RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PPFIBP1Q86W92 1011 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 DZIP1LQ8IYY4 767 aaKnown RBP5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 RNF214Q8ND24 703 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 THAP3Q8WTV1 239 aaPredicted RBP5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 PPP1R13LQ8WUF5 828 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 ACSBG1Q96GR2 724 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 TMEM87BQ96K49 555 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 USP26Q9BXU7 913 aa5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 R3HCC1Q9Y3T6 440 aaKnown RBP5.09□□□□□ -1.59
HMGN1P28-201ENST00000521340 FAM177BA6PVY3 158 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 F8W735 103 aaPredicted RBP5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 DDAH1O94760 285 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 PGRP06401 933 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 FAM153BP0C7A2 387 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 SLFN14P0C7P3 912 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 NCLP19338 710 aaKnown RBP5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 CCNFP41002 786 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 ID3Q02535 119 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 PDE4BQ07343 736 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 SLC10A6Q3KNW5 377 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 FOXB2Q5VYV0 432 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 SLC6A19Q695T7 634 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 NBPF11Q86T75 865 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 RPUSD2Q8IZ73 545 aaKnown RBP5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 TMEM130Q8N3G9 435 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 PHAXQ9H814 394 aaKnown RBP5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 AKTIPQ9H8T0 292 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 IFT57Q9NWB7 429 aa5.08□□□□□ -1.6
HMGN1P28-201ENST00000521340 KDM2BQ8NHM5 1336 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 C9IYK1 514 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 PPM1GO15355 546 aaPredicted RBP5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 SUSD5O60279 629 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 VIL1P09327 827 aaKnown RBP5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 DRD2P14416 443 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 POU3F3P20264 500 aaPredicted RBP5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 PMS1P54277 932 aaKnown RBP5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 GYS2P54840 703 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 SOX4Q06945 474 aaPredicted RBP5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 NCAPHQ15003 741 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 PTPROQ16827 1216 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 LONRF2Q1L5Z9 754 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 C16orf86Q6ZW13 317 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 ANKRD13AQ8IZ07 590 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 C2CD4AQ8NCU7 369 aaPredicted RBP5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 KISS1RQ969F8 398 aaPredicted RBP5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 ELMO3Q96BJ8 720 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 RNF112Q9ULX5 631 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 SLC12A7Q9Y666 1083 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 PTCH2Q9Y6C5 1203 aa5.07□□□□□ -1.6
HMGN1P28-201ENST00000521340 PRAMEF27A3QJZ7 478 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 CBFA2T2O43439 604 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 CDC45O75419 566 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 CST3P01034 146 aaPredicted RBP5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 ADH5P11766 374 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 MASP1P48740 699 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 AMPD3Q01432 767 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 TTLL4Q14679 1199 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 DUOXA2Q1HG44 320 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 MTERF2Q49AM1 385 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 DALRD3Q5D0E6 543 aaKnown RBP5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 KIAA1211LQ6NV74 962 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 VHLLQ6RSH7 139 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 Q6ZS46 218 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 HID1Q8IV36 788 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 ZBTB38Q8NAP3 1195 aaPredicted RBP5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 DNAJB8Q8NHS0 232 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 APPBP2Q92624 585 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 ISL2Q96A47 359 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 SPATA9Q9BWV2 254 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 MRPL18Q9H0U6 180 aaKnown RBP5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 PFDN2Q9UHV9 154 aa5.06□□□□□ -1.6
HMGN1P28-201ENST00000521340 PPP1R12AO14974 1030 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 SHOXO15266 292 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 CHMP4BP1P59074 171 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 IFRD2Q12894 506 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 AXDND1Q5T1B0 1012 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 DIEXFQ68CQ4 756 aaKnown RBP5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 SEZ6L2Q6UXD5 910 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 HOMER1Q86YM7 354 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 AGGF1Q8N302 714 aaeCLIP5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 BAHD1Q8TBE0 780 aaPredicted RBP5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 ZNF507Q8TCN5 953 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 STAG1Q8WVM7 1258 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 KIF2CQ99661 725 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 KLHL25Q9H0H3 589 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 EPN3Q9H201 632 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 PCDH12Q9NPG4 1184 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 ARHGEF4Q9NR80 690 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 SUCOQ9UBS9 1254 aaKnown RBP5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
HMGN1P28-201ENST00000521340 A0A1W2PQU0 124 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 FAM83GA6ND36 823 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 FSTP19883 344 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 ETF1P62495 437 aaKnown RBP5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 SLC7A5Q01650 507 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 SSRP1Q08945 709 aaKnown RBP5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 MLECQ14165 292 aa5.04□□□□□ -1.6
HMGN1P28-201ENST00000521340 ANKRD39Q53RE8 183 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms