RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 DPEP1P16444 411 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 TGFB2P61812 414 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 KIAA2012Q0VF49 1180 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 RRP12Q5JTH9 1297 aaKnown RBP11.31□□□□□ -0.6
MDH1-215ENST00000539945 C12orf60Q5U649 245 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 STRIP1Q5VSL9 837 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 MCTP1Q6DN14 999 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 APOA5Q6Q788 366 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 RTKN2Q8IZC4 609 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 MRIQ9BWK5 157 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 MCM9Q9NXL9 1143 aa11.31□□□□□ -0.6
MDH1-215ENST00000539945 ERICH2A1L162 156 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 C21orf2O43822 256 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 ECE2O60344 883 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 DTNBO60941 627 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 ZBTB7AO95365 584 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 POLD1P28340 1107 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 RCAN1P53805 252 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 RHBDL3P58872 404 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 COPS2P61201 443 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 PDE4BQ07343 736 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 CCDC93Q567U6 631 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 HHIPL2Q6UWX4 724 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 NFXL1Q6ZNB6 911 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 AMOTL1Q8IY63 956 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 TGFBRAP1Q8WUH2 860 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 PSMD1Q99460 953 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 UBAC1Q9BSL1 405 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 DBNDD1Q9H9R9 158 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 SENP2Q9HC62 589 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 LMBRD1Q9NUN5 540 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 TTF2Q9UNY4 1162 aaKnown RBP11.3□□□□□ -0.6
MDH1-215ENST00000539945 DAGLAQ9Y4D2 1042 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 NID2Q14112 1375 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 ROBO3Q96MS0 1386 aa11.3□□□□□ -0.6
MDH1-215ENST00000539945 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 VPS37CA5D8V6 355 aaPredicted RBP11.29□□□□□ -0.6
MDH1-215ENST00000539945 USP17L3A6NCW0 530 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 USP17L4A6NCW7 530 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 CCDC69A6NI79 296 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 ZBTB43O43298 467 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 USP17L8P0C7I0 530 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 CYP2D6P10635 497 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 METAP2P50579 478 aaKnown RBP eCLIP11.29□□□□□ -0.6
MDH1-215ENST00000539945 WTAPQ15007 396 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 SEC23AQ15436 765 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 DACT2Q5SW24 774 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 USP17L1Q7RTZ2 530 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 TEX11Q8IYF3 940 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 STK11IPQ8N1F8 1099 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 RGS22Q8NE09 1264 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 DDX11Q96FC9 970 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 ZSCAN10Q96SZ4 725 aaPredicted RBP11.29□□□□□ -0.6
MDH1-215ENST00000539945 VPS33BQ9H267 617 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 SLC12A7Q9Y666 1083 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
MDH1-215ENST00000539945 CPLX1O14810 134 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 RANBP6O60518 1105 aaKnown RBP11.28□□□□□ -0.6
MDH1-215ENST00000539945 DGAT1O75907 488 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 CDKL5O76039 1030 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 FDPSP14324 419 aaKnown RBP11.28□□□□□ -0.6
MDH1-215ENST00000539945 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
MDH1-215ENST00000539945 AOC3Q16853 763 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 CPLX2Q6PUV4 134 aaKnown RBP11.28□□□□□ -0.6
MDH1-215ENST00000539945 SYNE3Q6ZMZ3 975 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 CDC37L1Q7L3B6 337 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 IQCA1Q86XH1 822 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 MAPKAPK5Q8IW41 473 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 TEKT1Q969V4 418 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 ZKSCAN3Q9BRR0 538 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 MXD3Q9BW11 206 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 KCNQ5Q9NR82 932 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 TNKSO95271 1327 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 FLT1P17948 1338 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
MDH1-215ENST00000539945 FOCADQ5VW36 1801 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 DDX60LQ5H9U9 1706 aaKnown RBP11.28□□□□□ -0.6
MDH1-215ENST00000539945 SCN9AQ15858 1988 aa11.28□□□□□ -0.6
MDH1-215ENST00000539945 PPIP5K2O43314 1243 aa11.27□□□□□ -0.6
MDH1-215ENST00000539945 PRPF40AO75400 957 aaKnown RBP11.27□□□□□ -0.6
MDH1-215ENST00000539945 PRDM1O75626 825 aa11.27□□□□□ -0.6
MDH1-215ENST00000539945 PPP2R5BQ15173 497 aa11.27□□□□□ -0.6
MDH1-215ENST00000539945 ENAHQ8N8S7 591 aaPredicted RBP11.27□□□□□ -0.6
MDH1-215ENST00000539945 TMEM87AQ8NBN3 555 aa11.27□□□□□ -0.6
MDH1-215ENST00000539945 CHAMP1Q96JM3 812 aa11.27□□□□□ -0.6
MDH1-215ENST00000539945 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.6
MDH1-215ENST00000539945 FAM217BQ9NTX9 383 aaPredicted RBP11.27□□□□□ -0.6
MDH1-215ENST00000539945 PIM2Q9P1W9 311 aa11.27□□□□□ -0.6
MDH1-215ENST00000539945 CCDC196A0A1B0GTZ2 297 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 GOLGA8AA7E2F4 631 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 F8W031 263 aaPredicted RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 H3BQV1 296 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 POLR3DP05423 398 aaPredicted RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 CDC27P30260 824 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 ADD1P35611 737 aaKnown RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 SLC19A1P41440 591 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms