RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 USP17L2Q6R6M4 530 aa21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 ZNF333Q96JL9 665 aa21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 C12orf42Q96LP6 360 aa21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 TAOK2Q9UL54 1235 aa21.45■■□□□ 1.02
TNFRSF1A-209ENST00000536717 GREB1LQ9C091 1923 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF1A-209ENST00000536717 MYPNQ86TC9 1320 aa21.44■■□□□ 1.02
TNFRSF1A-209ENST00000536717 GSG1L2A8MUP6 293 aa21.44■■□□□ 1.02
TNFRSF1A-209ENST00000536717 M0R2C6 588 aa21.44■■□□□ 1.02
TNFRSF1A-209ENST00000536717 GPAA1O43292 621 aa21.44■■□□□ 1.02
TNFRSF1A-209ENST00000536717 HOXD10P28358 340 aa21.44■■□□□ 1.02
TNFRSF1A-209ENST00000536717 DDRGK1Q96HY6 314 aa21.44■■□□□ 1.02
TNFRSF1A-209ENST00000536717 PPP4R2Q9NY27 417 aa21.44■■□□□ 1.02
TNFRSF1A-209ENST00000536717 STAP2Q9UGK3 403 aa21.44■■□□□ 1.02
TNFRSF1A-209ENST00000536717 CDK8P49336 464 aa21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 PDE1AP54750 535 aa21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 IRX3P78415 501 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 PRKCZQ05513 592 aa21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 ZYXQ15942 572 aaKnown RBP21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 C16orf86Q6ZW13 317 aa21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 AMOTL1Q8IY63 956 aa21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 SEC62Q99442 399 aaKnown RBP21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 P2RX7Q99572 595 aaKnown RBP21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 FEZ1Q99689 392 aa21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 FSD1Q9BTV5 496 aa21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 KIAA1683Q9H0B3 1180 aa21.43■■□□□ 1.02
TNFRSF1A-209ENST00000536717 RLFQ13129 1914 aa21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 PLXNB2O15031 1838 aa21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 POTEFA5A3E0 1075 aa21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 MPHOSPH10O00566 681 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 AKR1B1P15121 316 aa21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 LRRFIP1Q32MZ4 808 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 NBPF11Q86T75 865 aa21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 SH3TC2Q8TF17 1288 aa21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 LNPKQ9C0E8 428 aa21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 ARPP21Q9UBL0 812 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 GABRQQ9UN88 632 aa21.42■■□□□ 1.02
TNFRSF1A-209ENST00000536717 PARP14Q460N5 1801 aa21.41■■□□□ 1.02
TNFRSF1A-209ENST00000536717 A0A1W2PRG0 241 aa21.41■■□□□ 1.02
TNFRSF1A-209ENST00000536717 USP14P54578 494 aa21.41■■□□□ 1.02
TNFRSF1A-209ENST00000536717 HERVK_113P62684 666 aa21.41■■□□□ 1.02
TNFRSF1A-209ENST00000536717 B4GALNT3Q6L9W6 998 aa21.41■■□□□ 1.02
TNFRSF1A-209ENST00000536717 GIMAP6Q6P9H5 292 aa21.41■■□□□ 1.02
TNFRSF1A-209ENST00000536717 TMEM179Q6ZVK1 233 aa21.41■■□□□ 1.02
TNFRSF1A-209ENST00000536717 EPB41L4AQ9HCS5 686 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1A-209ENST00000536717 TNPO2O14787 897 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1A-209ENST00000536717 SBK1Q52WX2 424 aa21.4■■□□□ 1.02
TNFRSF1A-209ENST00000536717 ZMYM1Q5SVZ6 1142 aa21.4■■□□□ 1.02
TNFRSF1A-209ENST00000536717 RAET1EQ8TD07 263 aa21.4■■□□□ 1.02
TNFRSF1A-209ENST00000536717 MORF4L1Q9UBU8 362 aa21.4■■□□□ 1.02
TNFRSF1A-209ENST00000536717 PEX10O60683 326 aa21.39■■□□□ 1.02
TNFRSF1A-209ENST00000536717 VCAM1P19320 739 aa21.39■■□□□ 1.02
TNFRSF1A-209ENST00000536717 POTEEQ6S8J3 1075 aa21.39■■□□□ 1.02
TNFRSF1A-209ENST00000536717 CENPQQ7L2Z9 268 aaPredicted RBP21.39■■□□□ 1.02
TNFRSF1A-209ENST00000536717 CLEC10AQ8IUN9 316 aa21.39■■□□□ 1.02
TNFRSF1A-209ENST00000536717 CCDC17Q96LX7 622 aa21.39■■□□□ 1.02
TNFRSF1A-209ENST00000536717 TXNRD2Q9NNW7 524 aa21.39■■□□□ 1.02
TNFRSF1A-209ENST00000536717 MYH4Q9Y623 1939 aa21.39■■□□□ 1.02
TNFRSF1A-209ENST00000536717 GNAT2P19087 354 aa21.39■■□□□ 1.01
TNFRSF1A-209ENST00000536717 SIAH1Q8IUQ4 282 aa21.39■■□□□ 1.01
TNFRSF1A-209ENST00000536717 GRK4P32298 578 aa21.38■■□□□ 1.01
TNFRSF1A-209ENST00000536717 FLT3LGP49771 235 aa21.38■■□□□ 1.01
TNFRSF1A-209ENST00000536717 NUCB1Q02818 461 aa21.38■■□□□ 1.01
TNFRSF1A-209ENST00000536717 EVI5LQ96CN4 794 aa21.38■■□□□ 1.01
TNFRSF1A-209ENST00000536717 RBPJLQ9UBG7 517 aa21.38■■□□□ 1.01
TNFRSF1A-209ENST00000536717 ROBO3Q96MS0 1386 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 USP17L15C9J2P7 530 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 PATL2C9JE40 543 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 USP17L13C9JLJ4 530 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 USP17L11C9JVI0 530 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 USP17L18D6R9N7 530 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 USP17L22D6RA61 530 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 USP17L17D6RBQ6 530 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 USP17L19D6RCP7 530 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 USP17L20D6RJB6 530 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 MYCP01106 439 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 USP17L24Q0WX57 530 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 CATSPERGQ6ZRH7 1159 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 CHD1LQ86WJ1 897 aa21.37■■□□□ 1.01
TNFRSF1A-209ENST00000536717 MINDY4BA8MYZ0 360 aa21.36■■□□□ 1.01
TNFRSF1A-209ENST00000536717 ICA1Q05084 483 aa21.36■■□□□ 1.01
TNFRSF1A-209ENST00000536717 IFNL3Q8IZI9 196 aa21.36■■□□□ 1.01
TNFRSF1A-209ENST00000536717 COA7Q96BR5 231 aa21.36■■□□□ 1.01
TNFRSF1A-209ENST00000536717 TDO2P48775 406 aa21.35■■□□□ 1.01
TNFRSF1A-209ENST00000536717 MTFR1Q15390 333 aa21.35■■□□□ 1.01
TNFRSF1A-209ENST00000536717 Q3C1V9 767 aa21.35■■□□□ 1.01
TNFRSF1A-209ENST00000536717 KIAA1755Q5JYT7 1200 aa21.35■■□□□ 1.01
TNFRSF1A-209ENST00000536717 TMEM106CQ9BVX2 250 aa21.35■■□□□ 1.01
TNFRSF1A-209ENST00000536717 RPAP3Q9H6T3 665 aaPredicted RBP21.35■■□□□ 1.01
TNFRSF1A-209ENST00000536717 COL11A1P12107 1806 aaPredicted RBP21.35■■□□□ 1.01
TNFRSF1A-209ENST00000536717 APPP05067 770 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 EN2P19622 333 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 RASA1P20936 1047 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 ERVK-9P63128 1117 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 ERVK-24P63145 666 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 IRF5Q13568 498 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 CCDC129Q6ZRS4 1044 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 STK11IPQ8N1F8 1099 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 SLAIN1Q8ND83 568 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 GPRC5AQ8NFJ5 357 aa21.34■■□□□ 1.01
TNFRSF1A-209ENST00000536717 GTF3C2Q8WUA4 911 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms