RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 CIAPIN1Q6FI81 312 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 SULT6B1Q6IMI4 303 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 USP17L2Q6R6M4 530 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 USP17L1Q7RTZ2 530 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 SYNE4Q8N205 404 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 STAG2Q8N3U4 1231 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 NAGPAQ9UK23 515 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 RNF112Q9ULX5 631 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 A0A087WZG4 1122 aa9.07□□□□□ -0.96
SDCBP-210ENST00000522843 ATP9BO43861 1147 aa9.07□□□□□ -0.96
SDCBP-210ENST00000522843 CCINQ13939 588 aa9.07□□□□□ -0.96
SDCBP-210ENST00000522843 FBXO11Q86XK2 927 aa9.07□□□□□ -0.96
SDCBP-210ENST00000522843 OGFOD1Q8N543 542 aa9.07□□□□□ -0.96
SDCBP-210ENST00000522843 TSEN2Q8NCE0 465 aaKnown RBP9.07□□□□□ -0.96
SDCBP-210ENST00000522843 GLMNQ92990 594 aa9.07□□□□□ -0.96
SDCBP-210ENST00000522843 IL13P35225 146 aa9.06□□□□□ -0.96
SDCBP-210ENST00000522843 ST5P78524 1137 aa9.06□□□□□ -0.96
SDCBP-210ENST00000522843 PCSK7Q16549 785 aa9.06□□□□□ -0.96
SDCBP-210ENST00000522843 SETDB2Q96T68 719 aa9.06□□□□□ -0.96
SDCBP-210ENST00000522843 C2orf49Q9BVC5 232 aaPredicted RBP9.06□□□□□ -0.96
SDCBP-210ENST00000522843 RBM19Q9Y4C8 960 aaKnown RBP9.06□□□□□ -0.96
SDCBP-210ENST00000522843 MKI67P46013 3256 aaKnown RBP9.05□□□□□ -0.96
SDCBP-210ENST00000522843 BTBD11A6QL63 1104 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 CELF2O95319 508 aaKnown RBP9.05□□□□□ -0.96
SDCBP-210ENST00000522843 A1BGP04217 495 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 NPR1P16066 1061 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 NFKB1P19838 968 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 IL6STP40189 918 aaPredicted RBP9.05□□□□□ -0.96
SDCBP-210ENST00000522843 IREB2P48200 963 aaKnown RBP9.05□□□□□ -0.96
SDCBP-210ENST00000522843 IER5Q5VY09 327 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 USP50Q70EL3 339 aaPredicted RBP9.05□□□□□ -0.96
SDCBP-210ENST00000522843 FAM35AQ86V20 835 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 RTKN2Q8IZC4 609 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 SIX5Q8N196 739 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 GAS2L2Q8NHY3 880 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 ZNF496Q96IT1 587 aaPredicted RBP9.05□□□□□ -0.96
SDCBP-210ENST00000522843 HHIPL1Q96JK4 782 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 PCGF6Q9BYE7 350 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 GOLGA2P5Q9HBQ8 144 aa9.05□□□□□ -0.96
SDCBP-210ENST00000522843 A6NJR5 290 aa9.04□□□□□ -0.96
SDCBP-210ENST00000522843 STARD3NLO95772 234 aa9.04□□□□□ -0.96
SDCBP-210ENST00000522843 CDCA8Q53HL2 280 aa9.04□□□□□ -0.96
SDCBP-210ENST00000522843 DLK2Q6UY11 383 aa9.04□□□□□ -0.96
SDCBP-210ENST00000522843 KRTAP19-1Q8IUB9 90 aa9.04□□□□□ -0.96
SDCBP-210ENST00000522843 PSMD1Q99460 953 aa9.04□□□□□ -0.96
SDCBP-210ENST00000522843 GLIS2Q9BZE0 524 aaPredicted RBP9.04□□□□□ -0.96
SDCBP-210ENST00000522843 TFIP11Q9UBB9 837 aaKnown RBP9.04□□□□□ -0.96
SDCBP-210ENST00000522843 HEG1Q9ULI3 1381 aa9.03□□□□□ -0.96
SDCBP-210ENST00000522843 FAM155AB1AL88 458 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-210ENST00000522843 NOS3P29474 1203 aa9.03□□□□□ -0.96
SDCBP-210ENST00000522843 LMOD1P29536 600 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-210ENST00000522843 PIP4K2AP48426 406 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-210ENST00000522843 GRIK5Q16478 980 aa9.03□□□□□ -0.96
SDCBP-210ENST00000522843 MTHFSDQ2M296 383 aaKnown RBP9.03□□□□□ -0.96
SDCBP-210ENST00000522843 IGF2-ASQ6U949 168 aa9.03□□□□□ -0.96
SDCBP-210ENST00000522843 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
SDCBP-210ENST00000522843 KRTAP9-9Q9BYP9 154 aa9.03□□□□□ -0.96
SDCBP-210ENST00000522843 KRTAP9-4Q9BYQ2 154 aa9.03□□□□□ -0.96
SDCBP-210ENST00000522843 FRRS1LQ9P0K9 344 aa9.03□□□□□ -0.96
SDCBP-210ENST00000522843 PGAP2Q9UHJ9 254 aa9.03□□□□□ -0.96
SDCBP-210ENST00000522843 DKK1O94907 266 aa9.02□□□□□ -0.97
SDCBP-210ENST00000522843 CPB1P15086 417 aa9.02□□□□□ -0.97
SDCBP-210ENST00000522843 EIF6P56537 245 aaKnown RBP9.02□□□□□ -0.97
SDCBP-210ENST00000522843 NBPF5PQ86XG9 351 aaPredicted RBP9.02□□□□□ -0.97
SDCBP-210ENST00000522843 JDP2Q8WYK2 163 aa9.02□□□□□ -0.97
SDCBP-210ENST00000522843 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
SDCBP-210ENST00000522843 SZT2Q5T011 3432 aa9.02□□□□□ -0.97
SDCBP-210ENST00000522843 SIPA1L3O60292 1781 aaPredicted RBP9.01□□□□□ -0.97
SDCBP-210ENST00000522843 TGFBR3LH3BV60 316 aa9.01□□□□□ -0.97
SDCBP-210ENST00000522843 NPHP1O15259 732 aa9.01□□□□□ -0.97
SDCBP-210ENST00000522843 KCNQ3O43525 872 aa9.01□□□□□ -0.97
SDCBP-210ENST00000522843 MAP3K6O95382 1288 aa9.01□□□□□ -0.97
SDCBP-210ENST00000522843 NOGQ13253 232 aa9.01□□□□□ -0.97
SDCBP-210ENST00000522843 RTN1Q16799 776 aa9.01□□□□□ -0.97
SDCBP-210ENST00000522843 HABP4Q5JVS0 413 aaKnown RBP9.01□□□□□ -0.97
SDCBP-210ENST00000522843 WFDC8Q8IUA0 241 aa9.01□□□□□ -0.97
SDCBP-210ENST00000522843 ZNF594Q96JF6 807 aaPredicted RBP9.01□□□□□ -0.97
SDCBP-210ENST00000522843 ADARB2Q9NS39 739 aaKnown RBP9.01□□□□□ -0.97
SDCBP-210ENST00000522843 GPRC5DQ9NZD1 345 aa9.01□□□□□ -0.97
SDCBP-210ENST00000522843 DMGDHQ9UI17 866 aaKnown RBP9.01□□□□□ -0.97
SDCBP-210ENST00000522843 ABCC12Q96J65 1359 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 PRAMEF22A3QJZ6 481 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 HMOX1P09601 288 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 EPB42P16452 691 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 CRY2Q49AN0 593 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 PERM1Q5SV97 790 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 MCTP1Q6DN14 999 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 ZNF790Q6PG37 636 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 ELMSAN1Q6PJG2 1045 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 PRR23CQ6ZRP0 262 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 IL17REQ8NFR9 667 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 TTC9Q92623 222 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 MEGF10Q96KG7 1140 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
SDCBP-210ENST00000522843 ZNF408Q9H9D4 720 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 RNF186Q9NXI6 227 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 SAGE1Q9NXZ1 904 aa9□□□□□ -0.97
SDCBP-210ENST00000522843 SHTN1A0MZ66 631 aa8.99□□□□□ -0.97
SDCBP-210ENST00000522843 FAM177BA6PVY3 158 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms