RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 BAG2O95816 211 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 HACE1Q8IYU2 909 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 PPP4R1Q8TF05 950 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 CABS1Q96KC9 395 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 CD109Q6YHK3 1445 aa16.19■□□□□ 0.18
LRRK1-207ENST00000531270 P4HA1P13674 534 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 KRT24Q2M2I5 525 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 CCDC38Q502W7 563 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 DENND2CQ68D51 928 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 TYW1BQ6NUM6 668 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 PSPC1Q8WXF1 523 aaKnown RBP16.18■□□□□ 0.18
LRRK1-207ENST00000531270 HVCN1Q96D96 273 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 HELLSQ9NRZ9 838 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 OGFRQ9NZT2 677 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 NPHP3Q7Z494 1330 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 DTNBO60941 627 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 CYP2J2P51589 502 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 RPS6KA1Q15418 735 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 SFMBT2Q5VUG0 894 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 DEPTORQ8TB45 409 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 IL16Q14005 1332 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 FANCCQ00597 558 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 MAPKAPK5Q8IW41 473 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 FAM193BQ96PV7 902 aaPredicted RBP16.18■□□□□ 0.18
LRRK1-207ENST00000531270 ABCB4P21439 1286 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 U2AF1L4Q8WU68 220 aaKnown RBP16.18■□□□□ 0.18
LRRK1-207ENST00000531270 NELFBQ8WX92 580 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 SPECC1L-ADORA2AF8WAN1 911 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 VPS41P49754 854 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 PDZD8Q8NEN9 1154 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 CXorf38Q8TB03 319 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 NLRC4Q9NPP4 1024 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 IRAK4Q9NWZ3 460 aa16.18■□□□□ 0.18
LRRK1-207ENST00000531270 TUBBP07437 444 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 CDR2Q01850 454 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 NONOQ15233 471 aaKnown RBP eCLIP16.17■□□□□ 0.18
LRRK1-207ENST00000531270 ZNF594Q96JF6 807 aaPredicted RBP16.17■□□□□ 0.18
LRRK1-207ENST00000531270 SLF1Q9BQI6 1058 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 MLXIPQ9HAP2 919 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 PCDHB13Q9Y5F0 798 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 TESPA1A2RU30 521 aaPredicted RBP16.17■□□□□ 0.18
LRRK1-207ENST00000531270 GUCY2FP51841 1108 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 RUFY4Q6ZNE9 571 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 PLCH2O75038 1416 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 CABP7Q86V35 215 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 NME8Q8N427 588 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 VCX3AQ9NNX9 186 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 FAM207AQ9NSI2 230 aaPredicted RBP16.17■□□□□ 0.18
LRRK1-207ENST00000531270 MX2P20592 715 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 STX2P32856 288 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 BANK1Q8NDB2 785 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 HDAC11Q96DB2 347 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 STAM2O75886 525 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 TRIM68Q6AZZ1 485 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 SND1Q7KZF4 910 aaKnown RBP eCLIP16.17■□□□□ 0.18
LRRK1-207ENST00000531270 SYCE1Q8N0S2 351 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 PHKBQ93100 1093 aa16.17■□□□□ 0.18
LRRK1-207ENST00000531270 MRPL46Q9H2W6 279 aaKnown RBP16.17■□□□□ 0.18
LRRK1-207ENST00000531270 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 NR1I2O75469 434 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 RPS6KB1P23443 525 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 RRAGAQ7L523 313 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 CCDC13Q8IYE1 715 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 FAM71BQ8TC56 605 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 LSM14BQ9BX40 385 aaKnown RBP16.16■□□□□ 0.18
LRRK1-207ENST00000531270 SPC25Q9HBM1 224 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 RAB20Q9NX57 234 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 BAG5Q9UL15 447 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 CEP85Q6P2H3 762 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 TGFBRAP1Q8WUH2 860 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 BAIAP2L1Q9UHR4 511 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 PALM3A6NDB9 673 aaPredicted RBP16.16■□□□□ 0.18
LRRK1-207ENST00000531270 H0YIN7 160 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
LRRK1-207ENST00000531270 DIS3L2Q8IYB7 885 aaKnown RBP16.16■□□□□ 0.18
LRRK1-207ENST00000531270 SPDL1Q96EA4 605 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 NUP58Q9BVL2 599 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 PLCB1Q9NQ66 1216 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 OPHN1O60890 802 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 FLOT1O75955 427 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 KRT71Q3SY84 523 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 KCNJ14Q9UNX9 436 aa16.16■□□□□ 0.18
LRRK1-207ENST00000531270 PUM3Q15397 648 aaKnown RBP16.15■□□□□ 0.18
LRRK1-207ENST00000531270 TSPYL2Q9H2G4 693 aaPredicted RBP16.15■□□□□ 0.18
LRRK1-207ENST00000531270 SMYD2Q9NRG4 433 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 TNNQ9UQP3 1299 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 NUCKS1Q9H1E3 243 aaKnown RBP16.15■□□□□ 0.18
LRRK1-207ENST00000531270 KIF9Q9HAQ2 790 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 CHMLP26374 656 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 CLCN1P35523 988 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 PAK2Q13177 524 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 MUM1Q2TAK8 710 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 NLRX1Q86UT6 975 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 MCUQ8NE86 351 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 NSD2O96028 1365 aa16.15■□□□□ 0.18
LRRK1-207ENST00000531270 TROVE2P10155 538 aaKnown RBP eCLIP16.15■□□□□ 0.18
LRRK1-207ENST00000531270 ATF7P17544 494 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms