RNA–Protein interactions for RNA: ENST00000521562.5

PTK2-233, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-233	ENST00000521562	CDK8	P49336	464 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	PDE1A	P54750	535 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	FCGRT	P55899	365 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	IRX6	P78412	446 aa	Predicted RBP	11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	AAMP	Q13685	434 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	SLC9C1	Q4G0N8	1177 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	B4GALNT3	Q6L9W6	998 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	CLEC10A	Q8IUN9	316 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	ZNF333	Q96JL9	665 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	FSD1	Q9BTV5	496 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	LNPK	Q9C0E8	428 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	CABP5	Q9NP86	173 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	STAP2	Q9UGK3	403 aa		11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	KIAA0100	Q14667	2235 aa	Known RBP	11.45	□□□□□ -0.58
PTK2-233	ENST00000521562	ZFY	P08048	801 aa	Predicted RBP	11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	HERVK_113	P62684	666 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	IRX3	P78415	501 aa	Predicted RBP	11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	FAM110C	Q1W6H9	321 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	C16orf86	Q6ZW13	317 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	SIAH1	Q8IUQ4	282 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	SMC5	Q8IY18	1101 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	STK11IP	Q8N1F8	1099 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	C12orf42	Q96LP6	360 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	FEZ1	Q99689	392 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	KIAA1683	Q9H0B3	1180 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	RWDD1	Q9H446	243 aa	Predicted RBP	11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	TXNRD2	Q9NNW7	524 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	SWAP70	Q9UH65	585 aa		11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	GREB1L	Q9C091	1923 aa	Predicted RBP	11.44	□□□□□ -0.58
PTK2-233	ENST00000521562	VCAM1	P19320	739 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	EN2	P19622	333 aa	Predicted RBP	11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	GCLC	P48506	637 aa	Predicted RBP	11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	PRMT2	P55345	433 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	SBK1	Q52WX2	424 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	KIAA1755	Q5JYT7	1200 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	ZMYM1	Q5SVZ6	1142 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	CCDC129	Q6ZRS4	1044 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	RAET1E	Q8TD07	263 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	RBPJL	Q9UBG7	517 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	MORF4L1	Q9UBU8	362 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	RLF	Q13129	1914 aa		11.43	□□□□□ -0.58
PTK2-233	ENST00000521562	MINDY4B	A8MYZ0	360 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	TNPO2	O14787	897 aa	Known RBP	11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	FOXP2	O15409	715 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	HOXD10	P28358	340 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	FLT3LG	P49771	235 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	USP14	P54578	494 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	MTFR1	Q15390	333 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562		Q3C1V9	767 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	GIMAP6	Q6P9H5	292 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	CATSPERG	Q6ZRH7	1159 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	TMEM179	Q6ZVK1	233 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	NBPF11	Q86T75	865 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	AMOTL1	Q8IY63	956 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	DDRGK1	Q96HY6	314 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	PDE4DIP	Q5VU43	2346 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	PARP14	Q460N5	1801 aa		11.42	□□□□□ -0.58
PTK2-233	ENST00000521562	USP17L15	C9J2P7	530 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	PATL2	C9JE40	543 aa	Known RBP	11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	USP17L13	C9JLJ4	530 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	USP17L11	C9JVI0	530 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	USP17L18	D6R9N7	530 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	USP17L22	D6RA61	530 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	USP17L17	D6RBQ6	530 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	USP17L19	D6RCP7	530 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	USP17L20	D6RJB6	530 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	CNMD	O75829	334 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	APP	P05067	770 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	ELN	P15502	786 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	GRK4	P32298	578 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	NUCB1	Q02818	461 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	USP17L24	Q0WX57	530 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	CHD1L	Q86WJ1	897 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	IFNL3	Q8IZI9	196 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	PAGR1	Q9BTK6	254 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	TAOK2	Q9UL54	1235 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	ROBO3	Q96MS0	1386 aa		11.41	□□□□□ -0.58
PTK2-233	ENST00000521562	ADCY3	O60266	1144 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	GNAT2	P19087	354 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	RASA1	P20936	1047 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	TDO2	P48775	406 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	ERVK-9	P63128	1117 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	ERVK-24	P63145	666 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	ICA1	Q05084	483 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	VPS53	Q5VIR6	699 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	PLEKHM2	Q8IWE5	1019 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	GPRC5A	Q8NFJ5	357 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	EVI5L	Q96CN4	794 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	CCDC17	Q96LX7	622 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	FAM227B	Q96M60	508 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	PORCN	Q9H237	461 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	GJD2	Q9UKL4	321 aa		11.4	□□□□□ -0.58
PTK2-233	ENST00000521562	TMX2	Q9Y320	296 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms