RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 LCORLQ8N3X6 602 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 ZCRB1Q8TBF4 217 aaKnown RBP15.2■□□□□ 0.02
HDAC4-214ENST00000535493 CAPZA3Q96KX2 299 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 WDR19Q8NEZ3 1342 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 GSG1L2A8MUP6 293 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 CUL4BQ13620 913 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 RASGRP2Q7LDG7 609 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 GSPT2Q8IYD1 628 aaKnown RBP15.2■□□□□ 0.02
HDAC4-214ENST00000535493 GOLGA5Q8TBA6 731 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 SDR42E1Q8WUS8 393 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 RASSF4Q9H2L5 321 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 RABEP2Q9H5N1 569 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 ASAP1Q9ULH1 1129 aa15.2■□□□□ 0.02
HDAC4-214ENST00000535493 PPP1R3GB7ZBB8 358 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 PATL2C9JE40 543 aaKnown RBP15.19■□□□□ 0.02
HDAC4-214ENST00000535493 UBE3CQ15386 1083 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 RIC1Q4ADV7 1423 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 SRLQ86TD4 932 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 GOLGB1Q14789 3259 aaKnown RBP15.19■□□□□ 0.02
HDAC4-214ENST00000535493 MYO1BO43795 1136 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 CSF1RP07333 972 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 LIFRP42702 1097 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 MRPS25P82663 173 aaKnown RBP15.19■□□□□ 0.02
HDAC4-214ENST00000535493 KRT31Q15323 416 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 LEKR1Q6ZMV7 388 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 CEP112Q8N8E3 955 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 ZBTB38Q8NAP3 1195 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-214ENST00000535493 FANCBQ8NB91 859 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 SLC4A4Q9Y6R1 1079 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
HDAC4-214ENST00000535493 PHRF1Q9P1Y6 1649 aaKnown RBP15.18■□□□□ 0.02
HDAC4-214ENST00000535493 CYP2D7A0A087X1C5 515 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 CTAGE15A4D2H0 777 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 ADAMTS3O15072 1205 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 PDE8BO95263 885 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 CTAGE8P0CG41 777 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 PBX1P40424 430 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 RASGRF1Q13972 1273 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 CTAGE6Q86UF2 777 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 CTAGE4Q8IX94 777 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 SPATA20Q8TB22 786 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 FOXP1Q9H334 677 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-214ENST00000535493 V9GY48 417 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-214ENST00000535493 ERCC5P28715 1186 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-214ENST00000535493 RRAGBQ5VZM2 374 aa15.18■□□□□ 0.02
HDAC4-214ENST00000535493 NAPGQ99747 312 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-214ENST00000535493 TRMT112Q9UI30 125 aaKnown RBP15.18■□□□□ 0.02
HDAC4-214ENST00000535493 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 TRIM75PA6NK02 468 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 PCCAP05165 728 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-214ENST00000535493 VEGFAP15692 232 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-214ENST00000535493 KRT9P35527 623 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 ARHGAP25P42331 645 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 ZNF654Q8IZM8 581 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 FAM204AQ9H8W3 233 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 ABHD10Q9NUJ1 306 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 IRS4O14654 1257 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-214ENST00000535493 DEXIO95424 95 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 EVX2Q03828 476 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 FILIP1LQ4L180 1135 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 CDKAL1Q5VV42 579 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 VGLL2Q8N8G2 317 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 RAB21Q9UL25 225 aa15.17■□□□□ 0.02
HDAC4-214ENST00000535493 ERICH2A1L162 156 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 TRIM49BA6NDI0 452 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 WTIPA6NIX2 430 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-214ENST00000535493 BCAMP50895 628 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 TTF1Q15361 905 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-214ENST00000535493 KIF6Q6ZMV9 814 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 TICAM2Q86XR7 235 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 MSANTD4Q8NCY6 345 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 WASF1Q92558 559 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 PLIN2Q99541 437 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 GDAQ9Y2T3 454 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 MYH8P13535 1937 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 ERLIN1O75477 346 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 SLC4A8Q2Y0W8 1093 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 HSP90B2PQ58FF3 399 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 FKBP15Q5T1M5 1219 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 TRIML1Q8N9V2 468 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 MTRQ99707 1265 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 CWC15Q9P013 229 aaKnown RBP15.16■□□□□ 0.02
HDAC4-214ENST00000535493 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 TJP1Q07157 1748 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 CTSWP56202 376 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 PTGDRQ13258 359 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 UBAC1Q9BSL1 405 aa15.16■□□□□ 0.02
HDAC4-214ENST00000535493 REXO2Q9Y3B8 237 aaKnown RBP15.16■□□□□ 0.02
HDAC4-214ENST00000535493 TMEM94Q12767 1356 aa15.15■□□□□ 0.02
HDAC4-214ENST00000535493 USP5P45974 858 aa15.15■□□□□ 0.02
HDAC4-214ENST00000535493 KANK3Q6NY19 840 aa15.15■□□□□ 0.02
HDAC4-214ENST00000535493 NLRP10Q86W26 655 aa15.15■□□□□ 0.02
HDAC4-214ENST00000535493 CNGA4Q8IV77 575 aa15.15■□□□□ 0.02
HDAC4-214ENST00000535493 HNRNPLLQ8WVV9 542 aaKnown RBP15.15■□□□□ 0.02
HDAC4-214ENST00000535493 MMS19Q96T76 1030 aa15.15■□□□□ 0.02
HDAC4-214ENST00000535493 XDHP47989 1333 aa15.15■□□□□ 0.02
HDAC4-214ENST00000535493 STK36Q9NRP7 1315 aa15.15■□□□□ 0.02
HDAC4-214ENST00000535493 ZNF185O15231 689 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms