RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ARPP21Q9UBL0 812 aaPredicted RBP15.77■□□□□ 0.12
PRKDC-206ENST00000536429 BRCA2P51587 3418 aa15.77■□□□□ 0.11
PRKDC-206ENST00000536429 ZSWIM8A7E2V4 1837 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 C19orf81C9J6K1 198 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 PEX10O60683 326 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 GNAT2P19087 354 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 TDO2P48775 406 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 SIAH1Q8IUQ4 282 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 AMOTL1Q8IY63 956 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 SMCR8Q8TEV9 937 aaPredicted RBP15.76■□□□□ 0.11
PRKDC-206ENST00000536429 TRIM47Q96LD4 638 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 FEZ1Q99689 392 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 PTPN22Q9Y2R2 807 aa15.76■□□□□ 0.11
PRKDC-206ENST00000536429 LOC285556D6RIA3 1793 aa15.75■□□□□ 0.11
PRKDC-206ENST00000536429 PSMC4P43686 418 aa15.75■□□□□ 0.11
PRKDC-206ENST00000536429 NMIQ13287 307 aaPredicted RBP15.75■□□□□ 0.11
PRKDC-206ENST00000536429 USP17L2Q6R6M4 530 aa15.75■□□□□ 0.11
PRKDC-206ENST00000536429 TMEM179Q6ZVK1 233 aa15.75■□□□□ 0.11
PRKDC-206ENST00000536429 ZNF589Q86UQ0 364 aaPredicted RBP15.75■□□□□ 0.11
PRKDC-206ENST00000536429 ANKRD13CQ8N6S4 541 aa15.75■□□□□ 0.11
PRKDC-206ENST00000536429 P2RX7Q99572 595 aaKnown RBP15.75■□□□□ 0.11
PRKDC-206ENST00000536429 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.75■□□□□ 0.11
PRKDC-206ENST00000536429 KIAA1683Q9H0B3 1180 aa15.75■□□□□ 0.11
PRKDC-206ENST00000536429 OSBPP22059 807 aa15.74■□□□□ 0.11
PRKDC-206ENST00000536429 HOXA7P31268 230 aaPredicted RBP15.74■□□□□ 0.11
PRKDC-206ENST00000536429 KIAA1755Q5JYT7 1200 aa15.74■□□□□ 0.11
PRKDC-206ENST00000536429 POTEEQ6S8J3 1075 aa15.74■□□□□ 0.11
PRKDC-206ENST00000536429 C12orf42Q96LP6 360 aa15.74■□□□□ 0.11
PRKDC-206ENST00000536429 HELLSQ9NRZ9 838 aa15.74■□□□□ 0.11
PRKDC-206ENST00000536429 PNMA3Q9UL41 463 aa15.74■□□□□ 0.11
PRKDC-206ENST00000536429 PTCH2Q9Y6C5 1203 aa15.74■□□□□ 0.11
PRKDC-206ENST00000536429 ROBO3Q96MS0 1386 aa15.74■□□□□ 0.11
PRKDC-206ENST00000536429 PRDM1O75626 825 aa15.73■□□□□ 0.11
PRKDC-206ENST00000536429 GSPT1P15170 499 aaKnown RBP15.73■□□□□ 0.11
PRKDC-206ENST00000536429 VCAM1P19320 739 aa15.73■□□□□ 0.11
PRKDC-206ENST00000536429 SDSP20132 328 aa15.73■□□□□ 0.11
PRKDC-206ENST00000536429 RASA1P20936 1047 aa15.73■□□□□ 0.11
PRKDC-206ENST00000536429 PABPC4Q13310 644 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRKDC-206ENST00000536429 CCDC17Q96LX7 622 aa15.73■□□□□ 0.11
PRKDC-206ENST00000536429 TAOK2Q9UL54 1235 aa15.73■□□□□ 0.11
PRKDC-206ENST00000536429 TACC3Q9Y6A5 838 aa15.73■□□□□ 0.11
PRKDC-206ENST00000536429 FMNL1O95466 1100 aaPredicted RBP15.72■□□□□ 0.11
PRKDC-206ENST00000536429 USP14P54578 494 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 SOX10P56693 466 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 HERVK_113P62684 666 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 IRX3P78415 501 aaPredicted RBP15.72■□□□□ 0.11
PRKDC-206ENST00000536429 ICA1Q05084 483 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 KIF22Q14807 665 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 MCMDC2Q4G0Z9 681 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 NACAP1Q9BZK3 213 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 NAPBQ9H115 298 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 TXNRD2Q9NNW7 524 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 INCENPQ9NQS7 918 aa15.72■□□□□ 0.11
PRKDC-206ENST00000536429 PPARAQ07869 468 aa15.71■□□□□ 0.11
PRKDC-206ENST00000536429 FAM110CQ1W6H9 321 aa15.71■□□□□ 0.11
PRKDC-206ENST00000536429 SKAP1Q86WV1 359 aa15.71■□□□□ 0.11
PRKDC-206ENST00000536429 RPAP3Q9H6T3 665 aaPredicted RBP15.71■□□□□ 0.11
PRKDC-206ENST00000536429 MKNK2Q9HBH9 465 aa15.71■□□□□ 0.11
PRKDC-206ENST00000536429 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
PRKDC-206ENST00000536429 GCLCP48506 637 aaPredicted RBP15.7■□□□□ 0.1
PRKDC-206ENST00000536429 ATP2B2Q01814 1243 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 PRKCZQ05513 592 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 CTDSPL2Q05D32 466 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 ARHGEF6Q15052 776 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 TTC22Q5TAA0 569 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 CATSPERGQ6ZRH7 1159 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 SPICE1Q8N0Z3 855 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 RBPJLQ9UBG7 517 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 SRRDQ9UH36 339 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 GABRQQ9UN88 632 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 TMX2Q9Y320 296 aa15.7■□□□□ 0.1
PRKDC-206ENST00000536429 CCDC171Q6TFL3 1326 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 USP17L15C9J2P7 530 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 USP17L13C9JLJ4 530 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 USP17L11C9JVI0 530 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 USP17L18D6R9N7 530 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 USP17L22D6RA61 530 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 USP17L17D6RBQ6 530 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 USP17L19D6RCP7 530 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 USP17L20D6RJB6 530 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 CNMDO75829 334 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 HSPD1P10809 573 aaKnown RBP15.69■□□□□ 0.1
PRKDC-206ENST00000536429 FCGRTP55899 365 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 USP17L24Q0WX57 530 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 Q3C1V9 767 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
PRKDC-206ENST00000536429 TICAM2Q86XR7 235 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 SH3TC2Q8TF17 1288 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 IL25Q9H293 177 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 MORF4L1Q9UBU8 362 aa15.69■□□□□ 0.1
PRKDC-206ENST00000536429 MKI67P46013 3256 aaKnown RBP15.69■□□□□ 0.1
PRKDC-206ENST00000536429 MYPNQ86TC9 1320 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 IGKV6D-41A0A0C4DH26 115 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 GNRH1P01148 92 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 FGAP02671 866 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 ALX1Q15699 326 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 FAM47AQ5JRC9 791 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 ARMC5Q96C12 935 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 PAGR1Q9BTK6 254 aa15.68■□□□□ 0.1
PRKDC-206ENST00000536429 VCPKMTQ9H867 229 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms