RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 OTOFQ9HC10 1997 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 TNKSO95271 1327 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 CCDC196A0A1B0GTZ2 297 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 PHF20L1A8MW92 1017 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 DHX16O60231 1041 aaKnown RBP11.98□□□□□ -0.49
CLPB-210ENST00000539148 GH2P01242 217 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
CLPB-210ENST00000539148 RCAN1P53805 252 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 USP14P54578 494 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 ADCK5Q3MIX3 580 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
CLPB-210ENST00000539148 STOX1Q6ZVD7 989 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 CATIPQ7Z7H3 387 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 ERO1BQ86YB8 467 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 SLC10A4Q96EP9 437 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 ZSCAN31Q96LW9 406 aaPredicted RBP11.98□□□□□ -0.49
CLPB-210ENST00000539148 FEZ1Q99689 392 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 GOPCQ9HD26 462 aa11.98□□□□□ -0.49
CLPB-210ENST00000539148 SCAF8Q9UPN6 1271 aaKnown RBP11.98□□□□□ -0.49
CLPB-210ENST00000539148 TMEM88BA6NKF7 163 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 FAM196BA6NMK8 535 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 C19orf81C9J6K1 198 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 TRAF5O00463 557 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 GDF11O95390 407 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 AKR1B1P15121 316 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 PTMSP20962 102 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 KIF5BP33176 963 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 APLP1P51693 650 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 EXOSC10Q01780 885 aaKnown RBP11.97□□□□□ -0.49
CLPB-210ENST00000539148 ATP2B2Q01814 1243 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 PPATQ06203 517 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 PRKG1Q13976 671 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 FAM47AQ5JRC9 791 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 ANKS1AQ92625 1134 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 WDR18Q9BV38 432 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 UPF3BQ9BZI7 483 aaKnown RBP11.97□□□□□ -0.49
CLPB-210ENST00000539148 DNAJC18Q9H819 358 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 MTMR4Q9NYA4 1195 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
CLPB-210ENST00000539148 PASKQ96RG2 1323 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 USP17L10C9JJH3 530 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 SEPT2Q15019 361 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 LDLRAD1Q5T700 205 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 RCSD1Q6JBY9 416 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 Q6ZUG5 572 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 SGMS1Q86VZ5 419 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 LPAR1Q92633 364 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 MKL1Q969V6 931 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 CEP95Q96GE4 821 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 HHIPL1Q96JK4 782 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 MAP3K14Q99558 947 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 SH2B1Q9NRF2 756 aaPredicted RBP11.96□□□□□ -0.49
CLPB-210ENST00000539148 CLIP2Q9UDT6 1046 aa11.96□□□□□ -0.49
CLPB-210ENST00000539148 SSC5DA1L4H1 1573 aa11.96□□□□□ -0.5
CLPB-210ENST00000539148 PCNTO95613 3336 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 SH2B2O14492 632 aaPredicted RBP11.95□□□□□ -0.5
CLPB-210ENST00000539148 CXCL11O14625 94 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 DDAH1O94760 285 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 ZBTB48P10074 688 aaPredicted RBP11.95□□□□□ -0.5
CLPB-210ENST00000539148 PTPRAP18433 802 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 INPP5BP32019 993 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 GNAQP50148 359 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 HUNKP57058 714 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 PABPC4Q13310 644 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLPB-210ENST00000539148 VGLL4Q14135 290 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 CYB5R4Q7L1T6 521 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 ENAHQ8N8S7 591 aaPredicted RBP11.95□□□□□ -0.5
CLPB-210ENST00000539148 ZNF280CQ8ND82 737 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 PNMA1Q8ND90 353 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 CTCFLQ8NI51 663 aaPredicted RBP11.95□□□□□ -0.5
CLPB-210ENST00000539148 IGDCC4Q8TDY8 1250 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 BRF1Q92994 677 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 ZKSCAN4Q969J2 545 aaPredicted RBP11.95□□□□□ -0.5
CLPB-210ENST00000539148 CCDC102AQ96A19 550 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 ZNF274Q96GC6 653 aaPredicted RBP11.95□□□□□ -0.5
CLPB-210ENST00000539148 AGXT2Q9BYV1 514 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 INCENPQ9NQS7 918 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 TMOD4Q9NZQ9 345 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
CLPB-210ENST00000539148 NAP1L2Q9ULW6 460 aaPredicted RBP11.95□□□□□ -0.5
CLPB-210ENST00000539148 LIMCH1Q9UPQ0 1083 aa11.95□□□□□ -0.5
CLPB-210ENST00000539148 IGKV6D-41A0A0C4DH26 115 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 ZBTB43O43298 467 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 CDKL5O76039 1030 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 EEF2P13639 858 aaKnown RBP11.94□□□□□ -0.5
CLPB-210ENST00000539148 NOVP48745 357 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 TRAF1Q13077 416 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 PPIL2Q13356 520 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 GPATCH4Q5T3I0 446 aaKnown RBP11.94□□□□□ -0.5
CLPB-210ENST00000539148 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.94□□□□□ -0.5
CLPB-210ENST00000539148 FASTKD5Q7L8L6 764 aaKnown RBP11.94□□□□□ -0.5
CLPB-210ENST00000539148 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
CLPB-210ENST00000539148 GMCL1P1Q8NEA9 526 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 LZTS2Q9BRK4 669 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 ZKSCAN3Q9BRR0 538 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 KIAA1683Q9H0B3 1180 aa11.94□□□□□ -0.5
CLPB-210ENST00000539148 RBM28Q9NW13 759 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms