RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	NAPB	Q9H115	298 aa		9.25	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ZCCHC17	Q9NP64	241 aa	Known RBP	9.25	□□□□□ -0.93
MS4A6A-208	ENST00000528851	MYO5A	Q9Y4I1	1855 aa	Known RBP	9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CCL15-CCL14	A0A0B4J2E2	113 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851		A0A0D9SFI3	127 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	C19orf81	C9J6K1	198 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	SLC3A2	P08195	630 aa	Known RBP	9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CYP2D6	P10635	497 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	HSPD1	P10809	573 aa	Known RBP	9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CHML	P26374	656 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	SHMT1	P34896	483 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CTCF	P49711	727 aa	Predicted RBP	9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CCL15	Q16663	113 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ABCB5	Q2M3G0	1257 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	BMP2KL	Q5H9B9	411 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CWC27	Q6UX04	472 aa	Known RBP	9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CCDC129	Q6ZRS4	1044 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ZNF280C	Q8ND82	737 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CCDC171	Q6TFL3	1326 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	MINDY4B	A8MYZ0	360 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	SLC4A8	Q2Y0W8	1093 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	SH3D19	Q5HYK7	790 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ANKRD23	Q86SG2	305 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	DYNLL2	Q96FJ2	89 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	PTPN18	Q99952	460 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	MKNK2	Q9HBH9	465 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ANAPC4	Q9UJX5	808 aa		9.24	□□□□□ -0.93
MS4A6A-208	ENST00000528851		A0A0G2JLL6	359 aa	Predicted RBP	9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	USP17L10	C9JJH3	530 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	TRPA1	O75762	1119 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	FGA	P02671	866 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	JAG1	P78504	1218 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	PDE4B	Q07343	736 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	SPP2	Q13103	211 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	NOM1	Q5C9Z4	860 aa	Known RBP	9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	PRRT2	Q7Z6L0	340 aa	Predicted RBP	9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ZNF444	Q8N0Y2	327 aa	Predicted RBP	9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	BRI3BP	Q8WY22	251 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	DSCC1	Q9BVC3	393 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ZSWIM6	Q9HCJ5	1215 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CTNNA3	Q9UI47	895 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ZBTB21	Q9ULJ3	1066 aa		9.23	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ZMYM6	O95789	1325 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	RAD50	Q92878	1312 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	CYP2D7	A0A087X1C5	515 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	FOXN1	O15353	648 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	GDF11	O95390	407 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	GH2	P01242	217 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	NT5C2	P49902	561 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	BACE1	P56817	501 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	PPARA	Q07869	468 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	VPS53	Q5VIR6	699 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	TMEM179	Q6ZVK1	233 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ZNF589	Q86UQ0	364 aa	Predicted RBP	9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	PRDM10	Q9NQV6	1147 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	SLC45A1	Q9Y2W3	748 aa		9.22	□□□□□ -0.93
MS4A6A-208	ENST00000528851	BTBD19	C9JJ37	291 aa		9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	IGF2BP3	O00425	579 aa	Known RBP eCLIP	9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	FOXP2	O15409	715 aa		9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	FGR	P09769	529 aa		9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	PC	P11498	1178 aa	Known RBP	9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	GUCY1A2	P33402	732 aa		9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	PDAP1	Q13442	181 aa	Known RBP	9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	MOGS	Q13724	837 aa		9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	PROCA1	Q8NCQ7	364 aa	Predicted RBP	9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	KANSL2	Q9H9L4	492 aa		9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ZFYVE28	Q9HCC9	887 aa		9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	ROBO3	Q96MS0	1386 aa		9.21	□□□□□ -0.93
MS4A6A-208	ENST00000528851	AK9	Q5TCS8	1911 aa		9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	MPHOSPH10	O00566	681 aa	Known RBP	9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ZNF213	O14771	459 aa		9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SGSM2	O43147	1006 aa		9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TBC1D8	O95759	1140 aa		9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	HSPA8	P11142	646 aa	Known RBP	9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP14	P54578	494 aa		9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	PABPC4	Q13310	644 aa	Known RBP eCLIP	9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SEPT2	Q15019	361 aa		9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	RAB3GAP1	Q15042	981 aa		9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L2	Q6R6M4	530 aa		9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TMOD4	Q9NZQ9	345 aa		9.21	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TRIM75P	A6NK02	468 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SMIM22	K7EJ46	135 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	PDHX	O00330	501 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	AKR1B1	P15121	316 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	RASA1	P20936	1047 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	PPP4R3B	Q5MIZ7	849 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	GPAT2	Q6NUI2	795 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CASC1	Q6TDU7	716 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CCDC84	Q86UT8	332 aa	Predicted RBP	9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ZNF687	Q8N1G0	1237 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	FAM43A	Q8N2R8	423 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SLC44A5	Q8NCS7	719 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	C12orf42	Q96LP6	360 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	KIAA1683	Q9H0B3	1180 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	AGTPBP1	Q9UPW5	1226 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	THSD7B	Q9C0I4	1608 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	FOCAD	Q5VW36	1801 aa		9.2	□□□□□ -0.94
MS4A6A-208	ENST00000528851	GPR25	O00155	361 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ORC4	O43929	436 aa		9.19	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms