RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 FAM110CQ1W6H9 321 aa16.14■□□□□ 0.17
USH1C-203ENST00000526181 POTEEQ6S8J3 1075 aa16.14■□□□□ 0.17
USH1C-203ENST00000526181 DDRGK1Q96HY6 314 aa16.14■□□□□ 0.17
USH1C-203ENST00000526181 KIAA1683Q9H0B3 1180 aa16.14■□□□□ 0.17
USH1C-203ENST00000526181 EPB41L4AQ9HCS5 686 aaPredicted RBP16.14■□□□□ 0.17
USH1C-203ENST00000526181 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
USH1C-203ENST00000526181 ZFYP08048 801 aaPredicted RBP16.13■□□□□ 0.17
USH1C-203ENST00000526181 HOXD10P28358 340 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 GCLCP48506 637 aaPredicted RBP16.13■□□□□ 0.17
USH1C-203ENST00000526181 CDK8P49336 464 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 HERVK_113P62684 666 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 AAMPQ13685 434 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 B4GALNT3Q6L9W6 998 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 C16orf86Q6ZW13 317 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 RAET1EQ8TD07 263 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 C12orf42Q96LP6 360 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 LNPKQ9C0E8 428 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 TXNRD2Q9NNW7 524 aa16.13■□□□□ 0.17
USH1C-203ENST00000526181 ARPP21Q9UBL0 812 aaPredicted RBP16.13■□□□□ 0.17
USH1C-203ENST00000526181 BAZ2AQ9UIF9 1905 aaKnown RBP16.13■□□□□ 0.17
USH1C-203ENST00000526181 VCAM1P19320 739 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 FLT3LGP49771 235 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 PDE1AP54750 535 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 IRX6P78412 446 aaPredicted RBP16.12■□□□□ 0.17
USH1C-203ENST00000526181 TMEM179Q6ZVK1 233 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 NBPF11Q86T75 865 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 SMC5Q8IY18 1101 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 STK11IPQ8N1F8 1099 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
USH1C-203ENST00000526181 MORF4L1Q9UBU8 362 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 STAP2Q9UGK3 403 aa16.12■□□□□ 0.17
USH1C-203ENST00000526181 EN2P19622 333 aaPredicted RBP16.11■□□□□ 0.17
USH1C-203ENST00000526181 GRK4P32298 578 aa16.11■□□□□ 0.17
USH1C-203ENST00000526181 USP14P54578 494 aa16.11■□□□□ 0.17
USH1C-203ENST00000526181 SIAH1Q8IUQ4 282 aa16.11■□□□□ 0.17
USH1C-203ENST00000526181 RBPJLQ9UBG7 517 aa16.11■□□□□ 0.17
USH1C-203ENST00000526181 MGAMO43451 1857 aa16.11■□□□□ 0.17
USH1C-203ENST00000526181 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
USH1C-203ENST00000526181 MINDY4BA8MYZ0 360 aa16.1■□□□□ 0.17
USH1C-203ENST00000526181 ELNP15502 786 aa16.1■□□□□ 0.17
USH1C-203ENST00000526181 MTFR1Q15390 333 aa16.1■□□□□ 0.17
USH1C-203ENST00000526181 Q3C1V9 767 aa16.1■□□□□ 0.17
USH1C-203ENST00000526181 SBK1Q52WX2 424 aa16.1■□□□□ 0.17
USH1C-203ENST00000526181 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
USH1C-203ENST00000526181 ZMYM1Q5SVZ6 1142 aa16.1■□□□□ 0.17
USH1C-203ENST00000526181 RPAP3Q9H6T3 665 aaPredicted RBP16.1■□□□□ 0.17
USH1C-203ENST00000526181 USP17L15C9J2P7 530 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 USP17L13C9JLJ4 530 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 USP17L11C9JVI0 530 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 USP17L18D6R9N7 530 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 USP17L22D6RA61 530 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 USP17L17D6RBQ6 530 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 USP17L19D6RCP7 530 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 USP17L20D6RJB6 530 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 APPP05067 770 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 TDO2P48775 406 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 ICA1Q05084 483 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 USP17L24Q0WX57 530 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
USH1C-203ENST00000526181 GIMAP6Q6P9H5 292 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 CATSPERGQ6ZRH7 1159 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 COA7Q96BR5 231 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 PAGR1Q9BTK6 254 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 TMEM106CQ9BVX2 250 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 TAOK2Q9UL54 1235 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 ROBO3Q96MS0 1386 aa16.09■□□□□ 0.17
USH1C-203ENST00000526181 PATL2C9JE40 543 aaKnown RBP16.08■□□□□ 0.16
USH1C-203ENST00000526181 ADCY3O60266 1144 aa16.08■□□□□ 0.16
USH1C-203ENST00000526181 CNMDO75829 334 aa16.08■□□□□ 0.16
USH1C-203ENST00000526181 GNAT2P19087 354 aa16.08■□□□□ 0.16
USH1C-203ENST00000526181 NUCB1Q02818 461 aa16.08■□□□□ 0.16
USH1C-203ENST00000526181 CHD1LQ86WJ1 897 aa16.08■□□□□ 0.16
USH1C-203ENST00000526181 IFNL3Q8IZI9 196 aa16.08■□□□□ 0.16
USH1C-203ENST00000526181 SLAIN1Q8ND83 568 aa16.08■□□□□ 0.16
USH1C-203ENST00000526181 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
USH1C-203ENST00000526181 CCDC17Q96LX7 622 aa16.08■□□□□ 0.16
USH1C-203ENST00000526181 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.08■□□□□ 0.16
USH1C-203ENST00000526181 FOXP2O15409 715 aa16.07■□□□□ 0.16
USH1C-203ENST00000526181 RASA1P20936 1047 aa16.07■□□□□ 0.16
USH1C-203ENST00000526181 ERVK-9P63128 1117 aa16.07■□□□□ 0.16
USH1C-203ENST00000526181 ERVK-24P63145 666 aa16.07■□□□□ 0.16
USH1C-203ENST00000526181 IRF5Q13568 498 aa16.07■□□□□ 0.16
USH1C-203ENST00000526181 SPICE1Q8N0Z3 855 aa16.07■□□□□ 0.16
USH1C-203ENST00000526181 PORCNQ9H237 461 aa16.07■□□□□ 0.16
USH1C-203ENST00000526181 BIN2Q9UBW5 565 aaPredicted RBP16.07■□□□□ 0.16
USH1C-203ENST00000526181 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
USH1C-203ENST00000526181 SPDYE16A6NNV3 312 aaPredicted RBP16.06■□□□□ 0.16
USH1C-203ENST00000526181 PRDM1O75626 825 aa16.06■□□□□ 0.16
USH1C-203ENST00000526181 INHAP05111 366 aa16.06■□□□□ 0.16
USH1C-203ENST00000526181 CCL5P13501 91 aa16.06■□□□□ 0.16
USH1C-203ENST00000526181 EEF2P13639 858 aaKnown RBP16.06■□□□□ 0.16
USH1C-203ENST00000526181 ATP2B2Q01814 1243 aa16.06■□□□□ 0.16
USH1C-203ENST00000526181 TANGO6Q9C0B7 1094 aa16.06■□□□□ 0.16
USH1C-203ENST00000526181 ARHGEF10LQ9HCE6 1279 aa16.06■□□□□ 0.16
USH1C-203ENST00000526181 BTBD7Q9P203 1132 aa16.06■□□□□ 0.16
USH1C-203ENST00000526181 GJD2Q9UKL4 321 aa16.06■□□□□ 0.16
USH1C-203ENST00000526181 MYH8P13535 1937 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms