RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 GSG1L2A8MUP6 293 aa16.94■□□□□ 0.3
VEGFA-221ENST00000520265 SMIM22K7EJ46 135 aa16.94■□□□□ 0.3
VEGFA-221ENST00000520265 AKR1B1P15121 316 aa16.94■□□□□ 0.3
VEGFA-221ENST00000520265 SH3D19Q5HYK7 790 aa16.94■□□□□ 0.3
VEGFA-221ENST00000520265 ZMYM1Q5SVZ6 1142 aa16.94■□□□□ 0.3
VEGFA-221ENST00000520265 SAMD1Q6SPF0 538 aaPredicted RBP16.94■□□□□ 0.3
VEGFA-221ENST00000520265 TMEM179Q6ZVK1 233 aa16.94■□□□□ 0.3
VEGFA-221ENST00000520265 ACER1Q8TDN7 264 aa16.94■□□□□ 0.3
VEGFA-221ENST00000520265 NAPBQ9H115 298 aa16.94■□□□□ 0.3
VEGFA-221ENST00000520265 ADGRA2Q96PE1 1338 aa16.94■□□□□ 0.3
VEGFA-221ENST00000520265 HOXD10P28358 340 aa16.93■□□□□ 0.3
VEGFA-221ENST00000520265 USP14P54578 494 aa16.93■□□□□ 0.3
VEGFA-221ENST00000520265 CAP1Q01518 475 aa16.93■□□□□ 0.3
VEGFA-221ENST00000520265 ICA1Q05084 483 aa16.93■□□□□ 0.3
VEGFA-221ENST00000520265 SLC9C1Q4G0N8 1177 aa16.93■□□□□ 0.3
VEGFA-221ENST00000520265 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
VEGFA-221ENST00000520265 CLEC10AQ8IUN9 316 aa16.93■□□□□ 0.3
VEGFA-221ENST00000520265 CCAR1Q8IX12 1150 aaKnown RBP16.93■□□□□ 0.3
VEGFA-221ENST00000520265 ARHGEF10LQ9HCE6 1279 aa16.93■□□□□ 0.3
VEGFA-221ENST00000520265 CWC22Q9HCG8 908 aaKnown RBP16.93■□□□□ 0.3
VEGFA-221ENST00000520265 PTCH2Q9Y6C5 1203 aa16.93■□□□□ 0.3
VEGFA-221ENST00000520265 PATL2C9JE40 543 aaKnown RBP16.92■□□□□ 0.3
VEGFA-221ENST00000520265 TNPO2O14787 897 aaKnown RBP16.92■□□□□ 0.3
VEGFA-221ENST00000520265 BCRP11274 1271 aa16.92■□□□□ 0.3
VEGFA-221ENST00000520265 PLEKHM2Q8IWE5 1019 aa16.92■□□□□ 0.3
VEGFA-221ENST00000520265 RAET1EQ8TD07 263 aa16.92■□□□□ 0.3
VEGFA-221ENST00000520265 TRIM47Q96LD4 638 aa16.92■□□□□ 0.3
VEGFA-221ENST00000520265 CCDC17Q96LX7 622 aa16.92■□□□□ 0.3
VEGFA-221ENST00000520265 PAGR1Q9BTK6 254 aa16.92■□□□□ 0.3
VEGFA-221ENST00000520265 EPB41L4AQ9HCS5 686 aaPredicted RBP16.92■□□□□ 0.3
VEGFA-221ENST00000520265 MYPNQ86TC9 1320 aa16.92■□□□□ 0.3
VEGFA-221ENST00000520265 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
VEGFA-221ENST00000520265 GUCY1A2P33402 732 aa16.91■□□□□ 0.3
VEGFA-221ENST00000520265 GCLCP48506 637 aaPredicted RBP16.91■□□□□ 0.3
VEGFA-221ENST00000520265 GIMAP6Q6P9H5 292 aa16.91■□□□□ 0.3
VEGFA-221ENST00000520265 IFNL3Q8IZI9 196 aa16.91■□□□□ 0.3
VEGFA-221ENST00000520265 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
VEGFA-221ENST00000520265 TANGO6Q9C0B7 1094 aa16.91■□□□□ 0.3
VEGFA-221ENST00000520265 EMILIN3Q9NT22 766 aa16.91■□□□□ 0.3
VEGFA-221ENST00000520265 BIN2Q9UBW5 565 aaPredicted RBP16.91■□□□□ 0.3
VEGFA-221ENST00000520265 GNRH1P01148 92 aa16.9■□□□□ 0.3
VEGFA-221ENST00000520265 VCAM1P19320 739 aa16.9■□□□□ 0.3
VEGFA-221ENST00000520265 HERVK_113P62684 666 aa16.9■□□□□ 0.3
VEGFA-221ENST00000520265 NBPF11Q86T75 865 aa16.9■□□□□ 0.3
VEGFA-221ENST00000520265 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
VEGFA-221ENST00000520265 RPAP3Q9H6T3 665 aaPredicted RBP16.9■□□□□ 0.3
VEGFA-221ENST00000520265 SH2D4AQ9H788 454 aa16.9■□□□□ 0.3
VEGFA-221ENST00000520265 ZNF287Q9HBT7 754 aa16.9■□□□□ 0.3
VEGFA-221ENST00000520265 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
VEGFA-221ENST00000520265 A0A0D9SFI3 127 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 USP17L15C9J2P7 530 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 USP17L13C9JLJ4 530 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 USP17L11C9JVI0 530 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 USP17L18D6R9N7 530 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 USP17L22D6RA61 530 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 USP17L17D6RBQ6 530 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 USP17L19D6RCP7 530 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 USP17L20D6RJB6 530 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 PRDM1O75626 825 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 CTGFP29279 349 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 PRKCZQ05513 592 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 USP17L24Q0WX57 530 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 NMIQ13287 307 aaPredicted RBP16.89■□□□□ 0.29
VEGFA-221ENST00000520265 FAM110CQ1W6H9 321 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 SBK1Q52WX2 424 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 WDR78Q5VTH9 848 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
VEGFA-221ENST00000520265 SPICE1Q8N0Z3 855 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 SH3TC2Q8TF17 1288 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 COA7Q96BR5 231 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 P2RX7Q99572 595 aaKnown RBP16.89■□□□□ 0.29
VEGFA-221ENST00000520265 HELLSQ9NRZ9 838 aa16.89■□□□□ 0.29
VEGFA-221ENST00000520265 PRMT2P55345 433 aa16.88■□□□□ 0.29
VEGFA-221ENST00000520265 PDE4BQ07343 736 aa16.88■□□□□ 0.29
VEGFA-221ENST00000520265 MCMDC2Q4G0Z9 681 aa16.88■□□□□ 0.29
VEGFA-221ENST00000520265 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
VEGFA-221ENST00000520265 SRRDQ9UH36 339 aa16.88■□□□□ 0.29
VEGFA-221ENST00000520265 ISY1Q9ULR0 285 aaKnown RBP16.88■□□□□ 0.29
VEGFA-221ENST00000520265 A0A1W2PRG0 241 aa16.87■□□□□ 0.29
VEGFA-221ENST00000520265 PEX10O60683 326 aa16.87■□□□□ 0.29
VEGFA-221ENST00000520265 EEF2P13639 858 aaKnown RBP16.87■□□□□ 0.29
VEGFA-221ENST00000520265 HOXA7P31268 230 aaPredicted RBP16.87■□□□□ 0.29
VEGFA-221ENST00000520265 PPARAQ07869 468 aa16.87■□□□□ 0.29
VEGFA-221ENST00000520265 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
VEGFA-221ENST00000520265 GPRC5AQ8NFJ5 357 aa16.87■□□□□ 0.29
VEGFA-221ENST00000520265 C12orf42Q96LP6 360 aa16.87■□□□□ 0.29
VEGFA-221ENST00000520265 KANSL2Q9H9L4 492 aa16.87■□□□□ 0.29
VEGFA-221ENST00000520265 MGAMO43451 1857 aa16.86■□□□□ 0.29
VEGFA-221ENST00000520265 TSPY3P0CV98 308 aa16.86■□□□□ 0.29
VEGFA-221ENST00000520265 TSPY8P0CW00 308 aa16.86■□□□□ 0.29
VEGFA-221ENST00000520265 RASA1P20936 1047 aa16.86■□□□□ 0.29
VEGFA-221ENST00000520265 CWC27Q6UX04 472 aaKnown RBP16.86■□□□□ 0.29
VEGFA-221ENST00000520265 GTF3C2Q8WUA4 911 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-221ENST00000520265 TMEM106CQ9BVX2 250 aa16.86■□□□□ 0.29
VEGFA-221ENST00000520265 GOPCQ9HD26 462 aa16.86■□□□□ 0.29
VEGFA-221ENST00000520265 GABRQQ9UN88 632 aa16.86■□□□□ 0.29
VEGFA-221ENST00000520265 ROBO3Q96MS0 1386 aa16.86■□□□□ 0.29
VEGFA-221ENST00000520265 SDSP20132 328 aa16.85■□□□□ 0.29
VEGFA-221ENST00000520265 PDE4AP27815 886 aa16.85■□□□□ 0.29
VEGFA-221ENST00000520265 GRK4P32298 578 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms