□ -1.07
SNHG1-224ENST00000545688 LRRN2O75325 713 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 CRKP46108 304 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 KCNMB1Q16558 191 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 TMPRSS7Q7RTY8 843 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 PHACTR4Q8IZ21 702 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 ZNF296Q8WUU4 475 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-224ENST00000545688 TMEM40Q8WWA1 233 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 CCDC74BQ96LY2 380 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 ALPK1Q96QP1 1244 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 BCL11AQ9H165 835 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 BRMS1Q9HCU9 246 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 SLAMF8Q9P0V8 285 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 ADAMTS1Q9UHI8 967 aa8.36□□□□□ -1.07
SNHG1-224ENST00000545688 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 SRFP11831 508 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 TPP2P29144 1249 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-224ENST00000545688 GDNFP39905 211 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 AFMP43652 599 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 GAB4Q2WGN9 574 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 ZNF648Q5T619 568 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-224ENST00000545688 LDLRAD1Q5T700 205 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 CREG2Q8IUH2 290 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 KREMEN1Q96MU8 473 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 KIF2CQ99661 725 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 TRIT1Q9H3H1 467 aaKnown RBP8.35□□□□□ -1.07
SNHG1-224ENST00000545688 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.35□□□□□ -1.07
SNHG1-224ENST00000545688 KCNH3Q9ULD8 1083 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 PCDHB14Q9Y5E9 798 aa8.35□□□□□ -1.07
SNHG1-224ENST00000545688 ZNF503-AS2A6NEH8 195 aa8.34□□□□□ -1.07
SNHG1-224ENST00000545688 C8AP07357 584 aa8.34□□□□□ -1.07
SNHG1-224ENST00000545688 RALGPS1Q5JS13 557 aa8.34□□□□□ -1.07
SNHG1-224ENST00000545688 DNAJC25-GNG10A0A024R161 153 aa8.33□□□□□ -1.08
SNHG1-224ENST00000545688 SLC22A31A6NKX4 558 aa8.33□□□□□ -1.08
SNHG1-224ENST00000545688 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-224ENST00000545688 MLECQ14165 292 aa8.33□□□□□ -1.08
SNHG1-224ENST00000545688 ARSHQ5FYA8 562 aa8.33□□□□□ -1.08
SNHG1-224ENST00000545688 TMEM87AQ8NBN3 555 aa8.33□□□□□ -1.08
SNHG1-224ENST00000545688 KIRREL1Q96J84 757 aa8.33□□□□□ -1.08
SNHG1-224ENST00000545688 ASPNQ9BXN1 380 aa8.33□□□□□ -1.08
SNHG1-224ENST00000545688 GPATCH2Q9NW75 528 aa8.33□□□□□ -1.08
SNHG1-224ENST00000545688 UBP1Q9NZI7 540 aa8.33□□□□□ -1.08
SNHG1-224ENST00000545688 ATE1O95260 518 aa8.32□□□□□ -1.08
SNHG1-224ENST00000545688 MFAP1P55081 439 aaKnown RBP8.32□□□□□ -1.08
SNHG1-224ENST00000545688 TTC6Q86TZ1 520 aa8.32□□□□□ -1.08
SNHG1-224ENST00000545688 TSPYL5Q86VY4 417 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-224ENST00000545688 CCDC120Q96HB5 630 aa8.32□□□□□ -1.08
SNHG1-224ENST00000545688 DUSP13Q9UII6 198 aa8.32□□□□□ -1.08
SNHG1-224ENST00000545688 LRRC10BA6NIK2 292 aa8.31□□□□□ -1.08
SNHG1-224ENST00000545688 RGS13O14921 159 aa8.31□□□□□ -1.08
SNHG1-224ENST00000545688 GBP1P32455 592 aa8.31□□□□□ -1.08
SNHG1-224ENST00000545688 SEZ6Q53EL9 994 aa8.31□□□□□ -1.08
SNHG1-224ENST00000545688 OVOS1Q6IE37 1185 aa8.31□□□□□ -1.08
SNHG1-224ENST00000545688 LIN37Q96GY3 246 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms