RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 HSPA1BP0DMV9 641 aaKnown RBP5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 CYP2C8P10632 490 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 GTF2A2P52657 109 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 ICA1Q05084 483 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 PDE4BQ07343 736 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 SNAPC2Q13487 334 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 MOGSQ13724 837 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 ADCK5Q3MIX3 580 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 AKNAD1Q5T1N1 836 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 CREB3L3Q68CJ9 461 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 GPAT2Q6NUI2 795 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 MFSD6Q6ZSS7 791 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 TMEM179Q6ZVK1 233 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 RAB11FIP4Q86YS3 637 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 IFNL1Q8IU54 200 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 RASEFQ8IZ41 740 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 ZNF280CQ8ND82 737 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 CEP95Q96GE4 821 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 LRRC2Q9BYS8 371 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 SENP2Q9HC62 589 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 IL17RBQ9NRM6 502 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 EMILIN3Q9NT22 766 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 RNF186Q9NXI6 227 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 CPA4Q9UI42 421 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 CTNNA3Q9UI47 895 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 ANAPC4Q9UJX5 808 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 OTOFQ9HC10 1997 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 CDK5RAP2Q96SN8 1893 aa5.45□□□□□ -1.54
CHMP4A-202ENST00000524955 BAZ2AQ9UIF9 1905 aaKnown RBP5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 IGKV6D-41A0A0C4DH26 115 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 A0A0G2JLL6 359 aaPredicted RBP5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 MANSC4A6NHS7 340 aaPredicted RBP5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L10C9JJH3 530 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 CXCL11O14625 94 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 DTNBO60941 627 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 ZBTB48P10074 688 aaPredicted RBP5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 CETPP11597 493 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 MAP2K2P36507 400 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 SLC4A3P48751 1232 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 BACE1P56817 501 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 SNAP25P60880 206 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 CRHR2Q13324 411 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 NECTIN1Q15223 517 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 TAF1CQ15572 869 aaPredicted RBP5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 C8orf34Q49A92 452 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 FAM83BQ5T0W9 1011 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 PRRT2Q7Z6L0 340 aaPredicted RBP5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 NEDD1Q8NHV4 660 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 STAG1Q8WVM7 1258 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 CCDC17Q96LX7 622 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 TRPM7Q96QT4 1865 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 LARP6Q9BRS8 491 aaKnown RBP5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 AS3MTQ9HBK9 375 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 WBP1LQ9NX94 342 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 MTMR4Q9NYA4 1195 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 TMOD4Q9NZQ9 345 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 ZSWIM5Q9P217 1185 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 STX8Q9UNK0 236 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 KCNH4Q9UQ05 1017 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 MYH7P12883 1935 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 AK9Q5TCS8 1911 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 ZMYM6O95789 1325 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 FRMPD2Q68DX3 1309 aaPredicted RBP5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 FOCADQ5VW36 1801 aa5.44□□□□□ -1.54
CHMP4A-202ENST00000524955 MYH1P12882 1939 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 IFIT3O14879 490 aaKnown RBP5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 ORC4O43929 436 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 NDUFB10O96000 172 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 GOLGA8HP0CJ92 632 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 TAL1P17542 331 aaPredicted RBP5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 VCAM1P19320 739 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 MCCP23508 829 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 SLC16A2P36021 539 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 TM4SF4P48230 202 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 LBX1P52954 281 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 ANTXR2P58335 489 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 CAP1Q01518 475 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 MAP2K1Q02750 393 aaPredicted RBP5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 SREBF2Q12772 1141 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 RCSD1Q6JBY9 416 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L2Q6R6M4 530 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 POTEEQ6S8J3 1075 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 KCTD1Q719H9 257 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 RALYLQ86SE5 291 aaKnown RBP5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 TICAM2Q86XR7 235 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 JMYQ8N9B5 988 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 ESR2Q92731 530 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 JAKMIP1Q96N16 626 aaKnown RBP5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 P2RX7Q99572 595 aaKnown RBP5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 PAGR1Q9BTK6 254 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 MYL10Q9BUA6 226 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 BEGAINQ9BUH8 593 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 WDR18Q9BV38 432 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 USP26Q9BXU7 913 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 TANGO6Q9C0B7 1094 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 CPVLQ9H3G5 476 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 RNF41Q9H4P4 317 aaPredicted RBP5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 RPAP3Q9H6T3 665 aaPredicted RBP5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 KANSL2Q9H9L4 492 aa5.43□□□□□ -1.54
CHMP4A-202ENST00000524955 ZNF287Q9HBT7 754 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms