RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 ARHGAP39Q9C0H5 1083 aa22.32■■□□□ 1.16
FAM49B-208ENST00000518344 HELLSQ9NRZ9 838 aa22.32■■□□□ 1.16
FAM49B-208ENST00000518344 EMILIN3Q9NT22 766 aa22.32■■□□□ 1.16
FAM49B-208ENST00000518344 HPS5Q9UPZ3 1129 aa22.32■■□□□ 1.16
FAM49B-208ENST00000518344 BCRP11274 1271 aa22.31■■□□□ 1.16
FAM49B-208ENST00000518344 PDE4AP27815 886 aa22.31■■□□□ 1.16
FAM49B-208ENST00000518344 TMEM179Q6ZVK1 233 aa22.31■■□□□ 1.16
FAM49B-208ENST00000518344 CCDC17Q96LX7 622 aa22.31■■□□□ 1.16
FAM49B-208ENST00000518344 ASCC2Q9H1I8 757 aaPredicted RBP22.31■■□□□ 1.16
FAM49B-208ENST00000518344 MKNK2Q9HBH9 465 aa22.31■■□□□ 1.16
FAM49B-208ENST00000518344 USP14P54578 494 aa22.3■■□□□ 1.16
FAM49B-208ENST00000518344 IRX3P78415 501 aaPredicted RBP22.3■■□□□ 1.16
FAM49B-208ENST00000518344 NMIQ13287 307 aaPredicted RBP22.3■■□□□ 1.16
FAM49B-208ENST00000518344 NAPBQ9H115 298 aa22.3■■□□□ 1.16
FAM49B-208ENST00000518344 PTPN22Q9Y2R2 807 aa22.3■■□□□ 1.16
FAM49B-208ENST00000518344 A0A0D9SFI3 127 aa22.29■■□□□ 1.16
FAM49B-208ENST00000518344 FMNL1O95466 1100 aaPredicted RBP22.29■■□□□ 1.16
FAM49B-208ENST00000518344 PSMC4P43686 418 aa22.29■■□□□ 1.16
FAM49B-208ENST00000518344 MCMDC2Q4G0Z9 681 aa22.29■■□□□ 1.16
FAM49B-208ENST00000518344 TICAM2Q86XR7 235 aa22.29■■□□□ 1.16
FAM49B-208ENST00000518344 ANKRD13CQ8N6S4 541 aa22.29■■□□□ 1.16
FAM49B-208ENST00000518344 KIAA1683Q9H0B3 1180 aa22.29■■□□□ 1.16
FAM49B-208ENST00000518344 BAZ2AQ9UIF9 1905 aaKnown RBP22.28■■□□□ 1.16
FAM49B-208ENST00000518344 SDSP20132 328 aa22.28■■□□□ 1.16
FAM49B-208ENST00000518344 HOXA7P31268 230 aaPredicted RBP22.28■■□□□ 1.16
FAM49B-208ENST00000518344 ATP2B2Q01814 1243 aa22.27■■□□□ 1.16
FAM49B-208ENST00000518344 VPS53Q5VIR6 699 aa22.27■■□□□ 1.16
FAM49B-208ENST00000518344 CLEC10AQ8IUN9 316 aa22.27■■□□□ 1.16
FAM49B-208ENST00000518344 P2RX7Q99572 595 aaKnown RBP22.27■■□□□ 1.16
FAM49B-208ENST00000518344 PTPRFP10586 1907 aa22.26■■□□□ 1.15
FAM49B-208ENST00000518344 A0A1W2PRG0 241 aa22.26■■□□□ 1.15
FAM49B-208ENST00000518344 SLC3A2P08195 630 aaKnown RBP22.26■■□□□ 1.15
FAM49B-208ENST00000518344 RASA1P20936 1047 aa22.26■■□□□ 1.15
FAM49B-208ENST00000518344 CTGFP29279 349 aa22.26■■□□□ 1.15
FAM49B-208ENST00000518344 GCLCP48506 637 aaPredicted RBP22.26■■□□□ 1.15
FAM49B-208ENST00000518344 ICA1Q05084 483 aa22.26■■□□□ 1.15
FAM49B-208ENST00000518344 ZNF444Q8N0Y2 327 aaPredicted RBP22.26■■□□□ 1.15
FAM49B-208ENST00000518344 TRIM47Q96LD4 638 aa22.26■■□□□ 1.15
FAM49B-208ENST00000518344 C12orf42Q96LP6 360 aa22.26■■□□□ 1.15
FAM49B-208ENST00000518344 ZNF287Q9HBT7 754 aa22.26■■□□□ 1.15
FAM49B-208ENST00000518344 ARHGEF10LQ9HCE6 1279 aa22.26■■□□□ 1.15
FAM49B-208ENST00000518344 USP17L15C9J2P7 530 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 USP17L13C9JLJ4 530 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 USP17L11C9JVI0 530 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 USP17L18D6R9N7 530 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 USP17L22D6RA61 530 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 USP17L17D6RBQ6 530 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 USP17L19D6RCP7 530 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 USP17L20D6RJB6 530 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 PRDM1O75626 825 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 GNRH1P01148 92 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 FCGRTP55899 365 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 PPARAQ07869 468 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 USP17L24Q0WX57 530 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 SIAH1Q8IUQ4 282 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 KANSL2Q9H9L4 492 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 DIAPH3Q9NSV4 1193 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 ROBO3Q96MS0 1386 aa22.25■■□□□ 1.15
FAM49B-208ENST00000518344 FOXP2O15409 715 aa22.24■■□□□ 1.15
FAM49B-208ENST00000518344 VCAM1P19320 739 aa22.24■■□□□ 1.15
FAM49B-208ENST00000518344 HOXD10P28358 340 aa22.24■■□□□ 1.15
FAM49B-208ENST00000518344 CWC27Q6UX04 472 aaKnown RBP22.24■■□□□ 1.15
FAM49B-208ENST00000518344 ZNF589Q86UQ0 364 aaPredicted RBP22.24■■□□□ 1.15
FAM49B-208ENST00000518344 PTCH2Q9Y6C5 1203 aa22.24■■□□□ 1.15
FAM49B-208ENST00000518344 LOC285556D6RIA3 1793 aa22.24■■□□□ 1.15
FAM49B-208ENST00000518344 EEF2P13639 858 aaKnown RBP22.23■■□□□ 1.15
FAM49B-208ENST00000518344 HERVK_113P62684 666 aa22.23■■□□□ 1.15
FAM49B-208ENST00000518344 PDE4BQ07343 736 aa22.23■■□□□ 1.15
FAM49B-208ENST00000518344 TTC22Q5TAA0 569 aa22.23■■□□□ 1.15
FAM49B-208ENST00000518344 RPAP3Q9H6T3 665 aaPredicted RBP22.23■■□□□ 1.15
FAM49B-208ENST00000518344 SH2D4AQ9H788 454 aa22.23■■□□□ 1.15
FAM49B-208ENST00000518344 HIP1O00291 1037 aa22.22■■□□□ 1.15
FAM49B-208ENST00000518344 MFAP1P55081 439 aaKnown RBP22.22■■□□□ 1.15
FAM49B-208ENST00000518344 CTDSPL2Q05D32 466 aa22.22■■□□□ 1.15
FAM49B-208ENST00000518344 FAM110CQ1W6H9 321 aa22.22■■□□□ 1.15
FAM49B-208ENST00000518344 CATSPERGQ6ZRH7 1159 aa22.22■■□□□ 1.15
FAM49B-208ENST00000518344 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.22■■□□□ 1.15
FAM49B-208ENST00000518344 SRRDQ9UH36 339 aa22.22■■□□□ 1.15
FAM49B-208ENST00000518344 TMX2Q9Y320 296 aa22.22■■□□□ 1.15
FAM49B-208ENST00000518344 CCDC171Q6TFL3 1326 aa22.22■■□□□ 1.15
FAM49B-208ENST00000518344 TNPO2O14787 897 aaKnown RBP22.21■■□□□ 1.15
FAM49B-208ENST00000518344 PEX10O60683 326 aa22.21■■□□□ 1.15
FAM49B-208ENST00000518344 FGAP02671 866 aa22.21■■□□□ 1.15
FAM49B-208ENST00000518344 HSPD1P10809 573 aaKnown RBP22.21■■□□□ 1.15
FAM49B-208ENST00000518344 GSPT1P15170 499 aaKnown RBP22.21■■□□□ 1.15
FAM49B-208ENST00000518344 ALX1Q15699 326 aa22.21■■□□□ 1.15
FAM49B-208ENST00000518344 PAGR1Q9BTK6 254 aa22.21■■□□□ 1.15
FAM49B-208ENST00000518344 MYPNQ86TC9 1320 aa22.21■■□□□ 1.15
FAM49B-208ENST00000518344 RAD21O60216 631 aa22.2■■□□□ 1.14
FAM49B-208ENST00000518344 PRMT2P55345 433 aa22.2■■□□□ 1.14
FAM49B-208ENST00000518344 FAM47AQ5JRC9 791 aa22.2■■□□□ 1.14
FAM49B-208ENST00000518344 KIAA1755Q5JYT7 1200 aa22.2■■□□□ 1.14
FAM49B-208ENST00000518344 SPICE1Q8N0Z3 855 aa22.2■■□□□ 1.14
FAM49B-208ENST00000518344 GPRC5AQ8NFJ5 357 aa22.2■■□□□ 1.14
FAM49B-208ENST00000518344 TANGO6Q9C0B7 1094 aa22.2■■□□□ 1.14
FAM49B-208ENST00000518344 VCPKMTQ9H867 229 aa22.2■■□□□ 1.14
FAM49B-208ENST00000518344 SOX10P56693 466 aa22.19■■□□□ 1.14
FAM49B-208ENST00000518344 PRKCZQ05513 592 aa22.19■■□□□ 1.14
FAM49B-208ENST00000518344 SLC9C1Q4G0N8 1177 aa22.19■■□□□ 1.14
FAM49B-208ENST00000518344 RAET1EQ8TD07 263 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms