RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 M0R2C6 588 aa18.64■□□□□ 0.57
CAPN1-213ENST00000527897 APPP05067 770 aa18.64■□□□□ 0.57
CAPN1-213ENST00000527897 GCLCP48506 637 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-213ENST00000527897 AAMPQ13685 434 aa18.64■□□□□ 0.57
CAPN1-213ENST00000527897 FAM110CQ1W6H9 321 aa18.64■□□□□ 0.57
CAPN1-213ENST00000527897 C12orf60Q5U649 245 aa18.64■□□□□ 0.57
CAPN1-213ENST00000527897 CTR9Q6PD62 1173 aa18.64■□□□□ 0.57
CAPN1-213ENST00000527897 P2RX7Q99572 595 aaKnown RBP18.64■□□□□ 0.57
CAPN1-213ENST00000527897 LNPKQ9C0E8 428 aa18.64■□□□□ 0.57
CAPN1-213ENST00000527897 BIN2Q9UBW5 565 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-213ENST00000527897 GABRQQ9UN88 632 aa18.64■□□□□ 0.57
CAPN1-213ENST00000527897 GPAA1O43292 621 aa18.63■□□□□ 0.57
CAPN1-213ENST00000527897 GUCY1A2P33402 732 aa18.63■□□□□ 0.57
CAPN1-213ENST00000527897 IRX6P78412 446 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-213ENST00000527897 ZNF333Q96JL9 665 aa18.63■□□□□ 0.57
CAPN1-213ENST00000527897 TMEM106CQ9BVX2 250 aa18.63■□□□□ 0.57
CAPN1-213ENST00000527897 MINDY4BA8MYZ0 360 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 PEX10O60683 326 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 AKR1B1P15121 316 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 HOXA7P31268 230 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-213ENST00000527897 TDO2P48775 406 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 CDK8P49336 464 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 USP14P54578 494 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 HERVK_113P62684 666 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 TMEM179Q6ZVK1 233 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 COA7Q96BR5 231 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 SEC62Q99442 399 aaKnown RBP18.62■□□□□ 0.57
CAPN1-213ENST00000527897 PAGR1Q9BTK6 254 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 ARPP21Q9UBL0 812 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-213ENST00000527897 SALL3Q9BXA9 1300 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 BRCA2P51587 3418 aa18.62■□□□□ 0.57
CAPN1-213ENST00000527897 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
CAPN1-213ENST00000527897 GSG1L2A8MUP6 293 aa18.61■□□□□ 0.57
CAPN1-213ENST00000527897 IGHDP01880 384 aa18.61■□□□□ 0.57
CAPN1-213ENST00000527897 GRK4P32298 578 aa18.61■□□□□ 0.57
CAPN1-213ENST00000527897 PDE1AP54750 535 aa18.61■□□□□ 0.57
CAPN1-213ENST00000527897 ATP2B2Q01814 1243 aa18.61■□□□□ 0.57
CAPN1-213ENST00000527897 C16orf86Q6ZW13 317 aa18.61■□□□□ 0.57
CAPN1-213ENST00000527897 CLEC10AQ8IUN9 316 aa18.61■□□□□ 0.57
CAPN1-213ENST00000527897 KIAA1683Q9H0B3 1180 aa18.61■□□□□ 0.57
CAPN1-213ENST00000527897 DOCK3Q8IZD9 2030 aa18.61■□□□□ 0.57
CAPN1-213ENST00000527897 USP17L15C9J2P7 530 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 USP17L13C9JLJ4 530 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 USP17L11C9JVI0 530 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 USP17L18D6R9N7 530 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 USP17L22D6RA61 530 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 USP17L17D6RBQ6 530 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 USP17L19D6RCP7 530 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 USP17L20D6RJB6 530 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 GNAT2P19087 354 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 VCAM1P19320 739 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 FLT3LGP49771 235 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 USP17L24Q0WX57 530 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 C12orf42Q96LP6 360 aa18.6■□□□□ 0.57
CAPN1-213ENST00000527897 RPAP3Q9H6T3 665 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-213ENST00000527897 A0A1W2PRG0 241 aa18.59■□□□□ 0.57
CAPN1-213ENST00000527897 EN2P19622 333 aaPredicted RBP18.59■□□□□ 0.57
CAPN1-213ENST00000527897 ICA1Q05084 483 aa18.59■□□□□ 0.57
CAPN1-213ENST00000527897 CCAR1Q8IX12 1150 aaKnown RBP18.59■□□□□ 0.57
CAPN1-213ENST00000527897 GPRC5AQ8NFJ5 357 aa18.59■□□□□ 0.57
CAPN1-213ENST00000527897 CCDC17Q96LX7 622 aa18.59■□□□□ 0.57
CAPN1-213ENST00000527897 ARHGEF10LQ9HCE6 1279 aa18.59■□□□□ 0.57
CAPN1-213ENST00000527897 EPB41L4AQ9HCS5 686 aaPredicted RBP18.59■□□□□ 0.57
CAPN1-213ENST00000527897 TXNRD2Q9NNW7 524 aa18.59■□□□□ 0.57
CAPN1-213ENST00000527897 STAP2Q9UGK3 403 aa18.59■□□□□ 0.57
CAPN1-213ENST00000527897 TRIM6-TRIM34B2RNG4 842 aa18.58■□□□□ 0.56
CAPN1-213ENST00000527897 ADCY3O60266 1144 aa18.58■□□□□ 0.56
CAPN1-213ENST00000527897 ELNP15502 786 aa18.58■□□□□ 0.56
CAPN1-213ENST00000527897 MTFR1Q15390 333 aa18.58■□□□□ 0.56
CAPN1-213ENST00000527897 ZMYM1Q5SVZ6 1142 aa18.58■□□□□ 0.56
CAPN1-213ENST00000527897 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
CAPN1-213ENST00000527897 SMC5Q8IY18 1101 aa18.58■□□□□ 0.56
CAPN1-213ENST00000527897 EVI5LQ96CN4 794 aa18.58■□□□□ 0.56
CAPN1-213ENST00000527897 MKNK2Q9HBH9 465 aa18.58■□□□□ 0.56
CAPN1-213ENST00000527897 CWC22Q9HCG8 908 aaKnown RBP18.58■□□□□ 0.56
CAPN1-213ENST00000527897 MKI67P46013 3256 aaKnown RBP18.57■□□□□ 0.56
CAPN1-213ENST00000527897 PATL2C9JE40 543 aaKnown RBP18.57■□□□□ 0.56
CAPN1-213ENST00000527897 RAD21O60216 631 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 SBK1Q52WX2 424 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 CATSPERGQ6ZRH7 1159 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 CCDC129Q6ZRS4 1044 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 SPICE1Q8N0Z3 855 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 SLAIN1Q8ND83 568 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 TANGO6Q9C0B7 1094 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 RBPJLQ9UBG7 517 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 MORF4L1Q9UBU8 362 aa18.57■□□□□ 0.56
CAPN1-213ENST00000527897 RBBP6Q7Z6E9 1792 aaKnown RBP18.57■□□□□ 0.56
CAPN1-213ENST00000527897 ERVK-9P63128 1117 aa18.56■□□□□ 0.56
CAPN1-213ENST00000527897 ERVK-24P63145 666 aa18.56■□□□□ 0.56
CAPN1-213ENST00000527897 UBXN2AP68543 259 aa18.56■□□□□ 0.56
CAPN1-213ENST00000527897 WDR78Q5VTH9 848 aa18.56■□□□□ 0.56
CAPN1-213ENST00000527897 IFNL3Q8IZI9 196 aa18.56■□□□□ 0.56
CAPN1-213ENST00000527897 GTF3C2Q8WUA4 911 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-213ENST00000527897 RILPL2Q969X0 211 aa18.56■□□□□ 0.56
CAPN1-213ENST00000527897 NAPBQ9H115 298 aa18.56■□□□□ 0.56
CAPN1-213ENST00000527897 SH2D4AQ9H788 454 aa18.56■□□□□ 0.56
CAPN1-213ENST00000527897 PRDM1O75626 825 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms