RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 ACER1Q8TDN7 264 aa17.06■□□□□ 0.32
LTBR-209ENST00000541102 OSBP2Q969R2 916 aa17.06■□□□□ 0.32
LTBR-209ENST00000541102 STRBPQ96SI9 672 aaKnown RBP17.06■□□□□ 0.32
LTBR-209ENST00000541102 EMILIN3Q9NT22 766 aa17.06■□□□□ 0.32
LTBR-209ENST00000541102 MYH7P12883 1935 aa17.06■□□□□ 0.32
LTBR-209ENST00000541102 HOXA7P31268 230 aaPredicted RBP17.05■□□□□ 0.32
LTBR-209ENST00000541102 GCLCP48506 637 aaPredicted RBP17.05■□□□□ 0.32
LTBR-209ENST00000541102 TTC22Q5TAA0 569 aa17.05■□□□□ 0.32
LTBR-209ENST00000541102 APPBP2Q92624 585 aa17.05■□□□□ 0.32
LTBR-209ENST00000541102 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
LTBR-209ENST00000541102 SWAP70Q9UH65 585 aa17.05■□□□□ 0.32
LTBR-209ENST00000541102 KIAA0100Q14667 2235 aaKnown RBP17.04■□□□□ 0.32
LTBR-209ENST00000541102 M0R2C6 588 aa17.04■□□□□ 0.32
LTBR-209ENST00000541102 TNPO2O14787 897 aaKnown RBP17.04■□□□□ 0.32
LTBR-209ENST00000541102 ZFYP08048 801 aaPredicted RBP17.04■□□□□ 0.32
LTBR-209ENST00000541102 GUCY1A2P33402 732 aa17.04■□□□□ 0.32
LTBR-209ENST00000541102 PRKCZQ05513 592 aa17.04■□□□□ 0.32
LTBR-209ENST00000541102 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
LTBR-209ENST00000541102 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
LTBR-209ENST00000541102 ZNF333Q96JL9 665 aa17.04■□□□□ 0.32
LTBR-209ENST00000541102 TMEM106CQ9BVX2 250 aa17.04■□□□□ 0.32
LTBR-209ENST00000541102 GABRQQ9UN88 632 aa17.04■□□□□ 0.32
LTBR-209ENST00000541102 BAZ2AQ9UIF9 1905 aaKnown RBP17.04■□□□□ 0.32
LTBR-209ENST00000541102 LOC285556D6RIA3 1793 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 POTEFA5A3E0 1075 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 TRIM6-TRIM34B2RNG4 842 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 GPAA1O43292 621 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 APPP05067 770 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 CDK8P49336 464 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 USP14P54578 494 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 FAM110CQ1W6H9 321 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 STK11IPQ8N1F8 1099 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 BIN2Q9UBW5 565 aaPredicted RBP17.03■□□□□ 0.32
LTBR-209ENST00000541102 TAOK2Q9UL54 1235 aa17.03■□□□□ 0.32
LTBR-209ENST00000541102 DDX60LQ5H9U9 1706 aaKnown RBP17.02■□□□□ 0.32
LTBR-209ENST00000541102 GSG1L2A8MUP6 293 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 PEX10O60683 326 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 AKR1B1P15121 316 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 SDSP20132 328 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 HERVK_113P62684 666 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 RILPL2Q969X0 211 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 COA7Q96BR5 231 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 EVI5LQ96CN4 794 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
LTBR-209ENST00000541102 KIAA1683Q9H0B3 1180 aa17.02■□□□□ 0.32
LTBR-209ENST00000541102 USP17L15C9J2P7 530 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 USP17L13C9JLJ4 530 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 USP17L11C9JVI0 530 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 USP17L18D6R9N7 530 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 USP17L22D6RA61 530 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 USP17L17D6RBQ6 530 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 USP17L19D6RCP7 530 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 USP17L20D6RJB6 530 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 GRK4P32298 578 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 FLT3LGP49771 235 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 USP17L24Q0WX57 530 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 TMEM179Q6ZVK1 233 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 C16orf86Q6ZW13 317 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 C12orf42Q96LP6 360 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 PAGR1Q9BTK6 254 aa17.01■□□□□ 0.31
LTBR-209ENST00000541102 ARPP21Q9UBL0 812 aaPredicted RBP17.01■□□□□ 0.31
LTBR-209ENST00000541102 A0A1W2PRG0 241 aa17■□□□□ 0.31
LTBR-209ENST00000541102 GNAT2P19087 354 aa17■□□□□ 0.31
LTBR-209ENST00000541102 EN2P19622 333 aaPredicted RBP17■□□□□ 0.31
LTBR-209ENST00000541102 TDO2P48775 406 aa17■□□□□ 0.31
LTBR-209ENST00000541102 ATP2B2Q01814 1243 aa17■□□□□ 0.31
LTBR-209ENST00000541102 CLEC10AQ8IUN9 316 aa17■□□□□ 0.31
LTBR-209ENST00000541102 GPRC5AQ8NFJ5 357 aa17■□□□□ 0.31
LTBR-209ENST00000541102 CCDC17Q96LX7 622 aa17■□□□□ 0.31
LTBR-209ENST00000541102 TXNRD2Q9NNW7 524 aa17■□□□□ 0.31
LTBR-209ENST00000541102 RBPJLQ9UBG7 517 aa17■□□□□ 0.31
LTBR-209ENST00000541102 MORF4L1Q9UBU8 362 aa17■□□□□ 0.31
LTBR-209ENST00000541102 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
LTBR-209ENST00000541102 MGAMO43451 1857 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 ADCY3O60266 1144 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 VCAM1P19320 739 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 MTFR1Q15390 333 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 SBK1Q52WX2 424 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 ZMYM1Q5SVZ6 1142 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 GIMAP6Q6P9H5 292 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 CATSPERGQ6ZRH7 1159 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 CCDC129Q6ZRS4 1044 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
LTBR-209ENST00000541102 RPAP3Q9H6T3 665 aaPredicted RBP16.99■□□□□ 0.31
LTBR-209ENST00000541102 A0A0D9SFI3 127 aa16.98■□□□□ 0.31
LTBR-209ENST00000541102 PATL2C9JE40 543 aaKnown RBP16.98■□□□□ 0.31
LTBR-209ENST00000541102 ELNP15502 786 aa16.98■□□□□ 0.31
LTBR-209ENST00000541102 ICA1Q05084 483 aa16.98■□□□□ 0.31
LTBR-209ENST00000541102 Q3C1V9 767 aa16.98■□□□□ 0.31
LTBR-209ENST00000541102 SIAH1Q8IUQ4 282 aa16.98■□□□□ 0.31
LTBR-209ENST00000541102 CCAR1Q8IX12 1150 aaKnown RBP16.98■□□□□ 0.31
LTBR-209ENST00000541102 IFNL3Q8IZI9 196 aa16.98■□□□□ 0.31
LTBR-209ENST00000541102 MKNK2Q9HBH9 465 aa16.98■□□□□ 0.31
LTBR-209ENST00000541102 ARHGEF10LQ9HCE6 1279 aa16.98■□□□□ 0.31
LTBR-209ENST00000541102 EPB41L4AQ9HCS5 686 aaPredicted RBP16.98■□□□□ 0.31
LTBR-209ENST00000541102 DOCK3Q8IZD9 2030 aa16.97■□□□□ 0.31
LTBR-209ENST00000541102 ERVK-9P63128 1117 aa16.97■□□□□ 0.31
LTBR-209ENST00000541102 ERVK-24P63145 666 aa16.97■□□□□ 0.31
LTBR-209ENST00000541102 UBXN2AP68543 259 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms