RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ZNF333Q96JL9 665 aa36.35■■■■□ 3.41
SSSCA1-207ENST00000533115 C12orf42Q96LP6 360 aa36.35■■■■□ 3.41
SSSCA1-207ENST00000533115 KIAA1683Q9H0B3 1180 aa36.35■■■■□ 3.41
SSSCA1-207ENST00000533115 ARPP21Q9UBL0 812 aaPredicted RBP36.35■■■■□ 3.41
SSSCA1-207ENST00000533115 GSG1L2A8MUP6 293 aa36.34■■■■□ 3.41
SSSCA1-207ENST00000533115 SMIM22K7EJ46 135 aa36.34■■■■□ 3.41
SSSCA1-207ENST00000533115 GPAA1O43292 621 aa36.34■■■■□ 3.41
SSSCA1-207ENST00000533115 GIMAP6Q6P9H5 292 aa36.34■■■■□ 3.41
SSSCA1-207ENST00000533115 C16orf86Q6ZW13 317 aa36.34■■■■□ 3.41
SSSCA1-207ENST00000533115 P2RX7Q99572 595 aaKnown RBP36.34■■■■□ 3.41
SSSCA1-207ENST00000533115 M0R2C6 588 aa36.33■■■■□ 3.41
SSSCA1-207ENST00000533115 CDK8P49336 464 aa36.33■■■■□ 3.41
SSSCA1-207ENST00000533115 PDE1AP54750 535 aa36.33■■■■□ 3.41
SSSCA1-207ENST00000533115 RAET1EQ8TD07 263 aa36.33■■■■□ 3.41
SSSCA1-207ENST00000533115 MYH8P13535 1937 aa36.32■■■■□ 3.41
SSSCA1-207ENST00000533115 IGHDP01880 384 aa36.32■■■■□ 3.4
SSSCA1-207ENST00000533115 GNAT2P19087 354 aa36.32■■■■□ 3.4
SSSCA1-207ENST00000533115 PRKCZQ05513 592 aa36.32■■■■□ 3.4
SSSCA1-207ENST00000533115 TMEM179Q6ZVK1 233 aa36.32■■■■□ 3.4
SSSCA1-207ENST00000533115 SH3TC2Q8TF17 1288 aa36.32■■■■□ 3.4
SSSCA1-207ENST00000533115 TNPO2O14787 897 aaKnown RBP36.31■■■■□ 3.4
SSSCA1-207ENST00000533115 SBK1Q52WX2 424 aa36.31■■■■□ 3.4
SSSCA1-207ENST00000533115 LNPKQ9C0E8 428 aa36.31■■■■□ 3.4
SSSCA1-207ENST00000533115 AKR1B1P15121 316 aa36.3■■■■□ 3.4
SSSCA1-207ENST00000533115 HERVK_113P62684 666 aa36.3■■■■□ 3.4
SSSCA1-207ENST00000533115 B4GALNT3Q6L9W6 998 aa36.3■■■■□ 3.4
SSSCA1-207ENST00000533115 CCDC17Q96LX7 622 aa36.3■■■■□ 3.4
SSSCA1-207ENST00000533115 MORF4L1Q9UBU8 362 aa36.3■■■■□ 3.4
SSSCA1-207ENST00000533115 ZMYM1Q5SVZ6 1142 aa36.29■■■■□ 3.4
SSSCA1-207ENST00000533115 SEC62Q99442 399 aaKnown RBP36.29■■■■□ 3.4
SSSCA1-207ENST00000533115 GABRQQ9UN88 632 aa36.29■■■■□ 3.4
SSSCA1-207ENST00000533115 A0A1W2PRG0 241 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 POTEFA5A3E0 1075 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 USP17L15C9J2P7 530 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 USP17L13C9JLJ4 530 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 USP17L11C9JVI0 530 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 USP17L18D6R9N7 530 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 USP17L22D6RA61 530 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 USP17L17D6RBQ6 530 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 USP17L19D6RCP7 530 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 USP17L20D6RJB6 530 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 VCAM1P19320 739 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 USP17L24Q0WX57 530 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 COA7Q96BR5 231 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 EVI5LQ96CN4 794 aa36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 EPB41L4AQ9HCS5 686 aaPredicted RBP36.27■■■■□ 3.4
SSSCA1-207ENST00000533115 PATL2C9JE40 543 aaKnown RBP36.26■■■■□ 3.4
SSSCA1-207ENST00000533115 APPP05067 770 aa36.26■■■■□ 3.4
SSSCA1-207ENST00000533115 GRK4P32298 578 aa36.26■■■■□ 3.4
SSSCA1-207ENST00000533115 GTF3C2Q8WUA4 911 aaPredicted RBP36.26■■■■□ 3.4
SSSCA1-207ENST00000533115 TMEM106CQ9BVX2 250 aa36.26■■■■□ 3.4
SSSCA1-207ENST00000533115 TDO2P48775 406 aa36.25■■■■□ 3.39
SSSCA1-207ENST00000533115 FLT3LGP49771 235 aa36.25■■■■□ 3.39
SSSCA1-207ENST00000533115 CATSPERGQ6ZRH7 1159 aa36.25■■■■□ 3.39
SSSCA1-207ENST00000533115 CHD1LQ86WJ1 897 aa36.25■■■■□ 3.39
SSSCA1-207ENST00000533115 RBBP6Q7Z6E9 1792 aaKnown RBP36.25■■■■□ 3.39
SSSCA1-207ENST00000533115 MINDY4BA8MYZ0 360 aa36.24■■■■□ 3.39
SSSCA1-207ENST00000533115 NUCB1Q02818 461 aa36.24■■■■□ 3.39
SSSCA1-207ENST00000533115 GPRC5AQ8NFJ5 357 aa36.24■■■■□ 3.39
SSSCA1-207ENST00000533115 TXNRD2Q9NNW7 524 aa36.24■■■■□ 3.39
SSSCA1-207ENST00000533115 RBPJLQ9UBG7 517 aa36.24■■■■□ 3.39
SSSCA1-207ENST00000533115 KIAA0100Q14667 2235 aaKnown RBP36.23■■■■□ 3.39
SSSCA1-207ENST00000533115 ICA1Q05084 483 aa36.23■■■■□ 3.39
SSSCA1-207ENST00000533115 IFNL3Q8IZI9 196 aa36.23■■■■□ 3.39
SSSCA1-207ENST00000533115 PEX10O60683 326 aa36.22■■■■□ 3.39
SSSCA1-207ENST00000533115 MYCP01106 439 aaPredicted RBP36.22■■■■□ 3.39
SSSCA1-207ENST00000533115 CLEC10AQ8IUN9 316 aa36.22■■■■□ 3.39
SSSCA1-207ENST00000533115 SIAH1Q8IUQ4 282 aa36.22■■■■□ 3.39
SSSCA1-207ENST00000533115 SLAIN1Q8ND83 568 aa36.22■■■■□ 3.39
SSSCA1-207ENST00000533115 RPAP3Q9H6T3 665 aaPredicted RBP36.22■■■■□ 3.39
SSSCA1-207ENST00000533115 ARHGEF10LQ9HCE6 1279 aa36.22■■■■□ 3.39
SSSCA1-207ENST00000533115 ROBO3Q96MS0 1386 aa36.22■■■■□ 3.39
SSSCA1-207ENST00000533115 TNRC18O15417 2968 aaPredicted RBP36.21■■■■□ 3.39
SSSCA1-207ENST00000533115 IRF5Q13568 498 aa36.21■■■■□ 3.39
SSSCA1-207ENST00000533115 NACAP1Q9BZK3 213 aa36.21■■■■□ 3.39
SSSCA1-207ENST00000533115 DOCK3Q8IZD9 2030 aa36.2■■■■□ 3.39
SSSCA1-207ENST00000533115 ADCY3O60266 1144 aa36.2■■■■□ 3.39
SSSCA1-207ENST00000533115 POTEEQ6S8J3 1075 aa36.2■■■■□ 3.39
SSSCA1-207ENST00000533115 PAGR1Q9BTK6 254 aa36.2■■■■□ 3.39
SSSCA1-207ENST00000533115 TMX2Q9Y320 296 aa36.2■■■■□ 3.39
SSSCA1-207ENST00000533115 BRCA2P51587 3418 aa36.2■■■■□ 3.38
SSSCA1-207ENST00000533115 ERVK-9P63128 1117 aa36.19■■■■□ 3.38
SSSCA1-207ENST00000533115 ERVK-24P63145 666 aa36.19■■■■□ 3.38
SSSCA1-207ENST00000533115 STK11IPQ8N1F8 1099 aa36.19■■■■□ 3.38
SSSCA1-207ENST00000533115 SH2D4AQ9H788 454 aa36.19■■■■□ 3.38
SSSCA1-207ENST00000533115 KANSL2Q9H9L4 492 aa36.19■■■■□ 3.38
SSSCA1-207ENST00000533115 MKNK2Q9HBH9 465 aa36.19■■■■□ 3.38
SSSCA1-207ENST00000533115 Q3C1V9 767 aa36.18■■■■□ 3.38
SSSCA1-207ENST00000533115 BIN2Q9UBW5 565 aaPredicted RBP36.18■■■■□ 3.38
SSSCA1-207ENST00000533115 RABGAP1Q9Y3P9 1069 aa36.18■■■■□ 3.38
SSSCA1-207ENST00000533115 EN2P19622 333 aaPredicted RBP36.17■■■■□ 3.38
SSSCA1-207ENST00000533115 RASA1P20936 1047 aa36.17■■■■□ 3.38
SSSCA1-207ENST00000533115 IRX6P78412 446 aaPredicted RBP36.17■■■■□ 3.38
SSSCA1-207ENST00000533115 TICAM2Q86XR7 235 aa36.17■■■■□ 3.38
SSSCA1-207ENST00000533115 PLEKHM2Q8IWE5 1019 aa36.17■■■■□ 3.38
SSSCA1-207ENST00000533115 PXYLP1Q8TE99 480 aa36.17■■■■□ 3.38
SSSCA1-207ENST00000533115 UBXN2AP68543 259 aa36.16■■■■□ 3.38
SSSCA1-207ENST00000533115 MTFR1Q15390 333 aa36.16■■■■□ 3.38
SSSCA1-207ENST00000533115 KIAA1755Q5JYT7 1200 aa36.16■■■■□ 3.38
SSSCA1-207ENST00000533115 LBX2Q6XYB7 198 aa36.16■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms