RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 USP17L2Q6R6M4 530 aa11.48□□□□□ -0.57
PTPN12-216ENST00000523952 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
PTPN12-216ENST00000523952 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
PTPN12-216ENST00000523952 USP6NLQ92738 828 aa11.48□□□□□ -0.57
PTPN12-216ENST00000523952 BADQ92934 168 aa11.48□□□□□ -0.57
PTPN12-216ENST00000523952 RNPC3Q96LT9 517 aaKnown RBP11.48□□□□□ -0.57
PTPN12-216ENST00000523952 LRP2BPQ9P2M1 347 aa11.48□□□□□ -0.57
PTPN12-216ENST00000523952 NAV1Q8NEY1 1877 aa11.48□□□□□ -0.57
PTPN12-216ENST00000523952 TTC28Q96AY4 2481 aa11.48□□□□□ -0.57
PTPN12-216ENST00000523952 PARP14Q460N5 1801 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 TMEM265A0A087WTH1 108 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 A0A1B0GUL7 405 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 SLC15A5A6NIM6 579 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 GDF11O95390 407 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 BAG3O95817 575 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 HLA-DOAP06340 250 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 PLCG2P16885 1265 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 RRP1BQ14684 758 aaKnown RBP11.47□□□□□ -0.57
PTPN12-216ENST00000523952 ZYXQ15942 572 aaKnown RBP11.47□□□□□ -0.57
PTPN12-216ENST00000523952 ATF7IPQ6VMQ6 1270 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 SLC39A5Q6ZMH5 540 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 DPP9Q86TI2 863 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 XAGE2Q96GT9 111 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 TTYH1Q9H313 450 aaPredicted RBP11.47□□□□□ -0.57
PTPN12-216ENST00000523952 GINM1Q9NU53 330 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 PA2G4Q9UQ80 394 aaKnown RBP11.47□□□□□ -0.57
PTPN12-216ENST00000523952 RABGAP1Q9Y3P9 1069 aa11.47□□□□□ -0.57
PTPN12-216ENST00000523952 SPTBN5Q9NRC6 3674 aaKnown RBP11.47□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L15C9J2P7 530 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L13C9JLJ4 530 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L11C9JVI0 530 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L18D6R9N7 530 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L22D6RA61 530 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L17D6RBQ6 530 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L19D6RCP7 530 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L20D6RJB6 530 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 PTPREP23469 700 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 CYP2C19P33261 490 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L24Q0WX57 530 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 TRIM60Q495X7 471 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 FOXP4Q8IVH2 680 aaPredicted RBP11.46□□□□□ -0.57
PTPN12-216ENST00000523952 ZNF579Q8NAF0 562 aaKnown RBP11.46□□□□□ -0.57
PTPN12-216ENST00000523952 SPATA5Q8NB90 893 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 SH3RF3Q8TEJ3 882 aaPredicted RBP11.46□□□□□ -0.57
PTPN12-216ENST00000523952 NSUN4Q96CB9 384 aaKnown RBP11.46□□□□□ -0.57
PTPN12-216ENST00000523952 FAM122AQ96E09 287 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 ZBTB21Q9ULJ3 1066 aa11.46□□□□□ -0.57
PTPN12-216ENST00000523952 NCOR1O75376 2440 aa11.46□□□□□ -0.58
PTPN12-216ENST00000523952 CDH23Q9H251 3354 aa11.45□□□□□ -0.58
PTPN12-216ENST00000523952 ANO1Q5XXA6 986 aa11.45□□□□□ -0.58
PTPN12-216ENST00000523952 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
PTPN12-216ENST00000523952 MAPKAPK5Q8IW41 473 aa11.45□□□□□ -0.58
PTPN12-216ENST00000523952 TGFBRAP1Q8WUH2 860 aa11.45□□□□□ -0.58
PTPN12-216ENST00000523952 PPM1EQ8WY54 764 aa11.45□□□□□ -0.58
PTPN12-216ENST00000523952 FERMT2Q96AC1 680 aa11.45□□□□□ -0.58
PTPN12-216ENST00000523952 GAS2L1Q99501 681 aaPredicted RBP11.45□□□□□ -0.58
PTPN12-216ENST00000523952 AATFQ9NY61 560 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTPN12-216ENST00000523952 SLC5A4Q9NY91 659 aa11.45□□□□□ -0.58
PTPN12-216ENST00000523952 FLRT1Q9NZU1 646 aa11.45□□□□□ -0.58
PTPN12-216ENST00000523952 A0A0G2JMZ2 1700 aa11.44□□□□□ -0.58
PTPN12-216ENST00000523952 RAG1P15918 1043 aa11.44□□□□□ -0.58
PTPN12-216ENST00000523952 USP14P54578 494 aa11.44□□□□□ -0.58
PTPN12-216ENST00000523952 TFCP2Q12800 502 aa11.44□□□□□ -0.58
PTPN12-216ENST00000523952 NAA16Q6N069 864 aaPredicted RBP11.44□□□□□ -0.58
PTPN12-216ENST00000523952 COPRSQ9NQ92 184 aa11.44□□□□□ -0.58
PTPN12-216ENST00000523952 PDLIM7Q9NR12 457 aa11.44□□□□□ -0.58
PTPN12-216ENST00000523952 HMG20BQ9P0W2 317 aa11.44□□□□□ -0.58
PTPN12-216ENST00000523952 MCM3APO60318 1980 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 ADCYAP1R1P41586 468 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 GRB14Q14449 540 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 RAB3GAP1Q15042 981 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 NPLOC4Q8TAT6 608 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 ZNF384Q8TF68 577 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 SSH1Q8WYL5 1049 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 EMILIN3Q9NT22 766 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 SAP30BPQ9UHR5 308 aaKnown RBP11.43□□□□□ -0.58
PTPN12-216ENST00000523952 PALD1Q9ULE6 856 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 TACC3Q9Y6A5 838 aa11.43□□□□□ -0.58
PTPN12-216ENST00000523952 FLT1P17948 1338 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.42□□□□□ -0.58
PTPN12-216ENST00000523952 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.42□□□□□ -0.58
PTPN12-216ENST00000523952 SEPT4O43236 478 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 GH2P01242 217 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 CLTBP09497 229 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 HOXC6P09630 235 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 UQCRFS1P1P0C7P4 283 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 CYBAP13498 195 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 DNAJB2P25686 324 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 PLA2G5P39877 138 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 FPGSQ05932 587 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 SHROOM1Q2M3G4 852 aaPredicted RBP11.42□□□□□ -0.58
PTPN12-216ENST00000523952 PI16Q6UXB8 463 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 CCDC129Q6ZRS4 1044 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 SH3RF1Q7Z6J0 888 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 CABP5Q9NP86 173 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 SMC4Q9NTJ3 1288 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 RAPGEFL1Q9UHV5 662 aa11.42□□□□□ -0.58
PTPN12-216ENST00000523952 TRIM43BA6NCK2 446 aa11.41□□□□□ -0.58
PTPN12-216ENST00000523952 POTEMA6NI47 508 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms